RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 BHMTQ93088 406 aa7.43□□□□□ -1.22
SCN1A-211ENST00000635893 NACC1Q96RE7 527 aa7.43□□□□□ -1.22
SCN1A-211ENST00000635893 MAFBQ9Y5Q3 323 aaPredicted RBP7.43□□□□□ -1.22
SCN1A-211ENST00000635893 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
SCN1A-211ENST00000635893 ITGB7P26010 798 aa7.42□□□□□ -1.22
SCN1A-211ENST00000635893 LARP1Q6PKG0 1096 aaKnown RBP7.42□□□□□ -1.22
SCN1A-211ENST00000635893 PROSER2Q86WR7 435 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-211ENST00000635893 CHMP7Q8WUX9 453 aaPredicted RBP7.42□□□□□ -1.22
SCN1A-211ENST00000635893 NGLY1Q96IV0 654 aa7.42□□□□□ -1.22
SCN1A-211ENST00000635893 LILRB5O75023 590 aa7.41□□□□□ -1.22
SCN1A-211ENST00000635893 IER5Q5VY09 327 aa7.41□□□□□ -1.22
SCN1A-211ENST00000635893 CLUAP1Q96AJ1 413 aa7.41□□□□□ -1.22
SCN1A-211ENST00000635893 UBE2OQ9C0C9 1292 aaKnown RBP7.41□□□□□ -1.22
SCN1A-211ENST00000635893 RTN1Q16799 776 aa7.4□□□□□ -1.22
SCN1A-211ENST00000635893 RSPO4Q2I0M5 234 aaPredicted RBP7.4□□□□□ -1.22
SCN1A-211ENST00000635893 TRAPPC3LQ5T215 181 aa7.4□□□□□ -1.22
SCN1A-211ENST00000635893 HINFPQ9BQA5 517 aa7.4□□□□□ -1.22
SCN1A-211ENST00000635893 TGFBR3LH3BV60 316 aa7.39□□□□□ -1.23
SCN1A-211ENST00000635893 TBC1D8BQ0IIM8 1120 aa7.39□□□□□ -1.23
SCN1A-211ENST00000635893 GRIK4Q16099 956 aa7.39□□□□□ -1.23
SCN1A-211ENST00000635893 TPSG1Q9NRR2 321 aa7.39□□□□□ -1.23
SCN1A-211ENST00000635893 SLC6A14Q9UN76 642 aa7.39□□□□□ -1.23
SCN1A-211ENST00000635893 IGFBP4P22692 258 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 DPYDQ12882 1025 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 PTK7Q13308 1070 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 CRTC2Q53ET0 693 aaPredicted RBP7.38□□□□□ -1.23
SCN1A-211ENST00000635893 NKAPLQ5M9Q1 402 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 CALR3Q96L12 384 aaKnown RBP7.38□□□□□ -1.23
SCN1A-211ENST00000635893 PNMA5Q96PV4 448 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 PPP1R12CQ9BZL4 782 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 GSX2Q9BZM3 304 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 IGFLR1Q9H665 355 aa7.38□□□□□ -1.23
SCN1A-211ENST00000635893 C9orf172C9J069 976 aa7.37□□□□□ -1.23
SCN1A-211ENST00000635893 CCINQ13939 588 aa7.37□□□□□ -1.23
SCN1A-211ENST00000635893 ZMYM1Q5SVZ6 1142 aa7.37□□□□□ -1.23
SCN1A-211ENST00000635893 KANK4Q5T7N3 995 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-211ENST00000635893 JPH1Q9HDC5 661 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-211ENST00000635893 DMGDHQ9UI17 866 aaKnown RBP7.37□□□□□ -1.23
SCN1A-211ENST00000635893 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.37□□□□□ -1.23
SCN1A-211ENST00000635893 FAM196BA6NMK8 535 aa7.36□□□□□ -1.23
SCN1A-211ENST00000635893 ELNP15502 786 aa7.36□□□□□ -1.23
SCN1A-211ENST00000635893 EPB42P16452 691 aa7.36□□□□□ -1.23
SCN1A-211ENST00000635893 RAC1P63000 192 aa7.36□□□□□ -1.23
SCN1A-211ENST00000635893 ANKMY2Q8IV38 441 aa7.36□□□□□ -1.23
SCN1A-211ENST00000635893 NUDT8Q8WV74 236 aa7.36□□□□□ -1.23
SCN1A-211ENST00000635893 DNAJB12Q9NXW2 375 aaKnown RBP7.36□□□□□ -1.23
SCN1A-211ENST00000635893 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
SCN1A-211ENST00000635893 A0A0A0MRY4 1105 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 A6NJR5 290 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L15C9J2P7 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L10C9JJH3 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L13C9JLJ4 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L12C9JPN9 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L11C9JVI0 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L21D6R901 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L18D6R9N7 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L22D6RA61 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L17D6RBQ6 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L19D6RCP7 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L20D6RJB6 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 NFKB1P19838 968 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 USP17L24Q0WX57 530 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 PCSK7Q16549 785 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 PSAPL1Q6NUJ1 521 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 VRTNQ9H8Y1 702 aa7.35□□□□□ -1.23
SCN1A-211ENST00000635893 DYRK3O43781 588 aa7.34□□□□□ -1.23
SCN1A-211ENST00000635893 LGR5O75473 907 aa7.34□□□□□ -1.23
SCN1A-211ENST00000635893 SELPP16109 830 aa7.34□□□□□ -1.23
SCN1A-211ENST00000635893 AFF1P51825 1210 aaKnown RBP7.34□□□□□ -1.23
SCN1A-211ENST00000635893 NRG1Q02297 640 aaPredicted RBP7.34□□□□□ -1.23
SCN1A-211ENST00000635893 ADGRE1Q14246 886 aa7.34□□□□□ -1.23
SCN1A-211ENST00000635893 TMEM132AQ24JP5 1023 aa7.34□□□□□ -1.23
SCN1A-211ENST00000635893 NAGPAQ9UK23 515 aa7.34□□□□□ -1.23
SCN1A-211ENST00000635893 RGS9O75916 674 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-211ENST00000635893 MAP3K6O95382 1288 aa7.33□□□□□ -1.24
SCN1A-211ENST00000635893 LMOD1P29536 600 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-211ENST00000635893 INPP5BP32019 993 aa7.33□□□□□ -1.24
SCN1A-211ENST00000635893 MBTPS1Q14703 1052 aa7.33□□□□□ -1.24
SCN1A-211ENST00000635893 LENG1Q96BZ8 264 aaPredicted RBP7.33□□□□□ -1.24
SCN1A-211ENST00000635893 C11orf16Q9NQ32 467 aa7.33□□□□□ -1.24
SCN1A-211ENST00000635893 KLK14Q9P0G3 267 aa7.33□□□□□ -1.24
SCN1A-211ENST00000635893 GRNP28799 593 aaKnown RBP7.32□□□□□ -1.24
SCN1A-211ENST00000635893 IDH3AP50213 366 aa7.32□□□□□ -1.24
SCN1A-211ENST00000635893 ILDR2Q71H61 639 aa7.32□□□□□ -1.24
SCN1A-211ENST00000635893 TXNRD3Q86VQ6 643 aa7.32□□□□□ -1.24
SCN1A-211ENST00000635893 FOXO3O43524 673 aa7.31□□□□□ -1.24
SCN1A-211ENST00000635893 WEE1P30291 646 aa7.31□□□□□ -1.24
SCN1A-211ENST00000635893 DGKZQ13574 1117 aa7.31□□□□□ -1.24
SCN1A-211ENST00000635893 FAM35AQ86V20 835 aa7.31□□□□□ -1.24
SCN1A-211ENST00000635893 DMRTC2Q8IXT2 367 aaPredicted RBP7.31□□□□□ -1.24
SCN1A-211ENST00000635893 FMR1NBQ8N0W7 255 aaPredicted RBP7.31□□□□□ -1.24
SCN1A-211ENST00000635893 VTI1AQ96AJ9 217 aa7.31□□□□□ -1.24
SCN1A-211ENST00000635893 ARXQ96QS3 562 aa7.31□□□□□ -1.24
SCN1A-211ENST00000635893 H2AFB1P0C5Y9 115 aa7.3□□□□□ -1.24
SCN1A-211ENST00000635893 H2AFB2P0C5Z0 115 aa7.3□□□□□ -1.24
SCN1A-211ENST00000635893 ARSDP51689 593 aa7.3□□□□□ -1.24
SCN1A-211ENST00000635893 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
SCN1A-211ENST00000635893 MYO19Q96H55 970 aa7.3□□□□□ -1.24
SCN1A-211ENST00000635893 QTRT2Q9H974 415 aaKnown RBP7.3□□□□□ -1.24
SCN1A-211ENST00000635893 FRRS1LQ9P0K9 344 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms