RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 MTA1Q13330 715 aa9.48□□□□□ -0.89
CLN5-217ENST00000637278 ORAI2Q96SN7 254 aa9.48□□□□□ -0.89
CLN5-217ENST00000637278 MAF1Q9H063 256 aa9.48□□□□□ -0.89
CLN5-217ENST00000637278 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
CLN5-217ENST00000637278 TULP4Q9NRJ4 1543 aa9.47□□□□□ -0.89
CLN5-217ENST00000637278 HDAC1Q13547 482 aaPredicted RBP9.47□□□□□ -0.89
CLN5-217ENST00000637278 QTRT2Q9H974 415 aaKnown RBP9.47□□□□□ -0.89
CLN5-217ENST00000637278 PCDH12Q9NPG4 1184 aa9.47□□□□□ -0.89
CLN5-217ENST00000637278 MAP3K20Q9NYL2 800 aaKnown RBP9.47□□□□□ -0.89
CLN5-217ENST00000637278 TTF2Q9UNY4 1162 aaKnown RBP9.47□□□□□ -0.89
CLN5-217ENST00000637278 NDUFV2P19404 249 aa9.46□□□□□ -0.89
CLN5-217ENST00000637278 GYS2P54840 703 aa9.46□□□□□ -0.89
CLN5-217ENST00000637278 ANKRD23Q86SG2 305 aa9.46□□□□□ -0.89
CLN5-217ENST00000637278 UPF1Q92900 1129 aaKnown RBP eCLIP9.46□□□□□ -0.89
CLN5-217ENST00000637278 RAI14Q9P0K7 980 aa9.46□□□□□ -0.89
CLN5-217ENST00000637278 CAPN15O75808 1086 aa9.46□□□□□ -0.9
CLN5-217ENST00000637278 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.9
CLN5-217ENST00000637278 USP21Q9UK80 565 aa9.46□□□□□ -0.9
CLN5-217ENST00000637278 SPATA31A3Q5VYP0 1347 aa9.46□□□□□ -0.9
CLN5-217ENST00000637278 PLCH1Q4KWH8 1693 aa9.46□□□□□ -0.9
CLN5-217ENST00000637278 NUTM2GQ5VZR2 741 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 FAM126AQ9BYI3 521 aaPredicted RBP9.45□□□□□ -0.9
CLN5-217ENST00000637278 THRAP3Q9Y2W1 955 aaKnown RBP9.45□□□□□ -0.9
CLN5-217ENST00000637278 CTDP1Q9Y5B0 961 aaPredicted RBP9.45□□□□□ -0.9
CLN5-217ENST00000637278 ARHGEF28Q8N1W1 1705 aaKnown RBP9.45□□□□□ -0.9
CLN5-217ENST00000637278 TRPM3Q9HCF6 1732 aaPredicted RBP9.45□□□□□ -0.9
CLN5-217ENST00000637278 ANP32CO43423 234 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
CLN5-217ENST00000637278 SLC20A2Q08357 652 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 CDHR5Q9HBB8 845 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 PLEKHH1Q9ULM0 1364 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 SLIT2O94813 1529 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 PDIA6Q15084 440 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 NRBP1Q9UHY1 535 aa9.45□□□□□ -0.9
CLN5-217ENST00000637278 CT47A1Q5JQC4 288 aaPredicted RBP9.44□□□□□ -0.9
CLN5-217ENST00000637278 ALS2Q96Q42 1657 aa9.44□□□□□ -0.9
CLN5-217ENST00000637278 OSBPP22059 807 aa9.44□□□□□ -0.9
CLN5-217ENST00000637278 WDR78Q5VTH9 848 aa9.44□□□□□ -0.9
CLN5-217ENST00000637278 DDX17Q92841 729 aaKnown RBP9.44□□□□□ -0.9
CLN5-217ENST00000637278 SETDB2Q96T68 719 aa9.44□□□□□ -0.9
CLN5-217ENST00000637278 RGPD8O14715 1765 aaPredicted RBP9.44□□□□□ -0.9
CLN5-217ENST00000637278 COL14A1Q05707 1796 aaKnown RBP9.44□□□□□ -0.9
CLN5-217ENST00000637278 ATP7BP35670 1465 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 ADAMTS2O95450 1211 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 PDE4AP27815 886 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 LRRC41Q15345 812 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 SYCP2LQ5T4T6 812 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 WAPLQ7Z5K2 1190 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 METTL16Q86W50 562 aaKnown RBP9.43□□□□□ -0.9
CLN5-217ENST00000637278 CGNQ9P2M7 1197 aaKnown RBP9.43□□□□□ -0.9
CLN5-217ENST00000637278 CCDC85CA6NKD9 419 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 NRDCO43847 1150 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 ZKSCAN8Q15776 578 aaPredicted RBP9.43□□□□□ -0.9
CLN5-217ENST00000637278 ZKSCAN2Q63HK3 967 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 MSL3Q8N5Y2 521 aaKnown RBP9.43□□□□□ -0.9
CLN5-217ENST00000637278 POGKQ9P215 609 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 BCL9LQ86UU0 1499 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 GPRASP1Q5JY77 1395 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 TOPAZ1Q8N9V7 1692 aa9.43□□□□□ -0.9
CLN5-217ENST00000637278 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
CLN5-217ENST00000637278 TMEM132EQ6IEE7 984 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 IER2Q9BTL4 223 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 CENPOQ9BU64 300 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 FOXO3O43524 673 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 TPM2P07951 284 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 ZSCAN20P17040 1043 aaPredicted RBP9.42□□□□□ -0.9
CLN5-217ENST00000637278 C4orf46Q504U0 113 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 CRTC2Q53ET0 693 aaPredicted RBP9.42□□□□□ -0.9
CLN5-217ENST00000637278 KRT28Q7Z3Y7 464 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 CEP83Q9Y592 693 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 MPHOSPH10O00566 681 aaKnown RBP9.42□□□□□ -0.9
CLN5-217ENST00000637278 S100BP04271 92 aaPredicted RBP9.42□□□□□ -0.9
CLN5-217ENST00000637278 TTC30BQ8N4P2 665 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 GJD4Q96KN9 370 aaPredicted RBP9.42□□□□□ -0.9
CLN5-217ENST00000637278 PRAM1Q96QH2 718 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 WWC3Q9ULE0 1092 aa9.42□□□□□ -0.9
CLN5-217ENST00000637278 NRAPQ86VF7 1730 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 CRYBG1Q9Y4K1 1723 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 DYTNA2CJ06 578 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 ATG7O95352 703 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 C10orf62Q5T681 223 aaPredicted RBP9.41□□□□□ -0.9
CLN5-217ENST00000637278 H3BRB1 525 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 ATP2B1P20020 1258 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 CCT2P78371 535 aaKnown RBP9.41□□□□□ -0.9
CLN5-217ENST00000637278 HIC1Q14526 733 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 NOP9Q86U38 636 aaKnown RBP9.41□□□□□ -0.9
CLN5-217ENST00000637278 CXorf38Q8TB03 319 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 FRAT1Q92837 279 aaPredicted RBP9.41□□□□□ -0.9
CLN5-217ENST00000637278 TUT1Q9H6E5 874 aaKnown RBP9.41□□□□□ -0.9
CLN5-217ENST00000637278 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
CLN5-217ENST00000637278 BRD4O60885 1362 aaPredicted RBP9.4□□□□□ -0.9
CLN5-217ENST00000637278 GLI3P10071 1580 aa9.4□□□□□ -0.9
CLN5-217ENST00000637278 LETM1O95202 739 aaPredicted RBP9.4□□□□□ -0.9
CLN5-217ENST00000637278 AMPD3Q01432 767 aa9.4□□□□□ -0.9
CLN5-217ENST00000637278 PPP1R15BQ5SWA1 713 aa9.4□□□□□ -0.9
CLN5-217ENST00000637278 PODNQ7Z5L7 613 aa9.4□□□□□ -0.9
CLN5-217ENST00000637278 UNC5CLQ8IV45 518 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms