RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
DDX41-218ENST00000625286 FMR1Q06787 632 aaKnown RBP eCLIP14.67□□□□□ -0.06
DDX41-218ENST00000625286 PDIA6Q15084 440 aa14.67□□□□□ -0.06
DDX41-218ENST00000625286 MAP1SQ66K74 1059 aaPredicted RBP14.67□□□□□ -0.06
DDX41-218ENST00000625286 ZNF34Q8IZ26 560 aa14.67□□□□□ -0.06
DDX41-218ENST00000625286 ZBTB3Q9H5J0 574 aa14.67□□□□□ -0.06
DDX41-218ENST00000625286 TMEM88BA6NKF7 163 aa14.66□□□□□ -0.06
DDX41-218ENST00000625286 NFE2L2Q16236 605 aa14.66□□□□□ -0.06
DDX41-218ENST00000625286 CNTROBQ8N137 903 aa14.66□□□□□ -0.06
DDX41-218ENST00000625286 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
DDX41-218ENST00000625286 NTSR2O95665 410 aa14.65□□□□□ -0.06
DDX41-218ENST00000625286 GPC2Q8N158 579 aa14.65□□□□□ -0.06
DDX41-218ENST00000625286 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
DDX41-218ENST00000625286 TCERG1O14776 1098 aaKnown RBP14.64□□□□□ -0.07
DDX41-218ENST00000625286 EPS15P42566 896 aa14.64□□□□□ -0.07
DDX41-218ENST00000625286 PROSER3Q2NL68 480 aa14.64□□□□□ -0.07
DDX41-218ENST00000625286 GIGYF2Q6Y7W6 1299 aaKnown RBP14.64□□□□□ -0.07
DDX41-218ENST00000625286 NYXQ9GZU5 481 aa14.64□□□□□ -0.07
DDX41-218ENST00000625286 ANXA1P04083 346 aa14.63□□□□□ -0.07
DDX41-218ENST00000625286 SCNN1DP51172 638 aa14.63□□□□□ -0.07
DDX41-218ENST00000625286 PNMA8AQ86V59 439 aaPredicted RBP14.63□□□□□ -0.07
DDX41-218ENST00000625286 CRAMP1Q96RY5 1269 aa14.63□□□□□ -0.07
DDX41-218ENST00000625286 WBP1LQ9NX94 342 aa14.63□□□□□ -0.07
DDX41-218ENST00000625286 GJA3Q9Y6H8 435 aa14.63□□□□□ -0.07
DDX41-218ENST00000625286 RIC1Q4ADV7 1423 aa14.63□□□□□ -0.07
DDX41-218ENST00000625286 IBTKQ9P2D0 1353 aaPredicted RBP14.62□□□□□ -0.07
DDX41-218ENST00000625286 RASSF10A6NK89 507 aa14.62□□□□□ -0.07
DDX41-218ENST00000625286 KIF6Q6ZMV9 814 aa14.62□□□□□ -0.07
DDX41-218ENST00000625286 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
DDX41-218ENST00000625286 SLC10A5Q5PT55 438 aa14.61□□□□□ -0.07
DDX41-218ENST00000625286 CC2D2BQ6DHV5 1058 aa14.61□□□□□ -0.07
DDX41-218ENST00000625286 JDP2Q8WYK2 163 aa14.61□□□□□ -0.07
DDX41-218ENST00000625286 PPEF1O14829 653 aaPredicted RBP14.6□□□□□ -0.07
DDX41-218ENST00000625286 EIF2S2P20042 333 aaKnown RBP14.6□□□□□ -0.07
DDX41-218ENST00000625286 DEFB115Q30KQ5 88 aa14.6□□□□□ -0.07
DDX41-218ENST00000625286 CST9Q5W186 159 aa14.6□□□□□ -0.07
DDX41-218ENST00000625286 LARGE2Q8N3Y3 721 aa14.6□□□□□ -0.07
DDX41-218ENST00000625286 RBM17Q96I25 401 aaKnown RBP14.6□□□□□ -0.07
DDX41-218ENST00000625286 PRDM10Q9NQV6 1147 aa14.6□□□□□ -0.07
DDX41-218ENST00000625286 DDX21Q9NR30 783 aaKnown RBP eCLIP14.6□□□□□ -0.07
DDX41-218ENST00000625286 TAF1P21675 1872 aa14.59□□□□□ -0.07
DDX41-218ENST00000625286 TRAF5O00463 557 aa14.59□□□□□ -0.07
DDX41-218ENST00000625286 LBX1P52954 281 aa14.59□□□□□ -0.07
DDX41-218ENST00000625286 EIF6P56537 245 aaKnown RBP14.59□□□□□ -0.07
DDX41-218ENST00000625286 AOC3Q16853 763 aa14.59□□□□□ -0.07
DDX41-218ENST00000625286 TSPYL4Q9UJ04 414 aa14.59□□□□□ -0.07
DDX41-218ENST00000625286 ERBB4Q15303 1308 aa14.59□□□□□ -0.07
DDX41-218ENST00000625286 LAMB2P55268 1798 aa14.58□□□□□ -0.08
DDX41-218ENST00000625286 CTCFP49711 727 aaPredicted RBP14.58□□□□□ -0.08
DDX41-218ENST00000625286 RIPK4P57078 832 aa14.58□□□□□ -0.08
DDX41-218ENST00000625286 KRT24Q2M2I5 525 aa14.58□□□□□ -0.08
DDX41-218ENST00000625286 ATP6V0A2Q9Y487 856 aa14.58□□□□□ -0.08
DDX41-218ENST00000625286 ABCC4O15439 1325 aa14.58□□□□□ -0.08
DDX41-218ENST00000625286 WDR33Q9C0J8 1336 aaKnown RBP14.58□□□□□ -0.08
DDX41-218ENST00000625286 NEFMP07197 916 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 HSPA8P11142 646 aaKnown RBP14.57□□□□□ -0.08
DDX41-218ENST00000625286 CXCL9Q07325 125 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 PARP10Q53GL7 1025 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 COPS6Q7L5N1 327 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 PPP1R42Q7Z4L9 355 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 NECTIN2Q92692 538 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 ZNF428Q96B54 188 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 NLRP3Q96P20 1036 aa14.57□□□□□ -0.08
DDX41-218ENST00000625286 UTP14AQ9BVJ6 771 aaKnown RBP14.57□□□□□ -0.08
DDX41-218ENST00000625286 RTFDC1Q9BY42 306 aaPredicted RBP14.57□□□□□ -0.08
DDX41-218ENST00000625286 PPIP5K2O43314 1243 aa14.56□□□□□ -0.08
DDX41-218ENST00000625286 HCLS1P14317 486 aaPredicted RBP14.56□□□□□ -0.08
DDX41-218ENST00000625286 TMPOP42166 694 aaKnown RBP14.56□□□□□ -0.08
DDX41-218ENST00000625286 GRIPAP1Q4V328 841 aa14.56□□□□□ -0.08
DDX41-218ENST00000625286 NLRP10Q86W26 655 aa14.56□□□□□ -0.08
DDX41-218ENST00000625286 GPRC5DQ9NZD1 345 aa14.56□□□□□ -0.08
DDX41-218ENST00000625286 ABT1Q9ULW3 272 aaKnown RBP14.56□□□□□ -0.08
DDX41-218ENST00000625286 TRPM7Q96QT4 1865 aa14.55□□□□□ -0.08
DDX41-218ENST00000625286 LMOD1P29536 600 aaPredicted RBP14.55□□□□□ -0.08
DDX41-218ENST00000625286 HIRAP54198 1017 aaPredicted RBP14.55□□□□□ -0.08
DDX41-218ENST00000625286 AIMP1Q12904 312 aaKnown RBP14.55□□□□□ -0.08
DDX41-218ENST00000625286 USP50Q70EL3 339 aaPredicted RBP14.55□□□□□ -0.08
DDX41-218ENST00000625286 NIM1KQ8IY84 436 aa14.55□□□□□ -0.08
DDX41-218ENST00000625286 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
DDX41-218ENST00000625286 MAPK8IP3Q9UPT6 1336 aa14.55□□□□□ -0.08
DDX41-218ENST00000625286 ANKRD36CQ5JPF3 1778 aa14.55□□□□□ -0.08
DDX41-218ENST00000625286 SHTN1A0MZ66 631 aa14.54□□□□□ -0.08
DDX41-218ENST00000625286 CYP4F22Q6NT55 531 aa14.54□□□□□ -0.08
DDX41-218ENST00000625286 SP8Q8IXZ3 490 aa14.54□□□□□ -0.08
DDX41-218ENST00000625286 AIDAQ96BJ3 306 aa14.54□□□□□ -0.08
DDX41-218ENST00000625286 ZNRF3Q9ULT6 936 aa14.54□□□□□ -0.08
DDX41-218ENST00000625286 COL4A1P02462 1669 aa14.54□□□□□ -0.08
DDX41-218ENST00000625286 YDJCA8MPS7 323 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 CHL1O00533 1208 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 BBOX1O75936 387 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 GMPSP49915 693 aaPredicted RBP14.53□□□□□ -0.08
DDX41-218ENST00000625286 TCIRG1Q13488 830 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 CAPNS2Q96L46 248 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 VPS33BQ9H267 617 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 PNNQ9H307 717 aaKnown RBP14.53□□□□□ -0.08
DDX41-218ENST00000625286 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 PGAP2Q9UHJ9 254 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 TRIM35Q9UPQ4 493 aa14.53□□□□□ -0.08
DDX41-218ENST00000625286 AOC2O75106 756 aa14.52□□□□□ -0.09
DDX41-218ENST00000625286 DLK2Q6UY11 383 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms