RNA–Protein interactions for RNA: ENST00000636559.1

SMARCA2-252, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 2 BASIC

Gene SMARCA2, Length 6,853 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-252ENST00000636559 HLA-DOAP06340 250 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 SDSP20132 328 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 GJB2P29033 226 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 IL15P40933 162 aaPredicted RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 IARSP41252 1262 aaKnown RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 KRI1Q8N9T8 703 aaKnown RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 KAT14Q9H8E8 782 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 SEPT11Q9NVA2 429 aaKnown RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 PCDHB15Q9Y5E8 787 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 TTLL12Q14166 644 aaPredicted RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 CCDC181Q5TID7 509 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 ANO10Q9NW15 660 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 PPP1R12BO60237 982 aaPredicted RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 CCDC144CPQ8IYA2 1237 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 FAM177A1Q8N128 213 aaPredicted RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 LINS1Q8NG48 757 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 UTP14AQ9BVJ6 771 aaKnown RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 MAP3K19Q56UN5 1328 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 SSFA2P28290 1259 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 PDE1AP54750 535 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 DZIP3Q86Y13 1208 aaKnown RBP9□□□□□ -0.97
SMARCA2-252ENST00000636559 KAT6BQ8WYB5 2073 aa9□□□□□ -0.97
SMARCA2-252ENST00000636559 PAF1Q8N7H5 531 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 CCDC12Q8WUD4 166 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 PHACTR3Q96KR7 559 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 METAP2P50579 478 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 MICU3Q86XE3 530 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 EHMT1Q9H9B1 1298 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 CEP170Q5SW79 1584 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 WDHD1O75717 1129 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 CABP5Q9NP86 173 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 PCDH11XQ9BZA7 1347 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 PCDH11YQ9BZA8 1340 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 VAMP4O75379 141 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 FEZ1Q99689 392 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 ERLIN2O94905 339 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 MCM5P33992 734 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 SLC4A8Q2Y0W8 1093 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 ZGPATQ8N5A5 531 aaKnown RBP8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 NYXQ9GZU5 481 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 RNMTO43148 476 aaKnown RBP8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 STX6O43752 255 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 ADGRL2O95490 1459 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 CYP7A1P22680 504 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 KLHL10Q6JEL2 608 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 TSPYL6Q8N831 410 aa8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 ZNF397Q8NF99 534 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 ORC3Q9UBD5 711 aaPredicted RBP8.99□□□□□ -0.97
SMARCA2-252ENST00000636559 TSG101Q99816 390 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 CTAGE5O15320 804 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 EPB41L2O43491 1005 aaKnown RBP8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 MTERF4Q7Z6M4 381 aaKnown RBP8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 TBC1D32Q96NH3 1257 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 CCDC112Q8NEF3 446 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 TNPO1Q92973 898 aaKnown RBP8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 VAT1LQ9HCJ6 419 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 UHRF1BP1Q6BDS2 1440 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 CNNM3Q8NE01 707 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 COL17A1Q9UMD9 1497 aaPredicted RBP8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 SKIDA1Q1XH10 827 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 LMTK3Q96Q04 1460 aa8.98□□□□□ -0.97
SMARCA2-252ENST00000636559 MYO1BO43795 1136 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 MCMDC2Q4G0Z9 681 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 WDR78Q5VTH9 848 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 PPP4R3AQ6IN85 833 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 KRT23Q9C075 422 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 FBXO3Q9UK99 471 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 IQSEC3Q9UPP2 1182 aaPredicted RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 EDC4Q6P2E9 1401 aaKnown RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 BAG4O95429 457 aaKnown RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 KRT24Q2M2I5 525 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 FSIP1Q8NA03 581 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 SLC26A6Q9BXS9 759 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 PA2G4Q9UQ80 394 aaKnown RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 RTCBQ9Y3I0 505 aaKnown RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 CWF19L2Q2TBE0 894 aaKnown RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 KIAA1328Q86T90 577 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 IL27Q8NEV9 243 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 BTG4Q9NY30 223 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 SLC4A4Q9Y6R1 1079 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 WTAPQ15007 396 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 TPTE2Q6XPS3 522 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 RAB11FIP4Q86YS3 637 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 TFIP11Q9UBB9 837 aaKnown RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 SOS1Q07889 1333 aaPredicted RBP8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 ESYT1Q9BSJ8 1104 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 UBA5Q9GZZ9 404 aa8.97□□□□□ -0.97
SMARCA2-252ENST00000636559 FKBP15Q5T1M5 1219 aa8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 NAA16Q6N069 864 aaPredicted RBP8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 DDX19AQ9NUU7 478 aaKnown RBP8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 SLC9C2Q5TAH2 1124 aa8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 CNNM2Q9H8M5 875 aa8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 TCP11L1Q9NUJ3 509 aa8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 STX8Q9UNK0 236 aa8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 RBM8AQ9Y5S9 174 aaKnown RBP8.96□□□□□ -0.97
SMARCA2-252ENST00000636559 SBNO1A3KN83 1393 aa8.96□□□□□ -0.98
SMARCA2-252ENST00000636559 KLF18A0A0U1RQI7 1052 aa8.96□□□□□ -0.98
SMARCA2-252ENST00000636559 IRS4O14654 1257 aaPredicted RBP8.96□□□□□ -0.98
SMARCA2-252ENST00000636559 FGFR1OPO95684 399 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms