RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 NID1P14543 1247 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 GATA4P43694 442 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 PTK7Q13308 1070 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 KANK4Q5T7N3 995 aaPredicted RBP3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 C20orf204Q6ZNR8 217 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 ZNF280CQ8ND82 737 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 CALR3Q96L12 384 aaKnown RBP3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 NACC1Q96RE7 527 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 PPP1R12CQ9BZL4 782 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 C11orf16Q9NQ32 467 aa3.4□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L15C9J2P7 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L10C9JJH3 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L13C9JLJ4 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L12C9JPN9 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L11C9JVI0 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L21D6R901 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L18D6R9N7 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L22D6RA61 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L17D6RBQ6 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L19D6RCP7 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L20D6RJB6 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 USP17L24Q0WX57 530 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 TRIM28Q13263 835 aaKnown RBP3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 CRTC2Q53ET0 693 aaPredicted RBP3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 XP32Q5T750 250 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 ANKMY2Q8IV38 441 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 BHMTQ93088 406 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 VRTNQ9H8Y1 702 aa3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 DMGDHQ9UI17 866 aaKnown RBP3.39□□□□□ -1.87
SYNGAP1-220ENST00000637194 FOXO3O43524 673 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 LILRB5O75023 590 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 EPB42P16452 691 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 DPYDQ12882 1025 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 CCINQ13939 588 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 PCSK7Q16549 785 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 RAB44Q7Z6P3 723 aaPredicted RBP3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 CHMP7Q8WUX9 453 aaPredicted RBP3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 HINFPQ9BQA5 517 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 GSX2Q9BZM3 304 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 SLC6A14Q9UN76 642 aa3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.38□□□□□ -1.87
SYNGAP1-220ENST00000637194 MAP3K6O95382 1288 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 ELNP15502 786 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 LMOD1P29536 600 aaPredicted RBP3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 WEE1P30291 646 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 DOC2BQ14184 412 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 RSPO4Q2I0M5 234 aaPredicted RBP3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 NKAPLQ5M9Q1 402 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 C8orf86Q6ZUL3 223 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 ILDR2Q71H61 639 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 MYO19Q96H55 970 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 NGLY1Q96IV0 654 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 ARXQ96QS3 562 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 UBE2OQ9C0C9 1292 aaKnown RBP3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 DNAJB12Q9NXW2 375 aaKnown RBP3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 BCS1LQ9Y276 419 aa3.37□□□□□ -1.87
SYNGAP1-220ENST00000637194 A0A0A0MRY4 1105 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 C9orf172C9J069 976 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 ITGB7P26010 798 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 INPP5BP32019 993 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 IDH3AP50213 366 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 ARSDP51689 593 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 RAC1P63000 192 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 NRG1Q02297 640 aaPredicted RBP3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 TRAPPC3LQ5T215 181 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 Q8N3U1 123 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 PNMA5Q96PV4 448 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 SEMA6BQ9H3T3 888 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 TPSG1Q9NRR2 321 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 FRRS1LQ9P0K9 344 aa3.36□□□□□ -1.87
SYNGAP1-220ENST00000637194 FAM229AH3BQW9 127 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 EGFRP00533 1210 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 NFKB1P19838 968 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 GRNP28799 593 aaKnown RBP3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 ARID4AP29374 1257 aaPredicted RBP3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 AFF1P51825 1210 aaKnown RBP3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 ADGRE1Q14246 886 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 C11orf91Q3C1V1 193 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 CFAP70Q5T0N1 1121 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 PSAPL1Q6NUJ1 521 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 DTWD1Q8N5C7 304 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 FAM200AQ8TCP9 573 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 TRPM4Q8TD43 1214 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 TTC9Q92623 222 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 LENG1Q96BZ8 264 aaPredicted RBP3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 QTRT2Q9H974 415 aaKnown RBP3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 JPH1Q9HDC5 661 aaPredicted RBP3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 NAGPAQ9UK23 515 aa3.35□□□□□ -1.87
SYNGAP1-220ENST00000637194 DYRK3O43781 588 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 RGS9O75916 674 aaPredicted RBP3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 MICAL2O94851 1124 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 H2AFB1P0C5Y9 115 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 H2AFB2P0C5Z0 115 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 SELPP16109 830 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 GPLD1P80108 840 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 TBC1D8BQ0IIM8 1120 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 DGKZQ13574 1117 aa3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 ELOAQ14241 798 aaKnown RBP3.34□□□□□ -1.87
SYNGAP1-220ENST00000637194 MBTPS1Q14703 1052 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms