RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 GRIN2BQ13224 1484 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 SHTN1A0MZ66 631 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CFAP57Q96MR6 1250 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 TMOD4Q9NZQ9 345 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CALM1P0DP23 149 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CALM2P0DP24 149 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CALM3P0DP25 149 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CAMK4Q16566 473 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 FILIP1Q7Z7B0 1213 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 IFNL2Q8IZJ0 200 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 PYM1Q9BRP8 204 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 PICK1Q9NRD5 415 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 ATAD2BQ9ULI0 1458 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 GUCY1B3Q02153 619 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CNNM3Q8NE01 707 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 EXOC1Q9NV70 894 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 MRVI1Q9Y6F6 885 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 BMS1Q14692 1282 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 WDR63Q8IWG1 891 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 ZSCAN12O43309 604 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 FCHSD2O94868 740 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 TMCO3Q6UWJ1 677 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 NAA15Q9BXJ9 866 aaKnown RBP7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 MAP3K11Q16584 847 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CCDC83Q8IWF9 413 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 EYA3Q99504 573 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CCDC8Q9H0W5 538 aaPredicted RBP7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 CCDC61Q9Y6R9 512 aa7.37□□□□□ -1.23
SRGAP1-207ENST00000631006 FANCIQ9NVI1 1328 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 GAS8O95995 478 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 C6orf163Q5TEZ5 329 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 PROCA1Q8NCQ7 364 aaPredicted RBP7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 TIGD1Q96MW7 591 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 HAUS7Q99871 368 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 MSANTD4Q8NCY6 345 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 STX8Q9UNK0 236 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 FAM13AO94988 1023 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 NLRP3Q96P20 1036 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 AMOTL2Q9Y2J4 779 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 TOP1P11387 765 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 TCIRG1Q13488 830 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 IFI16Q16666 785 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 SPECC1Q5M775 1068 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 CADPS2Q86UW7 1296 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 IQCGQ9H095 443 aaKnown RBP7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 UQCRFS1P1P0C7P4 283 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 CCDC14Q49A88 953 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 C6orf50Q9HD87 102 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 TSHZ2Q9NRE2 1034 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 RIMBP2O15034 1052 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 HLTFQ14527 1009 aaKnown RBP eCLIP7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 PLVAPQ9BX97 442 aa7.36□□□□□ -1.23
SRGAP1-207ENST00000631006 UBA7P41226 1012 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 KIF22Q14807 665 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 RPAP2Q8IXW5 612 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 EXOC6BQ9Y2D4 811 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 FGD6Q6ZV73 1430 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 A0A1W2PRG0 241 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 MX1P20591 662 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 ANO10Q9NW15 660 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 RTCBQ9Y3I0 505 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 IVNS1ABPQ9Y6Y0 642 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 PSMC4P43686 418 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 HEATR3Q7Z4Q2 680 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 BBXQ8WY36 941 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 KIF21BO75037 1637 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 GJC1P36383 396 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 EIF6P56537 245 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 WAPLQ7Z5K2 1190 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 RBM17Q96I25 401 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 ZC3H12CQ9C0D7 883 aaKnown RBP7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 ZBTB21Q9ULJ3 1066 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 HFM1A2PYH4 1435 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 SPDYE3A6NKU9 549 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 GOLIM4O00461 696 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 KIF4BQ2VIQ3 1234 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 CEP135Q66GS9 1140 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 CCDC63Q8NA47 563 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 CPLX3Q8WVH0 158 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 C9orf84Q5VXU9 1444 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 DDB1Q16531 1140 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 MPNDQ8N594 471 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 DNAAF4Q8WXU2 420 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 RNF34Q969K3 372 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 MAP3K2Q9Y2U5 619 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 NACA2Q9H009 215 aa7.35□□□□□ -1.23
SRGAP1-207ENST00000631006 EEF2P13639 858 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 PDE3AQ14432 1141 aa7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 EAPPQ56P03 285 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 IFIT1BQ5T764 474 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 RIOK3O14730 519 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 BACH1O14867 736 aa7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 CYP7A1P22680 504 aa7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 CCT2P78371 535 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 SP4Q02446 784 aa7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 GPR162Q16538 588 aa7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 GOLGA1Q92805 767 aa7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 IARSP41252 1262 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-207ENST00000631006 METAP2P50579 478 aaKnown RBP eCLIP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms