RNA–Protein interactions for RNA: ENST00000635963.1

EFHC1-211, Transcript of EF-hand domain containing 1, humanhuman

TSL 3

Gene EFHC1, Length 507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-211ENST00000635963 COPS6Q7L5N1 327 aa17.16■□□□□ 0.34
EFHC1-211ENST00000635963 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
EFHC1-211ENST00000635963 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
EFHC1-211ENST00000635963 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
EFHC1-211ENST00000635963 RNF123Q5XPI4 1314 aa17.16■□□□□ 0.34
EFHC1-211ENST00000635963 SLC10A5Q5PT55 438 aa17.15■□□□□ 0.34
EFHC1-211ENST00000635963 SCN4AP35499 1836 aa17.14■□□□□ 0.34
EFHC1-211ENST00000635963 ALDH1B1P30837 517 aa17.14■□□□□ 0.33
EFHC1-211ENST00000635963 FKBP4Q02790 459 aaKnown RBP eCLIP17.14■□□□□ 0.33
EFHC1-211ENST00000635963 FSTL1Q12841 308 aa17.14■□□□□ 0.33
EFHC1-211ENST00000635963 HDGFL1Q5TGJ6 251 aa17.14■□□□□ 0.33
EFHC1-211ENST00000635963 SLC51AQ86UW1 340 aa17.14■□□□□ 0.33
EFHC1-211ENST00000635963 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
EFHC1-211ENST00000635963 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
EFHC1-211ENST00000635963 ADAMTSL1Q8N6G6 1762 aa17.14■□□□□ 0.33
EFHC1-211ENST00000635963 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
EFHC1-211ENST00000635963 DUSP27Q5VZP5 1158 aa17.13■□□□□ 0.33
EFHC1-211ENST00000635963 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
EFHC1-211ENST00000635963 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
EFHC1-211ENST00000635963 COL4A1P02462 1669 aa17.13■□□□□ 0.33
EFHC1-211ENST00000635963 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
EFHC1-211ENST00000635963 HSP90AB3PQ58FF7 597 aa17.12■□□□□ 0.33
EFHC1-211ENST00000635963 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
EFHC1-211ENST00000635963 VEGFAP15692 232 aaPredicted RBP17.11■□□□□ 0.33
EFHC1-211ENST00000635963 APLP1P51693 650 aa17.11■□□□□ 0.33
EFHC1-211ENST00000635963 GNAI1P63096 354 aa17.11■□□□□ 0.33
EFHC1-211ENST00000635963 AIMP1Q12904 312 aaKnown RBP17.11■□□□□ 0.33
EFHC1-211ENST00000635963 RTKN2Q8IZC4 609 aa17.11■□□□□ 0.33
EFHC1-211ENST00000635963 PSMD1Q99460 953 aa17.11■□□□□ 0.33
EFHC1-211ENST00000635963 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
EFHC1-211ENST00000635963 DBF4Q9UBU7 674 aaPredicted RBP17.11■□□□□ 0.33
EFHC1-211ENST00000635963 TAF1P21675 1872 aa17.11■□□□□ 0.33
EFHC1-211ENST00000635963 DUOX1Q9NRD9 1551 aa17.11■□□□□ 0.33
EFHC1-211ENST00000635963 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
EFHC1-211ENST00000635963 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
EFHC1-211ENST00000635963 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
EFHC1-211ENST00000635963 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
EFHC1-211ENST00000635963 ZNF277Q9NRM2 450 aaPredicted RBP17.1■□□□□ 0.33
EFHC1-211ENST00000635963 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
EFHC1-211ENST00000635963 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
EFHC1-211ENST00000635963 C16orf71Q8IYS4 520 aaPredicted RBP17.09■□□□□ 0.33
EFHC1-211ENST00000635963 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
EFHC1-211ENST00000635963 DNAJC5GQ8N7S2 189 aa17.09■□□□□ 0.33
EFHC1-211ENST00000635963 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
EFHC1-211ENST00000635963 L3MBTL3Q96JM7 780 aaPredicted RBP17.09■□□□□ 0.33
EFHC1-211ENST00000635963 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
EFHC1-211ENST00000635963 ABCC4O15439 1325 aa17.08■□□□□ 0.32
EFHC1-211ENST00000635963 IARSP41252 1262 aaKnown RBP17.08■□□□□ 0.32
EFHC1-211ENST00000635963 NCBP3Q53F19 620 aaKnown RBP17.08■□□□□ 0.32
EFHC1-211ENST00000635963 DPY19L2Q6NUT2 758 aa17.08■□□□□ 0.32
EFHC1-211ENST00000635963 C8orf58Q8NAV2 365 aa17.08■□□□□ 0.32
EFHC1-211ENST00000635963 SMC1BQ8NDV3 1235 aa17.08■□□□□ 0.32
EFHC1-211ENST00000635963 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
EFHC1-211ENST00000635963 HYPKQ9NX55 129 aa17.08■□□□□ 0.32
EFHC1-211ENST00000635963 FZD9O00144 591 aa17.07■□□□□ 0.32
EFHC1-211ENST00000635963 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
EFHC1-211ENST00000635963 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
EFHC1-211ENST00000635963 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
EFHC1-211ENST00000635963 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
EFHC1-211ENST00000635963 SH3TC1Q8TE82 1336 aa17.06■□□□□ 0.32
EFHC1-211ENST00000635963 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
EFHC1-211ENST00000635963 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
EFHC1-211ENST00000635963 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
EFHC1-211ENST00000635963 WWC1Q8IX03 1113 aa17.05■□□□□ 0.32
EFHC1-211ENST00000635963 TRMT112Q9UI30 125 aaKnown RBP17.05■□□□□ 0.32
EFHC1-211ENST00000635963 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
EFHC1-211ENST00000635963 IL16Q14005 1332 aa17.04■□□□□ 0.32
EFHC1-211ENST00000635963 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
EFHC1-211ENST00000635963 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
EFHC1-211ENST00000635963 PCNTO95613 3336 aa17.04■□□□□ 0.32
EFHC1-211ENST00000635963 POTEIP0CG38 1075 aa17.03■□□□□ 0.32
EFHC1-211ENST00000635963 POTEJP0CG39 1038 aa17.03■□□□□ 0.32
EFHC1-211ENST00000635963 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
EFHC1-211ENST00000635963 RTFDC1Q9BY42 306 aaPredicted RBP17.03■□□□□ 0.32
EFHC1-211ENST00000635963 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
EFHC1-211ENST00000635963 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
EFHC1-211ENST00000635963 ELL2O00472 640 aaPredicted RBP17.02■□□□□ 0.32
EFHC1-211ENST00000635963 HTRA3P83110 453 aa17.02■□□□□ 0.32
EFHC1-211ENST00000635963 ANP32CO43423 234 aa17.01■□□□□ 0.31
EFHC1-211ENST00000635963 GRAPQ13588 217 aa17.01■□□□□ 0.31
EFHC1-211ENST00000635963 SF3B3Q15393 1217 aaKnown RBP17.01■□□□□ 0.31
EFHC1-211ENST00000635963 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
EFHC1-211ENST00000635963 TAF1DQ9H5J8 278 aaPredicted RBP17.01■□□□□ 0.31
EFHC1-211ENST00000635963 CACNA1FO60840 1977 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 IQCA1LA6NCM1 817 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 BBOX1O75936 387 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 SP8Q8IXZ3 490 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 GPC2Q8N158 579 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 ZNF428Q96B54 188 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 FAM89AQ96GI7 184 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 MYH3P11055 1940 aa17■□□□□ 0.31
EFHC1-211ENST00000635963 GOLGA2Q08379 1002 aa16.99■□□□□ 0.31
EFHC1-211ENST00000635963 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
EFHC1-211ENST00000635963 CHADLQ6NUI6 762 aa16.99■□□□□ 0.31
EFHC1-211ENST00000635963 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
EFHC1-211ENST00000635963 VPS33BQ9H267 617 aa16.99■□□□□ 0.31
EFHC1-211ENST00000635963 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
EFHC1-211ENST00000635963 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
EFHC1-211ENST00000635963 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
EFHC1-211ENST00000635963 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms