RNA–Protein interactions for RNA: ENST00000636193.1

SYNGAP1-213, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-213ENST00000636193 ARHGAP27Q6ZUM4 889 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 FRMD5Q7Z6J6 570 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 KRTAP1-3Q8IUG1 177 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 TBC1D16Q8TBP0 767 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 ARID3AQ99856 593 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 UBE2OQ9C0C9 1292 aaKnown RBP0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 SPRTNQ9H040 489 aaPredicted RBP0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 LRRC4CQ9HCJ2 640 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 AVENQ9NQS1 362 aaPredicted RBP0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 STK32BQ9NY57 414 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 IL17BQ9UHF5 180 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 ITGB1BP2Q9UKP3 347 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 EMILIN1Q9Y6C2 1016 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 COL4A5P29400 1685 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 ASTN2O75129 1339 aaPredicted RBP0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 SALL3Q9BXA9 1300 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 USP6P35125 1406 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 EEA1Q15075 1411 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 FGD5Q6ZNL6 1462 aa0.8□□□□□ -2.28
SYNGAP1-213ENST00000636193 ADAMTS20P59510 1910 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 SETD1BQ9UPS6 1966 aaKnown RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 CEP170BQ9Y4F5 1589 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 KIAA0100Q14667 2235 aaKnown RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 AXIN1O15169 862 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 DCXO43602 365 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 CR2P20023 1033 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 MAP3K9P80192 1104 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 FOXK1P85037 733 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 KHDRBS1Q07666 443 aaKnown RBP eCLIP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 PROX2Q3B8N5 592 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 HEATR6Q6AI08 1181 aaKnown RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 PTCRAQ6ISU1 281 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 MAML2Q8IZL2 1156 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 FNBP4Q8N3X1 1017 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 CMASQ8NFW8 434 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 GTF3C2Q8WUA4 911 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 HNRNPLLQ8WVV9 542 aaKnown RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 WNT8AQ9H1J5 351 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 CXXC1Q9P0U4 656 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 MAFBQ9Y5Q3 323 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 DISP2A7MBM2 1401 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 SNED1Q8TER0 1413 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 COL1A1P02452 1464 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 COL3A1P02461 1466 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 KCPQ6ZWJ8 1503 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 TECTAO75443 2155 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 GLI3P10071 1580 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 CADP27708 2225 aa0.79□□□□□ -2.28
SYNGAP1-213ENST00000636193 LRP4O75096 1905 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 SLC28A2O43868 658 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 TRPA1O75762 1119 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 VENTXO95231 258 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 CFHP08603 1231 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 NR1D1P20393 614 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 LORP23490 312 aaPredicted RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 PMLP29590 882 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 TFF2Q03403 129 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 CFHR1Q03591 330 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 SKIV2LQ15477 1246 aaKnown RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 NBPF9Q3BBW0 867 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 SP5Q6BEB4 398 aaPredicted RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 PRPF40BQ6NWY9 871 aaKnown RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 ESRP1Q6NXG1 681 aaKnown RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 POTEEQ6S8J3 1075 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 GJD3Q8N144 294 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 CSRNP3Q8WYN3 585 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 PBXIP1Q96AQ6 731 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 FAM84BQ96KN1 310 aaPredicted RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 GAS2L1Q99501 681 aaPredicted RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 GDF15Q99988 308 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 TNMDQ9H2S6 317 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 CCDC9Q9Y3X0 531 aaKnown RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 GPSM3Q9Y4H4 160 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 FRMPD4Q14CM0 1322 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 NID2Q14112 1375 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 ZMYM3Q14202 1370 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 SPTBN1Q01082 2364 aaKnown RBP0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 WDR62O43379 1518 aa0.78□□□□□ -2.28
SYNGAP1-213ENST00000636193 SPENQ96T58 3664 aaKnown RBP0.78□□□□□ -2.29
SYNGAP1-213ENST00000636193 LAMC3Q9Y6N6 1575 aa0.78□□□□□ -2.29
SYNGAP1-213ENST00000636193 VPS13CQ709C8 3753 aa0.78□□□□□ -2.29
SYNGAP1-213ENST00000636193 RNF17Q9BXT8 1623 aaKnown RBP0.78□□□□□ -2.29
SYNGAP1-213ENST00000636193 AHCTF1Q8WYP5 2266 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 FCGBPQ9Y6R7 5405 aaPredicted RBP0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 PRR5-ARHGAP8B1AHC4 643 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 ATXN7O15265 892 aaPredicted RBP0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 ITGB7P26010 798 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 GSK3AP49840 483 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 ARHGAP8P85298 464 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 ZXDBP98169 803 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 DEFA6Q01524 100 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 TMEM132AQ24JP5 1023 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 N4BP2L1Q5TBK1 243 aaPredicted RBP0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 TICAM1Q8IUC6 712 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 AFAP1Q8N556 730 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 NBPF3Q9H094 633 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 MRVI1Q9Y6F6 885 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 SALL1Q9NSC2 1324 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 PLEKHG2Q9H7P9 1386 aa0.77□□□□□ -2.29
SYNGAP1-213ENST00000636193 HEG1Q9ULI3 1381 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms