RNA–Protein interactions for RNA: ENST00000627869.1

CHRNA4-210, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-210ENST00000627869 APAF1O14727 1248 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 CTCFP49711 727 aaPredicted RBP15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 LBX1P52954 281 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 CCDC27Q2M243 656 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 ERFEQ4G0M1 354 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 WBP1LQ9NX94 342 aa15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 TNRC18O15417 2968 aaPredicted RBP15.26■□□□□ 0.03
CHRNA4-210ENST00000627869 UBN2Q6ZU65 1347 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 LTBP3Q9NS15 1303 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 ANXA1P04083 346 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 ALDH1B1P30837 517 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 PROSER3Q2NL68 480 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 ZNF34Q8IZ26 560 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 ABHD8Q96I13 439 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 CFAP44Q96MT7 982 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 LAMB4A4D0S4 1761 aa15.25■□□□□ 0.03
CHRNA4-210ENST00000627869 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 CCDC93Q567U6 631 aa15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 SUSD4Q5VX71 490 aa15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 COPS6Q7L5N1 327 aa15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 PPP1R42Q7Z4L9 355 aa15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 C7orf43Q8WVR3 580 aa15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 IBTKQ9P2D0 1353 aaPredicted RBP15.24■□□□□ 0.03
CHRNA4-210ENST00000627869 ITGBL1O95965 494 aaPredicted RBP15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 HOXB7P09629 217 aa15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 HSPA8P11142 646 aaKnown RBP15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 CALD1Q05682 793 aaKnown RBP15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 AIMP1Q12904 312 aaKnown RBP15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 CRY2Q49AN0 593 aa15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 HDGFL1Q5TGJ6 251 aa15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 XAGE3Q8WTP9 111 aa15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 ADAMTSL1Q8N6G6 1762 aa15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 ABCC12Q96J65 1359 aa15.23■□□□□ 0.03
CHRNA4-210ENST00000627869 SLX4Q8IY92 1834 aa15.22■□□□□ 0.03
CHRNA4-210ENST00000627869 HSP90AB3PQ58FF7 597 aa15.22■□□□□ 0.03
CHRNA4-210ENST00000627869 RPGRQ92834 1020 aaKnown RBP15.22■□□□□ 0.03
CHRNA4-210ENST00000627869 ZBED9Q6R2W3 1325 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 CACNA1SQ13698 1873 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 NTSR2O95665 410 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 RTKN2Q8IZC4 609 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 AIDAQ96BJ3 306 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 UTP14AQ9BVJ6 771 aaKnown RBP15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 IFT57Q9NWB7 429 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 CHPF2Q9P2E5 772 aa15.21■□□□□ 0.03
CHRNA4-210ENST00000627869 SCN4AP35499 1836 aa15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 GNAI1P63096 354 aa15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 FKBP4Q02790 459 aaKnown RBP eCLIP15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 LDHDQ86WU2 507 aa15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 WWC1Q8IX03 1113 aa15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 TAF1DQ9H5J8 278 aaPredicted RBP15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
CHRNA4-210ENST00000627869 RIC1Q4ADV7 1423 aa15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 TMEM88BA6NKF7 163 aa15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 HOXA10P31260 410 aaPredicted RBP15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 TCIRG1Q13488 830 aa15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 OLFM4Q6UX06 510 aa15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 RBM17Q96I25 401 aaKnown RBP15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
CHRNA4-210ENST00000627869 RNF123Q5XPI4 1314 aa15.18■□□□□ 0.02
CHRNA4-210ENST00000627869 HNRNPUQ00839 825 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHRNA4-210ENST00000627869 CC2D2BQ6DHV5 1058 aa15.18■□□□□ 0.02
CHRNA4-210ENST00000627869 NLRP10Q86W26 655 aa15.18■□□□□ 0.02
CHRNA4-210ENST00000627869 ZNF277Q9NRM2 450 aaPredicted RBP15.18■□□□□ 0.02
CHRNA4-210ENST00000627869 HYPKQ9NX55 129 aa15.18■□□□□ 0.02
CHRNA4-210ENST00000627869 ARFGEF2Q9Y6D5 1785 aa15.18■□□□□ 0.02
CHRNA4-210ENST00000627869 RASSF10A6NK89 507 aa15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 RGS19P49795 217 aa15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 SLC10A5Q5PT55 438 aa15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 ANKRD13DQ6ZTN6 518 aa15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 TRMT2AQ8IZ69 625 aaKnown RBP15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 PLBD2Q8NHP8 589 aa15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 CRAMP1Q96RY5 1269 aa15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 PCDH10Q9P2E7 1040 aa15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 TRMT112Q9UI30 125 aaKnown RBP15.17■□□□□ 0.02
CHRNA4-210ENST00000627869 GRIPAP1Q4V328 841 aa15.16■□□□□ 0.02
CHRNA4-210ENST00000627869 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
CHRNA4-210ENST00000627869 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
CHRNA4-210ENST00000627869 PSMD1Q99460 953 aa15.16■□□□□ 0.02
CHRNA4-210ENST00000627869 THSD7BQ9C0I4 1608 aa15.16■□□□□ 0.02
CHRNA4-210ENST00000627869 IL16Q14005 1332 aa15.16■□□□□ 0.02
CHRNA4-210ENST00000627869 ZNF541Q9H0D2 1346 aa15.16■□□□□ 0.02
CHRNA4-210ENST00000627869 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
CHRNA4-210ENST00000627869 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
CHRNA4-210ENST00000627869 MLLT1Q03111 559 aaPredicted RBP15.15■□□□□ 0.02
CHRNA4-210ENST00000627869 WDR63Q8IWG1 891 aa15.15■□□□□ 0.02
CHRNA4-210ENST00000627869 CHMP4AQ9BY43 222 aa15.15■□□□□ 0.02
CHRNA4-210ENST00000627869 TMX4Q9H1E5 349 aaPredicted RBP15.15■□□□□ 0.02
CHRNA4-210ENST00000627869 SH3TC1Q8TE82 1336 aa15.15■□□□□ 0.02
CHRNA4-210ENST00000627869 IQCA1LA6NCM1 817 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms