RNA–Protein interactions for RNA: ENST00000635252.1

PRDM9-203, Transcript of PR/SET domain 9, humanhuman

TSL 5

Gene PRDM9, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-203ENST00000635252 FRAT1Q92837 279 aaPredicted RBP17.14■□□□□ 0.33
PRDM9-203ENST00000635252 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.33
PRDM9-203ENST00000635252 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
PRDM9-203ENST00000635252 KIF13BQ9NQT8 1826 aa17.14■□□□□ 0.33
PRDM9-203ENST00000635252 PTPRCP08575 1304 aa17.14■□□□□ 0.33
PRDM9-203ENST00000635252 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
PRDM9-203ENST00000635252 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
PRDM9-203ENST00000635252 NEXNQ0ZGT2 675 aa17.13■□□□□ 0.33
PRDM9-203ENST00000635252 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
PRDM9-203ENST00000635252 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
PRDM9-203ENST00000635252 A0A0G2JLW4 131 aa17.12■□□□□ 0.33
PRDM9-203ENST00000635252 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
PRDM9-203ENST00000635252 FAM89AQ96GI7 184 aa17.12■□□□□ 0.33
PRDM9-203ENST00000635252 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
PRDM9-203ENST00000635252 CWC25Q9NXE8 425 aaPredicted RBP17.12■□□□□ 0.33
PRDM9-203ENST00000635252 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
PRDM9-203ENST00000635252 KIAA1551Q9HCM1 1747 aa17.12■□□□□ 0.33
PRDM9-203ENST00000635252 N4BP2Q86UW6 1770 aaPredicted RBP17.12■□□□□ 0.33
PRDM9-203ENST00000635252 HCLS1P14317 486 aaPredicted RBP17.11■□□□□ 0.33
PRDM9-203ENST00000635252 CHRNA5P30532 468 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 ST5P78524 1137 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 CCDC191Q8NCU4 936 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 KIF16BQ96L93 1317 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
PRDM9-203ENST00000635252 TNRC6CQ9HCJ0 1690 aaKnown RBP17.11■□□□□ 0.33
PRDM9-203ENST00000635252 PXDNLA1KZ92 1463 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 DPEP1P16444 411 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
PRDM9-203ENST00000635252 TRIM27P14373 513 aa17.1■□□□□ 0.33
PRDM9-203ENST00000635252 GCKRQ14397 625 aa17.1■□□□□ 0.33
PRDM9-203ENST00000635252 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
PRDM9-203ENST00000635252 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
PRDM9-203ENST00000635252 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
PRDM9-203ENST00000635252 SRCIN1Q9C0H9 1055 aa17.09■□□□□ 0.33
PRDM9-203ENST00000635252 COL11A2P13942 1736 aaPredicted RBP17.09■□□□□ 0.33
PRDM9-203ENST00000635252 KCNA3P22001 575 aa17.08■□□□□ 0.32
PRDM9-203ENST00000635252 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.32
PRDM9-203ENST00000635252 ZBTB38Q8NAP3 1195 aaPredicted RBP17.08■□□□□ 0.32
PRDM9-203ENST00000635252 ARHGAP45Q92619 1136 aa17.08■□□□□ 0.32
PRDM9-203ENST00000635252 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
PRDM9-203ENST00000635252 PLIN1O60240 522 aa17.07■□□□□ 0.32
PRDM9-203ENST00000635252 PCCAP05165 728 aaPredicted RBP17.07■□□□□ 0.32
PRDM9-203ENST00000635252 TGFB2P61812 414 aa17.07■□□□□ 0.32
PRDM9-203ENST00000635252 SLC10A5Q5PT55 438 aa17.07■□□□□ 0.32
PRDM9-203ENST00000635252 ZKSCAN2Q63HK3 967 aa17.07■□□□□ 0.32
PRDM9-203ENST00000635252 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
PRDM9-203ENST00000635252 UBE3BQ7Z3V4 1068 aa17.07■□□□□ 0.32
PRDM9-203ENST00000635252 DDX60Q8IY21 1712 aaKnown RBP17.07■□□□□ 0.32
PRDM9-203ENST00000635252 UTRNP46939 3433 aa17.07■□□□□ 0.32
PRDM9-203ENST00000635252 IRS4O14654 1257 aaPredicted RBP17.06■□□□□ 0.32
PRDM9-203ENST00000635252 PDE6BP35913 854 aa17.06■□□□□ 0.32
PRDM9-203ENST00000635252 KLRG2A4D1S0 409 aaPredicted RBP17.06■□□□□ 0.32
PRDM9-203ENST00000635252 H0YIN7 160 aa17.06■□□□□ 0.32
PRDM9-203ENST00000635252 H7C1W4 665 aa17.06■□□□□ 0.32
PRDM9-203ENST00000635252 ABCC4O15439 1325 aa17.06■□□□□ 0.32
PRDM9-203ENST00000635252 ALDH1L1O75891 902 aa17.06■□□□□ 0.32
PRDM9-203ENST00000635252 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
PRDM9-203ENST00000635252 LAMB2P55268 1798 aa17.05■□□□□ 0.32
PRDM9-203ENST00000635252 SRGNP10124 158 aa17.05■□□□□ 0.32
PRDM9-203ENST00000635252 RLBP1P12271 317 aa17.05■□□□□ 0.32
PRDM9-203ENST00000635252 CASP7P55210 303 aa17.05■□□□□ 0.32
PRDM9-203ENST00000635252 RIC1Q4ADV7 1423 aa17.04■□□□□ 0.32
PRDM9-203ENST00000635252 ZNF622Q969S3 477 aaKnown RBP eCLIP17.04■□□□□ 0.32
PRDM9-203ENST00000635252 GRM8O00222 908 aa17.03■□□□□ 0.32
PRDM9-203ENST00000635252 NBPF7P0C2Y1 421 aaPredicted RBP17.03■□□□□ 0.32
PRDM9-203ENST00000635252 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
PRDM9-203ENST00000635252 CRY2Q49AN0 593 aa17.03■□□□□ 0.32
PRDM9-203ENST00000635252 PELP1Q8IZL8 1130 aaKnown RBP17.03■□□□□ 0.32
PRDM9-203ENST00000635252 TMEM57Q8N5G2 664 aa17.03■□□□□ 0.32
PRDM9-203ENST00000635252 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
PRDM9-203ENST00000635252 NLRP3Q96P20 1036 aa17.03■□□□□ 0.32
PRDM9-203ENST00000635252 C9orf78Q9NZ63 289 aaPredicted RBP17.03■□□□□ 0.32
PRDM9-203ENST00000635252 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
PRDM9-203ENST00000635252 DLEC1Q9Y238 1755 aa17.03■□□□□ 0.32
PRDM9-203ENST00000635252 CDHR2Q9BYE9 1310 aa17.02■□□□□ 0.32
PRDM9-203ENST00000635252 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
PRDM9-203ENST00000635252 CCDC85AQ96PX6 553 aaPredicted RBP17.02■□□□□ 0.32
PRDM9-203ENST00000635252 USP44Q9H0E7 712 aa17.02■□□□□ 0.32
PRDM9-203ENST00000635252 TAF1P21675 1872 aa17.02■□□□□ 0.31
PRDM9-203ENST00000635252 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
PRDM9-203ENST00000635252 EPHA10Q5JZY3 1008 aa17.01■□□□□ 0.31
PRDM9-203ENST00000635252 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
PRDM9-203ENST00000635252 PIM2Q9P1W9 311 aa17.01■□□□□ 0.31
PRDM9-203ENST00000635252 NPR1P16066 1061 aa17.01■□□□□ 0.31
PRDM9-203ENST00000635252 C20orf194Q5TEA3 1177 aa17.01■□□□□ 0.31
PRDM9-203ENST00000635252 SLC51AQ86UW1 340 aa17.01■□□□□ 0.31
PRDM9-203ENST00000635252 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
PRDM9-203ENST00000635252 MASTLQ96GX5 879 aa17.01■□□□□ 0.31
PRDM9-203ENST00000635252 CACNA1SQ13698 1873 aa17■□□□□ 0.31
PRDM9-203ENST00000635252 COL4A1P02462 1669 aa17■□□□□ 0.31
PRDM9-203ENST00000635252 SLX4Q8IY92 1834 aa17■□□□□ 0.31
PRDM9-203ENST00000635252 PDE8AO60658 829 aa17■□□□□ 0.31
PRDM9-203ENST00000635252 STYK1Q6J9G0 422 aa17■□□□□ 0.31
PRDM9-203ENST00000635252 RPGRQ92834 1020 aaKnown RBP17■□□□□ 0.31
PRDM9-203ENST00000635252 KAZALD1Q96I82 304 aa17■□□□□ 0.31
PRDM9-203ENST00000635252 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
PRDM9-203ENST00000635252 BCS1LQ9Y276 419 aa17■□□□□ 0.31
PRDM9-203ENST00000635252 UTYO14607 1347 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms