RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 MX1P20591 662 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 GUCY2CP25092 1073 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 ERO1AQ96HE7 468 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 CWC15Q9P013 229 aaKnown RBP12.76□□□□□ -0.37
CHD2-223ENST00000636306 TNNT1P13805 278 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 FLIIQ13045 1269 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 KMT5BQ4FZB7 885 aa12.76□□□□□ -0.37
CHD2-223ENST00000636306 ZGPATQ8N5A5 531 aaKnown RBP12.76□□□□□ -0.37
CHD2-223ENST00000636306 XIRP1Q702N8 1843 aaKnown RBP12.75□□□□□ -0.37
CHD2-223ENST00000636306 HDGFL1Q5TGJ6 251 aa12.75□□□□□ -0.37
CHD2-223ENST00000636306 GOLGA6L1Q8N7Z2 621 aa12.75□□□□□ -0.37
CHD2-223ENST00000636306 INTS4Q96HW7 963 aaKnown RBP12.75□□□□□ -0.37
CHD2-223ENST00000636306 MIS18AQ9NYP9 233 aa12.75□□□□□ -0.37
CHD2-223ENST00000636306 PXDNQ92626 1479 aa12.75□□□□□ -0.37
CHD2-223ENST00000636306 COL18A1P39060 1754 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 SCN11AQ9UI33 1791 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 GNAI2P04899 355 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 TPM4P67936 248 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 RBM6P78332 1123 aaKnown RBP12.74□□□□□ -0.37
CHD2-223ENST00000636306 CEP85Q6P2H3 762 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 CEP120Q8N960 986 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 PKD1L3Q7Z443 1732 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 PARP4Q9UKK3 1724 aaKnown RBP12.74□□□□□ -0.37
CHD2-223ENST00000636306 ERBB3P21860 1342 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 CUL4AQ13619 759 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 DHX37Q8IY37 1157 aaKnown RBP12.74□□□□□ -0.37
CHD2-223ENST00000636306 MPNDQ8N594 471 aa12.74□□□□□ -0.37
CHD2-223ENST00000636306 LOC102724159A0A0B4J2E5 919 aa12.73□□□□□ -0.37
CHD2-223ENST00000636306 PWP2Q15269 919 aaKnown RBP12.73□□□□□ -0.37
CHD2-223ENST00000636306 SLC4A10Q6U841 1118 aa12.73□□□□□ -0.37
CHD2-223ENST00000636306 RAPGEF4Q8WZA2 1011 aa12.73□□□□□ -0.37
CHD2-223ENST00000636306 FUCA2Q9BTY2 467 aa12.73□□□□□ -0.37
CHD2-223ENST00000636306 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
CHD2-223ENST00000636306 CPDO75976 1380 aa12.72□□□□□ -0.37
CHD2-223ENST00000636306 HCLS1P14317 486 aaPredicted RBP12.72□□□□□ -0.37
CHD2-223ENST00000636306 GPS2Q13227 327 aa12.72□□□□□ -0.37
CHD2-223ENST00000636306 CASC1Q6TDU7 716 aa12.72□□□□□ -0.37
CHD2-223ENST00000636306 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.72□□□□□ -0.37
CHD2-223ENST00000636306 MEIS3Q99687 375 aa12.72□□□□□ -0.37
CHD2-223ENST00000636306 V9GYY5 206 aaPredicted RBP12.72□□□□□ -0.37
CHD2-223ENST00000636306 BTBD11A6QL63 1104 aa12.71□□□□□ -0.37
CHD2-223ENST00000636306 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.37
CHD2-223ENST00000636306 ATP8B1O43520 1251 aa12.71□□□□□ -0.37
CHD2-223ENST00000636306 EIF4A1P60842 406 aaKnown RBP12.71□□□□□ -0.37
CHD2-223ENST00000636306 LRRC59Q96AG4 307 aaKnown RBP12.71□□□□□ -0.37
CHD2-223ENST00000636306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.71□□□□□ -0.372e-8■■■□□ 17
CHD2-223ENST00000636306 SPG7Q9UQ90 795 aa12.71□□□□□ -0.37
CHD2-223ENST00000636306 STRCQ7RTU9 1775 aa12.71□□□□□ -0.38
CHD2-223ENST00000636306 TATP17735 454 aaPredicted RBP12.71□□□□□ -0.38
CHD2-223ENST00000636306 NOM1Q5C9Z4 860 aaKnown RBP12.71□□□□□ -0.38
CHD2-223ENST00000636306 CEP135Q66GS9 1140 aa12.71□□□□□ -0.38
CHD2-223ENST00000636306 USP48Q86UV5 1035 aa12.71□□□□□ -0.38
CHD2-223ENST00000636306 TRERF1Q96PN7 1200 aa12.71□□□□□ -0.38
CHD2-223ENST00000636306 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
CHD2-223ENST00000636306 KIF2AO00139 706 aaPredicted RBP12.7□□□□□ -0.38
CHD2-223ENST00000636306 MYO1CO00159 1063 aa12.7□□□□□ -0.38
CHD2-223ENST00000636306 FBXO38Q6PIJ6 1188 aa12.7□□□□□ -0.38
CHD2-223ENST00000636306 G2E3Q7L622 706 aa12.7□□□□□ -0.38
CHD2-223ENST00000636306 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
CHD2-223ENST00000636306 MRC1P22897 1456 aa12.7□□□□□ -0.38
CHD2-223ENST00000636306 SPATA31A3Q5VYP0 1347 aa12.7□□□□□ -0.38
CHD2-223ENST00000636306 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
CHD2-223ENST00000636306 H2AFXP16104 143 aaPredicted RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 ZNF446Q9NWS9 450 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 CEP83Q9Y592 693 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 ABCA3Q99758 1704 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 NEMFO60524 1076 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 GADD45BO75293 160 aaPredicted RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 SLU7O95391 586 aaKnown RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 MYCNP04198 464 aaPredicted RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 UBTFL1P0CB47 393 aaPredicted RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 PTGS1P23219 599 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 UBE2HP62256 183 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 TPD52L1Q16890 204 aaPredicted RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 SYT10Q6XYQ8 523 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 ATG3Q9NT62 314 aa12.69□□□□□ -0.38
CHD2-223ENST00000636306 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
CHD2-223ENST00000636306 F6X3S4 739 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 CCDC172P0C7W6 258 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 NAA30Q147X3 362 aaPredicted RBP12.68□□□□□ -0.38
CHD2-223ENST00000636306 TTC22Q5TAA0 569 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 ZBTB9Q96C00 473 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 C16orf45Q96MC5 204 aaPredicted RBP12.68□□□□□ -0.38
CHD2-223ENST00000636306 SRCIN1Q9C0H9 1055 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 PSD3Q9NYI0 1048 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 LAMB4A4D0S4 1761 aa12.68□□□□□ -0.38
CHD2-223ENST00000636306 AP5Z1O43299 807 aa12.67□□□□□ -0.38
CHD2-223ENST00000636306 KIF1CO43896 1103 aaKnown RBP12.67□□□□□ -0.38
CHD2-223ENST00000636306 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
CHD2-223ENST00000636306 GOLGA5Q8TBA6 731 aa12.67□□□□□ -0.38
CHD2-223ENST00000636306 TMX3Q96JJ7 454 aa12.67□□□□□ -0.38
CHD2-223ENST00000636306 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
CHD2-223ENST00000636306 KCND1Q9NSA2 647 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms