RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 SRCIN1Q9C0H9 1055 aa23.87■■□□□ 1.41
MECP2-216ENST00000627864 CWC25Q9NXE8 425 aaPredicted RBP23.87■■□□□ 1.41
MECP2-216ENST00000627864 CCDC24Q8N4L8 307 aa23.86■■□□□ 1.41
MECP2-216ENST00000627864 CNBD1Q8NA66 436 aa23.86■■□□□ 1.41
MECP2-216ENST00000627864 NYXQ9GZU5 481 aa23.86■■□□□ 1.41
MECP2-216ENST00000627864 TRMT112Q9UI30 125 aaKnown RBP23.86■■□□□ 1.41
MECP2-216ENST00000627864 PXDNLA1KZ92 1463 aa23.86■■□□□ 1.41
MECP2-216ENST00000627864 ANKRD31Q8N7Z5 1873 aa23.85■■□□□ 1.41
MECP2-216ENST00000627864 NTSR2O95665 410 aa23.85■■□□□ 1.41
MECP2-216ENST00000627864 PRR5LQ6MZQ0 368 aa23.85■■□□□ 1.41
MECP2-216ENST00000627864 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.85■■□□□ 1.41
MECP2-216ENST00000627864 LRP5O75197 1615 aa23.84■■□□□ 1.41
MECP2-216ENST00000627864 KIF13BQ9NQT8 1826 aa23.84■■□□□ 1.41
MECP2-216ENST00000627864 ALDH1L1O75891 902 aa23.84■■□□□ 1.41
MECP2-216ENST00000627864 NUTM1Q86Y26 1132 aa23.84■■□□□ 1.41
MECP2-216ENST00000627864 PPP1R1BQ9UD71 204 aaPredicted RBP23.84■■□□□ 1.41
MECP2-216ENST00000627864 ABCC4O15439 1325 aa23.84■■□□□ 1.41
MECP2-216ENST00000627864 IBTKQ9P2D0 1353 aaPredicted RBP23.83■■□□□ 1.41
MECP2-216ENST00000627864 CCT4P50991 539 aaKnown RBP23.83■■□□□ 1.41
MECP2-216ENST00000627864 GCKRQ14397 625 aa23.83■■□□□ 1.41
MECP2-216ENST00000627864 ERFEQ4G0M1 354 aa23.83■■□□□ 1.41
MECP2-216ENST00000627864 RTL5Q5HYW3 569 aaPredicted RBP23.83■■□□□ 1.41
MECP2-216ENST00000627864 DZIP1LQ8IYY4 767 aaKnown RBP23.83■■□□□ 1.41
MECP2-216ENST00000627864 KLHL34Q8N239 644 aa23.83■■□□□ 1.41
MECP2-216ENST00000627864 JARID2Q92833 1246 aaPredicted RBP23.83■■□□□ 1.41
MECP2-216ENST00000627864 ST5P78524 1137 aa23.82■■□□□ 1.4
MECP2-216ENST00000627864 FTSJ3Q8IY81 847 aaKnown RBP23.82■■□□□ 1.4
MECP2-216ENST00000627864 FAM89AQ96GI7 184 aa23.82■■□□□ 1.4
MECP2-216ENST00000627864 DDX60Q8IY21 1712 aaKnown RBP23.81■■□□□ 1.4
MECP2-216ENST00000627864 MYH3P11055 1940 aa23.81■■□□□ 1.4
MECP2-216ENST00000627864 MS4A1P11836 297 aa23.81■■□□□ 1.4
MECP2-216ENST00000627864 SYNE4Q8N205 404 aa23.81■■□□□ 1.4
MECP2-216ENST00000627864 SH3TC1Q8TE82 1336 aa23.81■■□□□ 1.4
MECP2-216ENST00000627864 LAMB2P55268 1798 aa23.8■■□□□ 1.4
MECP2-216ENST00000627864 PCCAP05165 728 aaPredicted RBP23.8■■□□□ 1.4
MECP2-216ENST00000627864 INTS3Q68E01 1043 aaKnown RBP23.8■■□□□ 1.4
MECP2-216ENST00000627864 ZBTB38Q8NAP3 1195 aaPredicted RBP23.8■■□□□ 1.4
MECP2-216ENST00000627864 RNF123Q5XPI4 1314 aa23.8■■□□□ 1.4
MECP2-216ENST00000627864 RLBP1P12271 317 aa23.79■■□□□ 1.4
MECP2-216ENST00000627864 TMEM57Q8N5G2 664 aa23.79■■□□□ 1.4
MECP2-216ENST00000627864 PANK1Q8TE04 598 aa23.79■■□□□ 1.4
MECP2-216ENST00000627864 C9orf78Q9NZ63 289 aaPredicted RBP23.79■■□□□ 1.4
MECP2-216ENST00000627864 C10orf71Q711Q0 1435 aa23.78■■□□□ 1.4
MECP2-216ENST00000627864 H7C1W4 665 aa23.78■■□□□ 1.4
MECP2-216ENST00000627864 RRP1P56182 461 aaKnown RBP23.78■■□□□ 1.4
MECP2-216ENST00000627864 UBE3BQ7Z3V4 1068 aa23.78■■□□□ 1.4
MECP2-216ENST00000627864 ABCC12Q96J65 1359 aa23.78■■□□□ 1.4
MECP2-216ENST00000627864 HCLS1P14317 486 aaPredicted RBP23.77■■□□□ 1.4
MECP2-216ENST00000627864 SLC10A5Q5PT55 438 aa23.77■■□□□ 1.4
MECP2-216ENST00000627864 BRIP1Q9BX63 1249 aa23.77■■□□□ 1.4
MECP2-216ENST00000627864 SUPT16HQ9Y5B9 1047 aaKnown RBP23.77■■□□□ 1.4
MECP2-216ENST00000627864 TNRC6CQ9HCJ0 1690 aaKnown RBP23.76■■□□□ 1.39
MECP2-216ENST00000627864 GRM8O00222 908 aa23.76■■□□□ 1.39
MECP2-216ENST00000627864 IRS4O14654 1257 aaPredicted RBP23.76■■□□□ 1.39
MECP2-216ENST00000627864 CD2APQ9Y5K6 639 aa23.76■■□□□ 1.39
MECP2-216ENST00000627864 CENPBP07199 599 aaPredicted RBP23.75■■□□□ 1.39
MECP2-216ENST00000627864 FHDC1Q9C0D6 1143 aaPredicted RBP23.75■■□□□ 1.39
MECP2-216ENST00000627864 USP44Q9H0E7 712 aa23.75■■□□□ 1.39
MECP2-216ENST00000627864 CDHR2Q9BYE9 1310 aa23.75■■□□□ 1.39
MECP2-216ENST00000627864 KIAA1551Q9HCM1 1747 aa23.74■■□□□ 1.39
MECP2-216ENST00000627864 PDE6BP35913 854 aa23.74■■□□□ 1.39
MECP2-216ENST00000627864 PDE3AQ14432 1141 aa23.74■■□□□ 1.39
MECP2-216ENST00000627864 C20orf194Q5TEA3 1177 aa23.74■■□□□ 1.39
MECP2-216ENST00000627864 ITPRIPQ8IWB1 547 aa23.74■■□□□ 1.39
MECP2-216ENST00000627864 CACNA1SQ13698 1873 aa23.74■■□□□ 1.39
MECP2-216ENST00000627864 NBPF7P0C2Y1 421 aaPredicted RBP23.73■■□□□ 1.39
MECP2-216ENST00000627864 CASP7P55210 303 aa23.73■■□□□ 1.39
MECP2-216ENST00000627864 NLRP3Q96P20 1036 aa23.73■■□□□ 1.39
MECP2-216ENST00000627864 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
MECP2-216ENST00000627864 HSP90B1P14625 803 aaKnown RBP23.72■■□□□ 1.39
MECP2-216ENST00000627864 COG6Q9Y2V7 657 aa23.72■■□□□ 1.39
MECP2-216ENST00000627864 RIC1Q4ADV7 1423 aa23.72■■□□□ 1.39
MECP2-216ENST00000627864 DLEC1Q9Y238 1755 aa23.72■■□□□ 1.39
MECP2-216ENST00000627864 TAF1P21675 1872 aa23.72■■□□□ 1.39
MECP2-216ENST00000627864 UTYO14607 1347 aa23.71■■□□□ 1.39
MECP2-216ENST00000627864 PDE8AO60658 829 aa23.71■■□□□ 1.39
MECP2-216ENST00000627864 C3orf67Q6ZVT6 689 aa23.71■■□□□ 1.39
MECP2-216ENST00000627864 C2CD5Q86YS7 1000 aa23.71■■□□□ 1.39
MECP2-216ENST00000627864 A0A0G2JLW4 131 aa23.7■■□□□ 1.38
MECP2-216ENST00000627864 H0YIN7 160 aa23.7■■□□□ 1.38
MECP2-216ENST00000627864 CHRNA5P30532 468 aa23.7■■□□□ 1.38
MECP2-216ENST00000627864 TGFB2P61812 414 aa23.7■■□□□ 1.38
MECP2-216ENST00000627864 MEIS3Q99687 375 aa23.7■■□□□ 1.38
MECP2-216ENST00000627864 SYT17Q9BSW7 474 aa23.7■■□□□ 1.38
MECP2-216ENST00000627864 UBTFL1P0CB47 393 aaPredicted RBP23.69■■□□□ 1.38
MECP2-216ENST00000627864 DPEP1P16444 411 aa23.69■■□□□ 1.38
MECP2-216ENST00000627864 MVPQ14764 893 aaKnown RBP23.69■■□□□ 1.38
MECP2-216ENST00000627864 NLGN2Q8NFZ4 835 aa23.69■■□□□ 1.38
MECP2-216ENST00000627864 KLRG2A4D1S0 409 aaPredicted RBP23.68■■□□□ 1.38
MECP2-216ENST00000627864 GNAI3P08754 354 aa23.68■■□□□ 1.38
MECP2-216ENST00000627864 SUCLG2Q96I99 432 aa23.68■■□□□ 1.38
MECP2-216ENST00000627864 PDZRN3Q9UPQ7 1066 aa23.68■■□□□ 1.38
MECP2-216ENST00000627864 BRCA1P38398 1863 aaKnown RBP23.68■■□□□ 1.38
MECP2-216ENST00000627864 PLA2G12BQ9BX93 195 aa23.67■■□□□ 1.38
MECP2-216ENST00000627864 RPGRQ92834 1020 aaKnown RBP23.66■■□□□ 1.38
MECP2-216ENST00000627864 ZNF622Q969S3 477 aaKnown RBP eCLIP23.66■■□□□ 1.38
MECP2-216ENST00000627864 DDX19BQ9UMR2 479 aa23.66■■□□□ 1.38
MECP2-216ENST00000627864 ZBTB7BO15156 539 aaPredicted RBP23.65■■□□□ 1.38
MECP2-216ENST00000627864 SRGNP10124 158 aa23.65■■□□□ 1.38
MECP2-216ENST00000627864 CTSWP56202 376 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms