RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 C2orf69Q8N8R5 385 aa8.67□□□□□ -1.02
LINC00649-220ENST00000628906 CFHR5Q9BXR6 569 aa8.67□□□□□ -1.02
LINC00649-220ENST00000628906 COL11A2P13942 1736 aaPredicted RBP8.66□□□□□ -1.02
LINC00649-220ENST00000628906 PSMD1Q99460 953 aa8.66□□□□□ -1.02
LINC00649-220ENST00000628906 MTMR10Q9NXD2 777 aa8.66□□□□□ -1.02
LINC00649-220ENST00000628906 LAMA2P24043 3122 aaKnown RBP8.66□□□□□ -1.02
LINC00649-220ENST00000628906 PRUNE2Q8WUY3 3088 aa8.65□□□□□ -1.02
LINC00649-220ENST00000628906 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.02
LINC00649-220ENST00000628906 OLFM4Q6UX06 510 aa8.65□□□□□ -1.02
LINC00649-220ENST00000628906 HDGFL2Q7Z4V5 671 aaPredicted RBP8.65□□□□□ -1.02
LINC00649-220ENST00000628906 USP48Q86UV5 1035 aa8.65□□□□□ -1.02
LINC00649-220ENST00000628906 COG3Q96JB2 828 aa8.65□□□□□ -1.02
LINC00649-220ENST00000628906 TMEM106CQ9BVX2 250 aa8.65□□□□□ -1.02
LINC00649-220ENST00000628906 ARFGEF2Q9Y6D5 1785 aa8.65□□□□□ -1.02
LINC00649-220ENST00000628906 TONSLQ96HA7 1378 aa8.64□□□□□ -1.03
LINC00649-220ENST00000628906 BCORQ6W2J9 1755 aa8.64□□□□□ -1.03
LINC00649-220ENST00000628906 SYNGAP1Q96PV0 1343 aa8.64□□□□□ -1.03
LINC00649-220ENST00000628906 TM4SF4P48230 202 aa8.64□□□□□ -1.03
LINC00649-220ENST00000628906 RRS1Q15050 365 aaKnown RBP8.64□□□□□ -1.03
LINC00649-220ENST00000628906 DLK2Q6UY11 383 aa8.64□□□□□ -1.03
LINC00649-220ENST00000628906 OTOP1Q7RTM1 612 aa8.64□□□□□ -1.03
LINC00649-220ENST00000628906 NCAPD2Q15021 1401 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 A0A1W2PP64 1363 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 KLRG2A4D1S0 409 aaPredicted RBP8.63□□□□□ -1.03
LINC00649-220ENST00000628906 TBC1D9BQ66K14 1250 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 Q7L0L9 218 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 SLC12A5Q9H2X9 1139 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 PTPN22Q9Y2R2 807 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 TRIM17Q9Y577 477 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 EYSQ5T1H1 3165 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 SNED1Q8TER0 1413 aa8.63□□□□□ -1.03
LINC00649-220ENST00000628906 COL4A5P29400 1685 aa8.62□□□□□ -1.03
LINC00649-220ENST00000628906 COL15A1P39059 1388 aa8.62□□□□□ -1.03
LINC00649-220ENST00000628906 CYP19A1P11511 503 aaPredicted RBP8.62□□□□□ -1.03
LINC00649-220ENST00000628906 NPR1P16066 1061 aa8.62□□□□□ -1.03
LINC00649-220ENST00000628906 RASAL3Q86YV0 1011 aa8.62□□□□□ -1.03
LINC00649-220ENST00000628906 DPF3Q92784 378 aa8.62□□□□□ -1.03
LINC00649-220ENST00000628906 R3HDMLQ9H3Y0 253 aa8.62□□□□□ -1.03
LINC00649-220ENST00000628906 ABCB7O75027 752 aa8.61□□□□□ -1.03
LINC00649-220ENST00000628906 DNAJC10Q8IXB1 793 aa8.61□□□□□ -1.03
LINC00649-220ENST00000628906 ZNF333Q96JL9 665 aa8.61□□□□□ -1.03
LINC00649-220ENST00000628906 TERF2IPQ9NYB0 399 aa8.61□□□□□ -1.03
LINC00649-220ENST00000628906 CDHR2Q9BYE9 1310 aa8.6□□□□□ -1.03
LINC00649-220ENST00000628906 HSP90AB1P08238 724 aaKnown RBP8.6□□□□□ -1.03
LINC00649-220ENST00000628906 CABP4P57796 275 aa8.6□□□□□ -1.03
LINC00649-220ENST00000628906 LARGE2Q8N3Y3 721 aa8.6□□□□□ -1.03
LINC00649-220ENST00000628906 CNBD1Q8NA66 436 aa8.6□□□□□ -1.03
LINC00649-220ENST00000628906 TRPM4Q8TD43 1214 aa8.6□□□□□ -1.03
LINC00649-220ENST00000628906 SYMPKQ92797 1274 aaKnown RBP8.6□□□□□ -1.03
LINC00649-220ENST00000628906 ARIH1Q9Y4X5 557 aaPredicted RBP8.6□□□□□ -1.03
LINC00649-220ENST00000628906 LAMB4A4D0S4 1761 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 ALDH1B1P30837 517 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 DSG3P32926 999 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 ST5P78524 1137 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 CXCL9Q07325 125 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 KRT26Q7Z3Y9 468 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 TMC1Q8TDI8 760 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 ZBTB1Q9Y2K1 713 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 NR2E3Q9Y5X4 410 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 TJP1Q07157 1748 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 KIF24Q5T7B8 1368 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 NCOR1O75376 2440 aa8.59□□□□□ -1.03
LINC00649-220ENST00000628906 WTIPA6NIX2 430 aaPredicted RBP8.58□□□□□ -1.04
LINC00649-220ENST00000628906 ZBTB7BO15156 539 aaPredicted RBP8.58□□□□□ -1.04
LINC00649-220ENST00000628906 GMPSP49915 693 aaPredicted RBP8.58□□□□□ -1.04
LINC00649-220ENST00000628906 EIF5P55010 431 aaKnown RBP8.58□□□□□ -1.04
LINC00649-220ENST00000628906 MAP3K12Q12852 859 aa8.58□□□□□ -1.04
LINC00649-220ENST00000628906 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
LINC00649-220ENST00000628906 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
LINC00649-220ENST00000628906 BDP1A6H8Y1 2624 aa8.58□□□□□ -1.04
LINC00649-220ENST00000628906 NPC1L1Q9UHC9 1359 aa8.58□□□□□ -1.04
LINC00649-220ENST00000628906 LRIT3Q3SXY7 679 aa8.57□□□□□ -1.04
LINC00649-220ENST00000628906 GRIPAP1Q4V328 841 aa8.57□□□□□ -1.04
LINC00649-220ENST00000628906 FLT4P35916 1363 aa8.57□□□□□ -1.04
LINC00649-220ENST00000628906 POLR2AP24928 1970 aaKnown RBP8.57□□□□□ -1.04
LINC00649-220ENST00000628906 RPTORQ8N122 1335 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 A0A087WZG4 1122 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 TNFRSF10AO00220 468 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 BMP8BP34820 402 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 FKBP1BP68106 108 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 SLC4A8Q2Y0W8 1093 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 NBPF11Q86T75 865 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 NIM1KQ8IY84 436 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 EYA1Q99502 592 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 VPS33BQ9H267 617 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 CNOT7Q9UIV1 285 aaKnown RBP8.56□□□□□ -1.04
LINC00649-220ENST00000628906 MRC1P22897 1456 aa8.56□□□□□ -1.04
LINC00649-220ENST00000628906 NPHP1O15259 732 aa8.55□□□□□ -1.04
LINC00649-220ENST00000628906 POLA2Q14181 598 aa8.55□□□□□ -1.04
LINC00649-220ENST00000628906 UBE2Q1Q7Z7E8 422 aa8.55□□□□□ -1.04
LINC00649-220ENST00000628906 HTATIP2Q9BUP3 242 aa8.55□□□□□ -1.04
LINC00649-220ENST00000628906 STAP2Q9UGK3 403 aa8.55□□□□□ -1.04
LINC00649-220ENST00000628906 ZNRF3Q9ULT6 936 aa8.55□□□□□ -1.04
LINC00649-220ENST00000628906 ADM5C9JUS6 153 aa8.54□□□□□ -1.04
LINC00649-220ENST00000628906 H7C1D1 291 aa8.54□□□□□ -1.04
LINC00649-220ENST00000628906 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
LINC00649-220ENST00000628906 ALDH1A1P00352 501 aa8.54□□□□□ -1.04
LINC00649-220ENST00000628906 SREBF2Q12772 1141 aa8.54□□□□□ -1.04
LINC00649-220ENST00000628906 PPARGC1BQ86YN6 1023 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms