RNA–Protein interactions for RNA: ENST00000631832.1

LINC01002-208, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 622 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-208	ENST00000631832	ABCC12	Q96J65	1359 aa		13.67	□□□□□ -0.22
LINC01002-208	ENST00000631832	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	NTSR2	O95665	410 aa		13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	PDE6B	P35913	854 aa		13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	PARP10	Q53GL7	1025 aa		13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	KSR2	Q6VAB6	950 aa		13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	PIM2	Q9P1W9	311 aa		13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	TRMT112	Q9UI30	125 aa	Known RBP	13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	ADCY9	O60503	1353 aa		13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	GOLGB1	Q14789	3259 aa	Known RBP	13.66	□□□□□ -0.22
LINC01002-208	ENST00000631832	BRCA1	P38398	1863 aa	Known RBP	13.65	□□□□□ -0.22
LINC01002-208	ENST00000631832	CACNA1F	O60840	1977 aa		13.65	□□□□□ -0.22
LINC01002-208	ENST00000631832		F6X3S4	739 aa		13.65	□□□□□ -0.22
LINC01002-208	ENST00000631832	YTHDC1	Q96MU7	727 aa	Known RBP	13.65	□□□□□ -0.22
LINC01002-208	ENST00000631832	DLEC1	Q9Y238	1755 aa		13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	HCLS1	P14317	486 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	CWF19L2	Q2TBE0	894 aa	Known RBP	13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	DALRD3	Q5D0E6	543 aa	Known RBP	13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	C3orf67	Q6ZVT6	689 aa		13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	SSH1	Q8WYL5	1049 aa		13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	FAM89A	Q96GI7	184 aa		13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	ISCA1	Q9BUE6	129 aa		13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	METTL22	Q9BUU2	404 aa	Predicted RBP	13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	ZBED9	Q6R2W3	1325 aa		13.64	□□□□□ -0.23
LINC01002-208	ENST00000631832	MRPL50	Q8N5N7	158 aa	Known RBP	13.63	□□□□□ -0.23
LINC01002-208	ENST00000631832	SMC4	Q9NTJ3	1288 aa		13.63	□□□□□ -0.23
LINC01002-208	ENST00000631832	NEXN	Q0ZGT2	675 aa		13.62	□□□□□ -0.23
LINC01002-208	ENST00000631832	SLC4A10	Q6U841	1118 aa		13.62	□□□□□ -0.23
LINC01002-208	ENST00000631832	DNAAF4	Q8WXU2	420 aa		13.62	□□□□□ -0.23
LINC01002-208	ENST00000631832	SH3TC1	Q8TE82	1336 aa		13.62	□□□□□ -0.23
LINC01002-208	ENST00000631832	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	LAMB2	P55268	1798 aa		13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	IGKV5-2	P06315	115 aa		13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	SRGN	P10124	158 aa		13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	ARHGAP27	Q6ZUM4	889 aa		13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	TTLL6	Q8N841	843 aa		13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	MASTL	Q96GX5	879 aa		13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	CWC25	Q9NXE8	425 aa	Predicted RBP	13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	UTRN	P46939	3433 aa		13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	DDX60	Q8IY21	1712 aa	Known RBP	13.61	□□□□□ -0.23
LINC01002-208	ENST00000631832	SLX4	Q8IY92	1834 aa		13.6	□□□□□ -0.23
LINC01002-208	ENST00000631832	GRIN3B	O60391	1043 aa		13.6	□□□□□ -0.23
LINC01002-208	ENST00000631832	RPGR	Q92834	1020 aa	Known RBP	13.6	□□□□□ -0.23
LINC01002-208	ENST00000631832	NLRP3	Q96P20	1036 aa		13.6	□□□□□ -0.23
LINC01002-208	ENST00000631832	ARFGEF1	Q9Y6D6	1849 aa		13.6	□□□□□ -0.23
LINC01002-208	ENST00000631832	NEURL1B	A8MQ27	555 aa		13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	IRS4	O14654	1257 aa	Predicted RBP	13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	C21orf2	O43822	256 aa		13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	NPR1	P16066	1061 aa		13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	TRIM28	Q13263	835 aa	Known RBP	13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	PRPF40B	Q6NWY9	871 aa	Known RBP	13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	CCDC191	Q8NCU4	936 aa		13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	TAF1	P21675	1872 aa		13.59	□□□□□ -0.23
LINC01002-208	ENST00000631832	RARS	P54136	660 aa	Known RBP	13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	ALDH1L2	Q3SY69	923 aa		13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	SLC10A5	Q5PT55	438 aa		13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	STYK1	Q6J9G0	422 aa		13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	OLFM4	Q6UX06	510 aa		13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	SLC51A	Q86UW1	340 aa		13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	CNKSR1	Q969H4	720 aa		13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	NOB1	Q9ULX3	412 aa	Known RBP	13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	PDZRN3	Q9UPQ7	1066 aa		13.58	□□□□□ -0.24
LINC01002-208	ENST00000631832	KLRG2	A4D1S0	409 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC01002-208	ENST00000631832	BCAR3	O75815	825 aa		13.57	□□□□□ -0.24
LINC01002-208	ENST00000631832	PCCA	P05165	728 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC01002-208	ENST00000631832	CT47B1	P0C2W7	299 aa	Predicted RBP	13.57	□□□□□ -0.24
LINC01002-208	ENST00000631832	UBE3B	Q7Z3V4	1068 aa		13.57	□□□□□ -0.24
LINC01002-208	ENST00000631832	RBM17	Q96I25	401 aa	Known RBP	13.57	□□□□□ -0.24
LINC01002-208	ENST00000631832	CHD4	Q14839	1912 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	RASSF7	Q02833	373 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	GCKR	Q14397	625 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	CRY2	Q49AN0	593 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	BEND3	Q5T5X7	828 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	LINS1	Q8NG48	757 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	FRAT1	Q92837	279 aa	Predicted RBP	13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	RNF123	Q5XPI4	1314 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	RIC1	Q4ADV7	1423 aa		13.56	□□□□□ -0.24
LINC01002-208	ENST00000631832	YY1	P25490	414 aa		13.55	□□□□□ -0.24
LINC01002-208	ENST00000631832	ALDH1B1	P30837	517 aa		13.55	□□□□□ -0.24
LINC01002-208	ENST00000631832	SRCIN1	Q9C0H9	1055 aa		13.55	□□□□□ -0.24
LINC01002-208	ENST00000631832	PTPRC	P08575	1304 aa		13.55	□□□□□ -0.24
LINC01002-208	ENST00000631832	DDX46	Q7L014	1031 aa	Known RBP	13.54	□□□□□ -0.24
LINC01002-208	ENST00000631832	TNN	Q9UQP3	1299 aa		13.54	□□□□□ -0.24
LINC01002-208	ENST00000631832	ABCC4	O15439	1325 aa		13.54	□□□□□ -0.24
LINC01002-208	ENST00000631832	COL4A1	P02462	1669 aa		13.53	□□□□□ -0.24
LINC01002-208	ENST00000631832	CCDC88A	Q3V6T2	1871 aa		13.53	□□□□□ -0.24
LINC01002-208	ENST00000631832		H7C1W4	665 aa		13.53	□□□□□ -0.24
LINC01002-208	ENST00000631832	PPEF1	O14829	653 aa	Predicted RBP	13.53	□□□□□ -0.24
LINC01002-208	ENST00000631832	PDE8A	O60658	829 aa		13.53	□□□□□ -0.24
LINC01002-208	ENST00000631832	SEC31B	Q9NQW1	1179 aa		13.53	□□□□□ -0.24
LINC01002-208	ENST00000631832	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.53	□□□□□ -0.24
LINC01002-208	ENST00000631832	HOXA10	P31260	410 aa	Predicted RBP	13.52	□□□□□ -0.25
LINC01002-208	ENST00000631832	CLUAP1	Q96AJ1	413 aa		13.52	□□□□□ -0.25
LINC01002-208	ENST00000631832	CRAMP1	Q96RY5	1269 aa		13.52	□□□□□ -0.25
LINC01002-208	ENST00000631832	CDHR2	Q9BYE9	1310 aa		13.52	□□□□□ -0.25
LINC01002-208	ENST00000631832	MYH3	P11055	1940 aa		13.52	□□□□□ -0.25
LINC01002-208	ENST00000631832	SPEF2	Q9C093	1822 aa		13.51	□□□□□ -0.25
LINC01002-208	ENST00000631832	KIF16B	Q96L93	1317 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms