RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 CSPP1Q1MSJ5 1256 aa9.84□□□□□ -0.83
PCCA-212ENST00000636420 ANP32BQ92688 251 aaKnown RBP9.84□□□□□ -0.83
PCCA-212ENST00000636420 C22orf23Q9BZE7 217 aa9.84□□□□□ -0.83
PCCA-212ENST00000636420 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
PCCA-212ENST00000636420 ZNF831Q5JPB2 1677 aa9.84□□□□□ -0.83
PCCA-212ENST00000636420 PASKQ96RG2 1323 aa9.84□□□□□ -0.83
PCCA-212ENST00000636420 NFKBIEO00221 500 aa9.83□□□□□ -0.84
PCCA-212ENST00000636420 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
PCCA-212ENST00000636420 UTP14CQ5TAP6 766 aaKnown RBP9.83□□□□□ -0.84
PCCA-212ENST00000636420 RC3H1Q5TC82 1133 aaKnown RBP9.83□□□□□ -0.84
PCCA-212ENST00000636420 PRDM4Q9UKN5 801 aa9.83□□□□□ -0.84
PCCA-212ENST00000636420 CNTNAP4Q9C0A0 1308 aa9.83□□□□□ -0.84
PCCA-212ENST00000636420 DYNC1I1O14576 645 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 RPS6KA4O75676 772 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 ZNF445P59923 1031 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 KIAA1211Q6ZU35 1233 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 CFAP44Q96MT7 982 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 SRP68Q9UHB9 627 aaKnown RBP9.82□□□□□ -0.84
PCCA-212ENST00000636420 PDZRN3Q9UPQ7 1066 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 ADAMTS7Q9UKP4 1686 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 MYH14Q7Z406 1995 aaKnown RBP9.82□□□□□ -0.84
PCCA-212ENST00000636420 GOLGA6L22H0YM25 854 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 BCAR3O75815 825 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
PCCA-212ENST00000636420 CNGB1Q14028 1251 aaPredicted RBP9.82□□□□□ -0.84
PCCA-212ENST00000636420 KLHL40Q2TBA0 621 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 HSP90AB2PQ58FF8 381 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 AIDAQ96BJ3 306 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 COG3Q96JB2 828 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 TERF2IPQ9NYB0 399 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 TMOD3Q9NYL9 352 aa9.82□□□□□ -0.84
PCCA-212ENST00000636420 TNRC18O15417 2968 aaPredicted RBP9.81□□□□□ -0.84
PCCA-212ENST00000636420 USP42Q9H9J4 1324 aaKnown RBP9.81□□□□□ -0.84
PCCA-212ENST00000636420 POLRMTO00411 1230 aaKnown RBP9.81□□□□□ -0.84
PCCA-212ENST00000636420 NCLP19338 710 aaKnown RBP9.81□□□□□ -0.84
PCCA-212ENST00000636420 RFC4P35249 363 aa9.81□□□□□ -0.84
PCCA-212ENST00000636420 PDLIM2Q96JY6 352 aa9.81□□□□□ -0.84
PCCA-212ENST00000636420 CCDC85CA6NKD9 419 aa9.8□□□□□ -0.84
PCCA-212ENST00000636420 TM4SF1P30408 202 aa9.8□□□□□ -0.84
PCCA-212ENST00000636420 WWC1Q8IX03 1113 aa9.8□□□□□ -0.84
PCCA-212ENST00000636420 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
PCCA-212ENST00000636420 NOL7Q9UMY1 257 aaKnown RBP9.8□□□□□ -0.84
PCCA-212ENST00000636420 DLEC1Q9Y238 1755 aa9.79□□□□□ -0.84
PCCA-212ENST00000636420 APAF1O14727 1248 aa9.79□□□□□ -0.84
PCCA-212ENST00000636420 ITGBL1O95965 494 aaPredicted RBP9.79□□□□□ -0.84
PCCA-212ENST00000636420 MSNP26038 577 aaKnown RBP9.79□□□□□ -0.84
PCCA-212ENST00000636420 MVPQ14764 893 aaKnown RBP9.79□□□□□ -0.84
PCCA-212ENST00000636420 PCDHB15Q9Y5E8 787 aa9.79□□□□□ -0.84
PCCA-212ENST00000636420 THSD7BQ9C0I4 1608 aa9.79□□□□□ -0.84
PCCA-212ENST00000636420 NRXN2Q9P2S2 1712 aa9.78□□□□□ -0.84
PCCA-212ENST00000636420 RASSF10A6NK89 507 aa9.78□□□□□ -0.84
PCCA-212ENST00000636420 PHKG2P15735 406 aa9.78□□□□□ -0.84
PCCA-212ENST00000636420 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
PCCA-212ENST00000636420 NASPP49321 788 aaPredicted RBP9.78□□□□□ -0.84
PCCA-212ENST00000636420 RIPK4P57078 832 aa9.78□□□□□ -0.84
PCCA-212ENST00000636420 TNPO1Q92973 898 aaKnown RBP9.78□□□□□ -0.84
PCCA-212ENST00000636420 PUS7Q96PZ0 661 aaKnown RBP9.78□□□□□ -0.84
PCCA-212ENST00000636420 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
PCCA-212ENST00000636420 COG6Q9Y2V7 657 aa9.78□□□□□ -0.84
PCCA-212ENST00000636420 CCDC88AQ3V6T2 1871 aa9.78□□□□□ -0.84
PCCA-212ENST00000636420 FLT4P35916 1363 aa9.77□□□□□ -0.84
PCCA-212ENST00000636420 FYB1O15117 783 aa9.77□□□□□ -0.85
PCCA-212ENST00000636420 LHX8Q68G74 356 aa9.77□□□□□ -0.85
PCCA-212ENST00000636420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.77□□□□□ -0.856e-7■■□□□ 12.2
PCCA-212ENST00000636420 KIF24Q5T7B8 1368 aa9.77□□□□□ -0.85
PCCA-212ENST00000636420 PDE4DIPQ5VU43 2346 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 ADAMTSL1Q8N6G6 1762 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 TMEM88BA6NKF7 163 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 HSP90AB1P08238 724 aaKnown RBP9.76□□□□□ -0.85
PCCA-212ENST00000636420 BMP2KLQ5H9B9 411 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 PANK1Q8TE04 598 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 RUNDC1Q96C34 613 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 SPG7Q9UQ90 795 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 CARMIL3Q8ND23 1372 aa9.76□□□□□ -0.85
PCCA-212ENST00000636420 IL16Q14005 1332 aa9.75□□□□□ -0.85
PCCA-212ENST00000636420 DDNO94850 711 aaPredicted RBP9.75□□□□□ -0.85
PCCA-212ENST00000636420 CRKLP46109 303 aaKnown RBP9.75□□□□□ -0.85
PCCA-212ENST00000636420 ZKSCAN2Q63HK3 967 aa9.75□□□□□ -0.85
PCCA-212ENST00000636420 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
PCCA-212ENST00000636420 PAXIP1Q6ZW49 1069 aaPredicted RBP9.75□□□□□ -0.85
PCCA-212ENST00000636420 GAS2L3Q86XJ1 694 aa9.75□□□□□ -0.85
PCCA-212ENST00000636420 GZF1Q9H116 711 aaPredicted RBP9.75□□□□□ -0.85
PCCA-212ENST00000636420 GGNBP2Q9H3C7 697 aa9.75□□□□□ -0.85
PCCA-212ENST00000636420 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
PCCA-212ENST00000636420 DDX19BQ9UMR2 479 aa9.75□□□□□ -0.85
PCCA-212ENST00000636420 AFDNP55196 1824 aaKnown RBP9.75□□□□□ -0.85
PCCA-212ENST00000636420 DICER1Q9UPY3 1922 aaKnown RBP9.75□□□□□ -0.85
PCCA-212ENST00000636420 TJP1Q07157 1748 aa9.75□□□□□ -0.85
PCCA-212ENST00000636420 RGL2O15211 777 aa9.74□□□□□ -0.85
PCCA-212ENST00000636420 SASS6Q6UVJ0 657 aa9.74□□□□□ -0.85
PCCA-212ENST00000636420 LDHDQ86WU2 507 aa9.74□□□□□ -0.85
PCCA-212ENST00000636420 IFNL2Q8IZJ0 200 aa9.74□□□□□ -0.85
PCCA-212ENST00000636420 TTLL6Q8N841 843 aa9.74□□□□□ -0.85
PCCA-212ENST00000636420 ZKSCAN5Q9Y2L8 839 aa9.74□□□□□ -0.85
PCCA-212ENST00000636420 LTBP1Q14766 1721 aa9.74□□□□□ -0.85
PCCA-212ENST00000636420 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
PCCA-212ENST00000636420 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
PCCA-212ENST00000636420 BRPF1P55201 1214 aaPredicted RBP9.73□□□□□ -0.85
PCCA-212ENST00000636420 NUCB2P80303 420 aa9.73□□□□□ -0.85
PCCA-212ENST00000636420 MAP2K1Q02750 393 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms