RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SLC26A6Q9BXS9 759 aa14.78□□□□□ -0.04
SCN8A-209ENST00000627620 STX1AQ16623 288 aa14.78□□□□□ -0.04
SCN8A-209ENST00000627620 FANCAO15360 1455 aa14.78□□□□□ -0.04
SCN8A-209ENST00000627620 UQCRFS1P1P0C7P4 283 aa14.78□□□□□ -0.04
SCN8A-209ENST00000627620 LIG1P18858 919 aa14.78□□□□□ -0.04
SCN8A-209ENST00000627620 CCDC150Q8NCX0 1101 aa14.77□□□□□ -0.04
SCN8A-209ENST00000627620 CABP5Q9NP86 173 aa14.77□□□□□ -0.04
SCN8A-209ENST00000627620 RFC4P35249 363 aa14.77□□□□□ -0.04
SCN8A-209ENST00000627620 DHX37Q8IY37 1157 aaKnown RBP14.77□□□□□ -0.04
SCN8A-209ENST00000627620 TRMT1Q9NXH9 659 aaKnown RBP14.77□□□□□ -0.04
SCN8A-209ENST00000627620 CHPF2Q9P2E5 772 aa14.77□□□□□ -0.04
SCN8A-209ENST00000627620 CCDC113Q9H0I3 377 aa14.77□□□□□ -0.05
SCN8A-209ENST00000627620 HLA-DOAP06340 250 aa14.77□□□□□ -0.05
SCN8A-209ENST00000627620 MAP9Q49MG5 647 aa14.77□□□□□ -0.05
SCN8A-209ENST00000627620 CADPS2Q86UW7 1296 aa14.77□□□□□ -0.05
SCN8A-209ENST00000627620 UBA7P41226 1012 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 CCDC40Q4G0X9 1142 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 TRMT1LQ7Z2T5 733 aaKnown RBP14.76□□□□□ -0.05
SCN8A-209ENST00000627620 TMC6Q7Z403 805 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 PAFAH1B1P43034 410 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 ANAPC15P60006 121 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 CCDC152Q4G0S7 254 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 DYDC1Q8WWB3 177 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 MCM5P33992 734 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 TCERG1LQ5VWI1 586 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 ARHGAP45Q92619 1136 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 ERICH4A6NGS2 130 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 CETN1Q12798 172 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 CRNKL1Q9BZJ0 848 aaKnown RBP14.76□□□□□ -0.05
SCN8A-209ENST00000627620 CTNNBL1Q8WYA6 563 aaPredicted RBP14.76□□□□□ -0.05
SCN8A-209ENST00000627620 MEIS3Q99687 375 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 TMX1Q9H3N1 280 aa14.76□□□□□ -0.05
SCN8A-209ENST00000627620 GSTTP1A0A1W2PQM5 241 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 NEMFO60524 1076 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 NBPF6Q5VWK0 638 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 NBPF5PQ86XG9 351 aaPredicted RBP14.75□□□□□ -0.05
SCN8A-209ENST00000627620 NBPF4Q96M43 638 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 TNNT1P13805 278 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 GSDMDP57764 484 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 ZNF622Q969S3 477 aaKnown RBP eCLIP14.75□□□□□ -0.05
SCN8A-209ENST00000627620 MAP3K1Q13233 1512 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 MACROD2A1Z1Q3 448 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 NUCB1Q02818 461 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 CCDC102BQ68D86 513 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 PYM1Q9BRP8 204 aaKnown RBP14.75□□□□□ -0.05
SCN8A-209ENST00000627620 MCM3P25205 808 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 ISM2Q6H9L7 571 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 XAGE3Q8WTP9 111 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 BRF1Q92994 677 aa14.75□□□□□ -0.05
SCN8A-209ENST00000627620 KANK3Q6NY19 840 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 LAMC3Q9Y6N6 1575 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 TBC1D32Q96NH3 1257 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 GOPCQ9HD26 462 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 KLF18A0A0U1RQI7 1052 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 SDSP20132 328 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 ZNF165P49910 485 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 UBE2HP62256 183 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 GSTO1P78417 241 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 HDAC1Q13547 482 aaPredicted RBP14.74□□□□□ -0.05
SCN8A-209ENST00000627620 IFFO1Q0D2I5 559 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 WTAPQ15007 396 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 COPS6Q7L5N1 327 aa14.74□□□□□ -0.05
SCN8A-209ENST00000627620 C16orf45Q96MC5 204 aaPredicted RBP14.74□□□□□ -0.05
SCN8A-209ENST00000627620 ADCY5O95622 1261 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 CCDC91Q7Z6B0 441 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 ZCRB1Q8TBF4 217 aaKnown RBP14.73□□□□□ -0.05
SCN8A-209ENST00000627620 STX8Q9UNK0 236 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 USP8P40818 1118 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 ST5P78524 1137 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 FAM114A1Q8IWE2 563 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 TTC21AQ8NDW8 1320 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 NECAB1Q8N987 351 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 ZSCAN16Q9H4T2 348 aaPredicted RBP14.73□□□□□ -0.05
SCN8A-209ENST00000627620 SAMM50Q9Y512 469 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 TNRQ92752 1358 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
SCN8A-209ENST00000627620 MAP2K1Q02750 393 aaPredicted RBP14.73□□□□□ -0.05
SCN8A-209ENST00000627620 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
SCN8A-209ENST00000627620 STXBP4Q6ZWJ1 553 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 ALS2CR12Q96Q35 445 aa14.73□□□□□ -0.05
SCN8A-209ENST00000627620 ZFYP08048 801 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-209ENST00000627620 SLC39A6Q13433 755 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 KRT23Q9C075 422 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 SYCP3Q8IZU3 236 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 RALGAPBQ86X10 1494 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 SHTN1A0MZ66 631 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 CYP7A1P22680 504 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 ATP2B3Q16720 1220 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
SCN8A-209ENST00000627620 TMCO5BA8MYB1 307 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 LRRC2Q9BYS8 371 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 ZBTB43O43298 467 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 PDE1AP54750 535 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 SLC4A4Q9Y6R1 1079 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 NBPF7P0C2Y1 421 aaPredicted RBP14.71□□□□□ -0.05
SCN8A-209ENST00000627620 TSPY3P0CV98 308 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 TSPY8P0CW00 308 aa14.71□□□□□ -0.05
SCN8A-209ENST00000627620 ZSCAN22P10073 491 aaPredicted RBP14.71□□□□□ -0.05
SCN8A-209ENST00000627620 LRRC27Q9C0I9 530 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms