RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 CHRNA5P30532 468 aa18.85■□□□□ 0.61
CDC42BPB-209ENST00000634889 FKBP5Q13451 457 aaPredicted RBP18.85■□□□□ 0.61
CDC42BPB-209ENST00000634889 C2CD5Q86YS7 1000 aa18.85■□□□□ 0.61
CDC42BPB-209ENST00000634889 CCDC24Q8N4L8 307 aa18.85■□□□□ 0.61
CDC42BPB-209ENST00000634889 PIM2Q9P1W9 311 aa18.85■□□□□ 0.61
CDC42BPB-209ENST00000634889 TNRC6CQ9HCJ0 1690 aaKnown RBP18.85■□□□□ 0.61
CDC42BPB-209ENST00000634889 ARFGEF1Q9Y6D6 1849 aa18.84■□□□□ 0.61
CDC42BPB-209ENST00000634889 KLRG2A4D1S0 409 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-209ENST00000634889 YBX3P16989 372 aaKnown RBP eCLIP18.84■□□□□ 0.61
CDC42BPB-209ENST00000634889 ALDH1L2Q3SY69 923 aa18.84■□□□□ 0.61
CDC42BPB-209ENST00000634889 ERFEQ4G0M1 354 aa18.84■□□□□ 0.61
CDC42BPB-209ENST00000634889 NUTM1Q86Y26 1132 aa18.84■□□□□ 0.61
CDC42BPB-209ENST00000634889 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
CDC42BPB-209ENST00000634889 ATP5J2-PTCD1G3V325 749 aa18.83■□□□□ 0.6
CDC42BPB-209ENST00000634889 GRIN3BO60391 1043 aa18.83■□□□□ 0.6
CDC42BPB-209ENST00000634889 SRGNP10124 158 aa18.83■□□□□ 0.6
CDC42BPB-209ENST00000634889 NEXNQ0ZGT2 675 aa18.83■□□□□ 0.6
CDC42BPB-209ENST00000634889 CCDC191Q8NCU4 936 aa18.83■□□□□ 0.6
CDC42BPB-209ENST00000634889 MYD88Q99836 296 aa18.83■□□□□ 0.6
CDC42BPB-209ENST00000634889 TRMT112Q9UI30 125 aaKnown RBP18.83■□□□□ 0.6
CDC42BPB-209ENST00000634889 SH3TC1Q8TE82 1336 aa18.82■□□□□ 0.6
CDC42BPB-209ENST00000634889 LAMB2P55268 1798 aa18.82■□□□□ 0.6
CDC42BPB-209ENST00000634889 CRY2Q49AN0 593 aa18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 DALRD3Q5D0E6 543 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 STYK1Q6J9G0 422 aa18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 MRPL50Q8N5N7 158 aaKnown RBP18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 DNAAF4Q8WXU2 420 aa18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 SSH1Q8WYL5 1049 aa18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 MASTLQ96GX5 879 aa18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 BCS1LQ9Y276 419 aa18.81■□□□□ 0.6
CDC42BPB-209ENST00000634889 PTPRCP08575 1304 aa18.8■□□□□ 0.6
CDC42BPB-209ENST00000634889 NPR1P16066 1061 aa18.8■□□□□ 0.6
CDC42BPB-209ENST00000634889 TTLL6Q8N841 843 aa18.8■□□□□ 0.6
CDC42BPB-209ENST00000634889 CWC25Q9NXE8 425 aaPredicted RBP18.8■□□□□ 0.6
CDC42BPB-209ENST00000634889 WWC3Q9ULE0 1092 aa18.8■□□□□ 0.6
CDC42BPB-209ENST00000634889 DDX60Q8IY21 1712 aaKnown RBP18.8■□□□□ 0.6
CDC42BPB-209ENST00000634889 ZBTB38Q8NAP3 1195 aaPredicted RBP18.79■□□□□ 0.6
CDC42BPB-209ENST00000634889 CNKSR1Q969H4 720 aa18.79■□□□□ 0.6
CDC42BPB-209ENST00000634889 SMC4Q9NTJ3 1288 aa18.79■□□□□ 0.6
CDC42BPB-209ENST00000634889 IGKV5-2P06315 115 aa18.78■□□□□ 0.6
CDC42BPB-209ENST00000634889 HSP90B1P14625 803 aaKnown RBP18.78■□□□□ 0.6
CDC42BPB-209ENST00000634889 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
CDC42BPB-209ENST00000634889 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
CDC42BPB-209ENST00000634889 ZNF622Q969S3 477 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDC42BPB-209ENST00000634889 NLRP3Q96P20 1036 aa18.78■□□□□ 0.6
CDC42BPB-209ENST00000634889 UTRNP46939 3433 aa18.78■□□□□ 0.6
CDC42BPB-209ENST00000634889 NEURL1BA8MQ27 555 aa18.77■□□□□ 0.6
CDC42BPB-209ENST00000634889 PCCAP05165 728 aaPredicted RBP18.77■□□□□ 0.6
CDC42BPB-209ENST00000634889 FAM89AQ96GI7 184 aa18.77■□□□□ 0.6
CDC42BPB-209ENST00000634889 BCL2L13Q9BXK5 485 aa18.77■□□□□ 0.6
CDC42BPB-209ENST00000634889 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
CDC42BPB-209ENST00000634889 RARSP54136 660 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-209ENST00000634889 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-209ENST00000634889 RPGRQ92834 1020 aaKnown RBP18.76■□□□□ 0.59
CDC42BPB-209ENST00000634889 CHD4Q14839 1912 aa18.76■□□□□ 0.59
CDC42BPB-209ENST00000634889 F6X3S4 739 aa18.75■□□□□ 0.59
CDC42BPB-209ENST00000634889 HCLS1P14317 486 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-209ENST00000634889 ALDH1B1P30837 517 aa18.75■□□□□ 0.59
CDC42BPB-209ENST00000634889 HOXA10P31260 410 aaPredicted RBP18.75■□□□□ 0.59
CDC42BPB-209ENST00000634889 SYNE4Q8N205 404 aa18.75■□□□□ 0.59
CDC42BPB-209ENST00000634889 CDHR2Q9BYE9 1310 aa18.74■□□□□ 0.59
CDC42BPB-209ENST00000634889 IRS4O14654 1257 aaPredicted RBP18.74■□□□□ 0.59
CDC42BPB-209ENST00000634889 GCKRQ14397 625 aa18.74■□□□□ 0.59
CDC42BPB-209ENST00000634889 BEND3Q5T5X7 828 aa18.74■□□□□ 0.59
CDC42BPB-209ENST00000634889 PRPF40BQ6NWY9 871 aaKnown RBP18.74■□□□□ 0.59
CDC42BPB-209ENST00000634889 SLX4Q8IY92 1834 aa18.74■□□□□ 0.59
CDC42BPB-209ENST00000634889 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
CDC42BPB-209ENST00000634889 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
CDC42BPB-209ENST00000634889 C3orf67Q6ZVT6 689 aa18.73■□□□□ 0.59
CDC42BPB-209ENST00000634889 RBM17Q96I25 401 aaKnown RBP18.73■□□□□ 0.59
CDC42BPB-209ENST00000634889 CRAMP1Q96RY5 1269 aa18.73■□□□□ 0.59
CDC42BPB-209ENST00000634889 ALDH1L1O75891 902 aa18.72■□□□□ 0.59
CDC42BPB-209ENST00000634889 SOGA3Q5TF21 947 aa18.72■□□□□ 0.59
CDC42BPB-209ENST00000634889 H7C1W4 665 aa18.71■□□□□ 0.59
CDC42BPB-209ENST00000634889 PDE8AO60658 829 aa18.71■□□□□ 0.59
CDC42BPB-209ENST00000634889 SF3B3Q15393 1217 aaKnown RBP18.71■□□□□ 0.59
CDC42BPB-209ENST00000634889 SLC4A10Q6U841 1118 aa18.71■□□□□ 0.59
CDC42BPB-209ENST00000634889 SRCIN1Q9C0H9 1055 aa18.71■□□□□ 0.59
CDC42BPB-209ENST00000634889 MYH3P11055 1940 aa18.7■□□□□ 0.58
CDC42BPB-209ENST00000634889 ARHGAP27Q6ZUM4 889 aa18.7■□□□□ 0.58
CDC42BPB-209ENST00000634889 ARHGAP45Q92619 1136 aa18.7■□□□□ 0.58
CDC42BPB-209ENST00000634889 NOB1Q9ULX3 412 aaKnown RBP18.7■□□□□ 0.58
CDC42BPB-209ENST00000634889 C21orf2O43822 256 aa18.69■□□□□ 0.58
CDC42BPB-209ENST00000634889 DDX46Q7L014 1031 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-209ENST00000634889 UBE3BQ7Z3V4 1068 aa18.69■□□□□ 0.58
CDC42BPB-209ENST00000634889 C7orf43Q8WVR3 580 aa18.69■□□□□ 0.58
CDC42BPB-209ENST00000634889 API5Q9BZZ5 524 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-209ENST00000634889 FER1L6Q2WGJ9 1857 aa18.69■□□□□ 0.58
CDC42BPB-209ENST00000634889 CASP7P55210 303 aa18.68■□□□□ 0.58
CDC42BPB-209ENST00000634889 ABCC4O15439 1325 aa18.68■□□□□ 0.58
CDC42BPB-209ENST00000634889 GRM8O00222 908 aa18.67■□□□□ 0.58
CDC42BPB-209ENST00000634889 IPO8O15397 1037 aaKnown RBP18.67■□□□□ 0.58
CDC42BPB-209ENST00000634889 CCDC152Q4G0S7 254 aa18.67■□□□□ 0.58
CDC42BPB-209ENST00000634889 CCDC93Q567U6 631 aa18.67■□□□□ 0.58
CDC42BPB-209ENST00000634889 JARID2Q92833 1246 aaPredicted RBP18.67■□□□□ 0.58
CDC42BPB-209ENST00000634889 PLA2G12BQ9BX93 195 aa18.67■□□□□ 0.58
CDC42BPB-209ENST00000634889 PPEF1O14829 653 aaPredicted RBP18.66■□□□□ 0.58
CDC42BPB-209ENST00000634889 BCAR3O75815 825 aa18.66■□□□□ 0.58
CDC42BPB-209ENST00000634889 BBOX1O75936 387 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms