RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 FAM177A1Q8N128 213 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 NBPF15Q8N660 670 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 PRPF38AQ8NAV1 312 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 PROCA1Q8NCQ7 364 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 CTCFLQ8NI51 663 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 ZCRB1Q8TBF4 217 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 MIPOL1Q8TD10 442 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 MICAL1Q8TDZ2 1067 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 PARD3BQ8TEW8 1205 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SNRNP27Q8WVK2 155 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 C17orf50Q8WW18 174 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 TCP11Q8WWU5 503 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 KAT2BQ92831 832 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 KCNB2Q92953 911 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 DTNBP1Q96EV8 351 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 CCDC34Q96HJ3 373 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 TMX3Q96JJ7 454 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 RMDN2Q96LZ7 410 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 PLEKHG4BQ96PX9 1271 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SLX1AQ9BQ83 275 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 FUCA2Q9BTY2 467 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 MAF1Q9H063 256 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 IQCGQ9H095 443 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 ACBD3Q9H3P7 528 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 RMI1Q9H9A7 625 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 ATP6V0A4Q9HBG4 840 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 BATF3Q9NR55 127 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 UTP6Q9NYH9 597 aaKnown RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 ORC3Q9UBD5 711 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 SUN2Q9UH99 717 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 ODF2LQ9ULJ1 636 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SYNPO2Q9UMS6 1093 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 EXOC6BQ9Y2D4 811 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 AKAP2Q9Y2D5 859 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 CC2D2AQ9P2K1 1620 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 SSH2Q76I76 1423 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 CASZ1Q86V15 1759 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 DNMBPQ6XZF7 1577 aa2.23□□□□□ -2.05
TCF4-264ENST00000628391 RPAP1Q9BWH6 1393 aaPredicted RBP2.23□□□□□ -2.05
TCF4-264ENST00000628391 CEP152O94986 1710 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 EFCAB6Q5THR3 1501 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 ASXL1Q8IXJ9 1541 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 KDM5AP29375 1690 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 TUBGCP6Q96RT7 1819 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 GRIN2BQ13224 1484 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 USP32Q8NFA0 1604 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 SENP3-EIF4A1A0A087X0R7 540 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 EFCAB8A8MWE9 144 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 POTEB2H3BUK9 544 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 LIN7AO14910 233 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 ZSCAN9O15535 394 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 SRGAP3O43295 1099 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 TPD52L2O43399 206 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 ST18O60284 1047 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 OPA1O60313 960 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 CDC45O75419 566 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 FSBPO95073 299 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 ECEL1O95672 775 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 BRD1O95696 1058 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 FESP07332 822 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 CCDC192P0DO97 292 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 CHGAP10645 457 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 MX1P20591 662 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 MCM2P49736 904 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 CLNS1AP54105 237 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 DEUP1Q05D60 604 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 G3BP1Q13283 466 aaKnown RBP eCLIP2.22□□□□□ -2.05
TCF4-264ENST00000628391 SF3B2Q13435 895 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 LAMB3Q13751 1172 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 MCM6Q14566 821 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 MVPQ14764 893 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 SLMAPQ14BN4 828 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 CCDC93Q567U6 631 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 ACBD5Q5T8D3 534 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 RBM26Q5T8P6 1007 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 HHATQ5VTY9 493 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 ISM2Q6H9L7 571 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 LRRC31Q6UY01 552 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 BRAPQ7Z569 592 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 TAX1BP1Q86VP1 789 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 SPATS2Q86XZ4 545 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 MYLK4Q86YV6 388 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 CCDC50Q8IVM0 306 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 TRIM42Q8IWZ5 723 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 OGFOD1Q8N543 542 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 MAB21L3Q8N8X9 362 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 LSM14AQ8ND56 463 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 C3orf20Q8ND61 904 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 OR8K1Q8NGG5 319 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 FAM71BQ8TC56 605 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 FAM200AQ8TCP9 573 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 MAGEC3Q8TD91 643 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 UBXN4Q92575 508 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 ZKSCAN4Q969J2 545 aaPredicted RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 XAGE2Q96GT9 111 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 RBM17Q96I25 401 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 RSRC1Q96IZ7 334 aaKnown RBP2.22□□□□□ -2.05
TCF4-264ENST00000628391 AGAP3Q96P47 875 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 OSBPL9Q96SU4 736 aa2.22□□□□□ -2.05
TCF4-264ENST00000628391 ARPC5LQ9BPX5 153 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms