RNA–Protein interactions for RNA: ENST00000625044.1

PCDHB16-202, Transcript of protocadherin beta 16, humanhuman

TSL 2

Gene PCDHB16, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-202ENST00000625044 NPR1P16066 1061 aa25.91■■□□□ 1.74
PCDHB16-202ENST00000625044 RIC3Q7Z5B4 369 aa25.91■■□□□ 1.74
PCDHB16-202ENST00000625044 CNKSR1Q969H4 720 aa25.91■■□□□ 1.74
PCDHB16-202ENST00000625044 ISCA1Q9BUE6 129 aa25.91■■□□□ 1.74
PCDHB16-202ENST00000625044 ATP5J2-PTCD1G3V325 749 aa25.9■■□□□ 1.74
PCDHB16-202ENST00000625044 CRY2Q49AN0 593 aa25.9■■□□□ 1.74
PCDHB16-202ENST00000625044 RNF123Q5XPI4 1314 aa25.89■■□□□ 1.74
PCDHB16-202ENST00000625044 SLC4A2P04920 1241 aa25.89■■□□□ 1.74
PCDHB16-202ENST00000625044 ZNF784Q8NCA9 323 aaPredicted RBP25.89■■□□□ 1.74
PCDHB16-202ENST00000625044 ARFGEF2Q9Y6D5 1785 aa25.88■■□□□ 1.73
PCDHB16-202ENST00000625044 DDX58O95786 925 aaKnown RBP25.88■■□□□ 1.73
PCDHB16-202ENST00000625044 SLC10A5Q5PT55 438 aa25.88■■□□□ 1.73
PCDHB16-202ENST00000625044 PRPF40BQ6NWY9 871 aaKnown RBP25.88■■□□□ 1.73
PCDHB16-202ENST00000625044 ZNF428Q96B54 188 aa25.88■■□□□ 1.73
PCDHB16-202ENST00000625044 TRIM28Q13263 835 aaKnown RBP25.87■■□□□ 1.73
PCDHB16-202ENST00000625044 C3orf67Q6ZVT6 689 aa25.87■■□□□ 1.73
PCDHB16-202ENST00000625044 G2E3Q7L622 706 aa25.87■■□□□ 1.73
PCDHB16-202ENST00000625044 SYNE4Q8N205 404 aa25.87■■□□□ 1.73
PCDHB16-202ENST00000625044 TRMT112Q9UI30 125 aaKnown RBP25.87■■□□□ 1.73
PCDHB16-202ENST00000625044 ADCY9O60503 1353 aa25.86■■□□□ 1.73
PCDHB16-202ENST00000625044 E9PSI1 815 aa25.86■■□□□ 1.73
PCDHB16-202ENST00000625044 C21orf2O43822 256 aa25.86■■□□□ 1.73
PCDHB16-202ENST00000625044 ZNF219Q9P2Y4 722 aaPredicted RBP25.85■■□□□ 1.73
PCDHB16-202ENST00000625044 MAP3K2Q9Y2U5 619 aa25.85■■□□□ 1.73
PCDHB16-202ENST00000625044 SLX4Q8IY92 1834 aa25.85■■□□□ 1.73
PCDHB16-202ENST00000625044 SH3TC1Q8TE82 1336 aa25.85■■□□□ 1.73
PCDHB16-202ENST00000625044 SLFN5Q08AF3 891 aa25.84■■□□□ 1.73
PCDHB16-202ENST00000625044 KSR2Q6VAB6 950 aa25.84■■□□□ 1.73
PCDHB16-202ENST00000625044 MYD88Q99836 296 aa25.84■■□□□ 1.73
PCDHB16-202ENST00000625044 METTL22Q9BUU2 404 aaPredicted RBP25.84■■□□□ 1.73
PCDHB16-202ENST00000625044 PI4KAP2A4QPH2 592 aa25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 HCLS1P14317 486 aaPredicted RBP25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 HOXA10P31260 410 aaPredicted RBP25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 RASSF7Q02833 373 aa25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 PI4KAP1Q8N8J0 262 aa25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 C7orf43Q8WVR3 580 aa25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 RPGRQ92834 1020 aaKnown RBP25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 CDCA7LQ96GN5 454 aa25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 NLRP3Q96P20 1036 aa25.83■■□□□ 1.73
PCDHB16-202ENST00000625044 FLIIQ13045 1269 aa25.82■■□□□ 1.72
PCDHB16-202ENST00000625044 C9orf131Q5VYM1 1079 aa25.82■■□□□ 1.72
PCDHB16-202ENST00000625044 NFKBIEO00221 500 aa25.81■■□□□ 1.72
PCDHB16-202ENST00000625044 ALDH1B1P30837 517 aa25.81■■□□□ 1.72
PCDHB16-202ENST00000625044 FAM89AQ96GI7 184 aa25.81■■□□□ 1.72
PCDHB16-202ENST00000625044 CCDC191Q8NCU4 936 aa25.79■■□□□ 1.72
PCDHB16-202ENST00000625044 CACNA1SQ13698 1873 aa25.79■■□□□ 1.72
PCDHB16-202ENST00000625044 IGKV5-2P06315 115 aa25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 PRELPP51888 382 aa25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 FKBP5Q13451 457 aaPredicted RBP25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 SOGA3Q5TF21 947 aa25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 TRMT2AQ8IZ69 625 aaKnown RBP25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 RBM17Q96I25 401 aaKnown RBP25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 CRAMP1Q96RY5 1269 aa25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 RNF181Q9P0P0 153 aa25.78■■□□□ 1.72
PCDHB16-202ENST00000625044 RTL5Q5HYW3 569 aaPredicted RBP25.77■■□□□ 1.72
PCDHB16-202ENST00000625044 OLFM4Q6UX06 510 aa25.77■■□□□ 1.72
PCDHB16-202ENST00000625044 ZBTB38Q8NAP3 1195 aaPredicted RBP25.77■■□□□ 1.72
PCDHB16-202ENST00000625044 CWC25Q9NXE8 425 aaPredicted RBP25.77■■□□□ 1.72
PCDHB16-202ENST00000625044 LMNB1P20700 586 aa25.76■■□□□ 1.71
PCDHB16-202ENST00000625044 CACNA1FO60840 1977 aa25.75■■□□□ 1.71
PCDHB16-202ENST00000625044 NEXNQ0ZGT2 675 aa25.75■■□□□ 1.71
PCDHB16-202ENST00000625044 CCDC93Q567U6 631 aa25.75■■□□□ 1.71
PCDHB16-202ENST00000625044 SBF1O95248 1867 aa25.74■■□□□ 1.71
PCDHB16-202ENST00000625044 LTBP3Q9NS15 1303 aa25.74■■□□□ 1.71
PCDHB16-202ENST00000625044 IRS4O14654 1257 aaPredicted RBP25.74■■□□□ 1.71
PCDHB16-202ENST00000625044 TAOK3Q9H2K8 898 aa25.74■■□□□ 1.71
PCDHB16-202ENST00000625044 FER1L6Q2WGJ9 1857 aa25.74■■□□□ 1.71
PCDHB16-202ENST00000625044 LAMB2P55268 1798 aa25.74■■□□□ 1.71
PCDHB16-202ENST00000625044 DDX60Q8IY21 1712 aaKnown RBP25.74■■□□□ 1.71
PCDHB16-202ENST00000625044 PCCAP05165 728 aaPredicted RBP25.73■■□□□ 1.71
PCDHB16-202ENST00000625044 CWF19L2Q2TBE0 894 aaKnown RBP25.73■■□□□ 1.71
PCDHB16-202ENST00000625044 DNAAF4Q8WXU2 420 aa25.73■■□□□ 1.71
PCDHB16-202ENST00000625044 ABCC4O15439 1325 aa25.72■■□□□ 1.71
PCDHB16-202ENST00000625044 NEURL1BA8MQ27 555 aa25.72■■□□□ 1.71
PCDHB16-202ENST00000625044 ZNF526Q8TF50 670 aaPredicted RBP25.72■■□□□ 1.71
PCDHB16-202ENST00000625044 JARID2Q92833 1246 aaPredicted RBP25.72■■□□□ 1.71
PCDHB16-202ENST00000625044 PPEF1O14829 653 aaPredicted RBP25.71■■□□□ 1.71
PCDHB16-202ENST00000625044 SF3B3Q15393 1217 aaKnown RBP25.71■■□□□ 1.71
PCDHB16-202ENST00000625044 SLC51AQ86UW1 340 aa25.71■■□□□ 1.71
PCDHB16-202ENST00000625044 SNED1Q8TER0 1413 aa25.71■■□□□ 1.71
PCDHB16-202ENST00000625044 RTKN2Q8IZC4 609 aa25.7■■□□□ 1.7
PCDHB16-202ENST00000625044 F6X3S4 739 aa25.69■■□□□ 1.7
PCDHB16-202ENST00000625044 CC2D2BQ6DHV5 1058 aa25.69■■□□□ 1.7
PCDHB16-202ENST00000625044 DDX46Q7L014 1031 aaKnown RBP25.69■■□□□ 1.7
PCDHB16-202ENST00000625044 GPBP1L1Q9HC44 474 aaPredicted RBP25.69■■□□□ 1.7
PCDHB16-202ENST00000625044 HSP90B1P14625 803 aaKnown RBP25.68■■□□□ 1.7
PCDHB16-202ENST00000625044 HNRNPUQ00839 825 aaKnown RBP eCLIP25.68■■□□□ 1.7
PCDHB16-202ENST00000625044 FKBP4Q02790 459 aaKnown RBP eCLIP25.68■■□□□ 1.7
PCDHB16-202ENST00000625044 MRPL50Q8N5N7 158 aaKnown RBP25.68■■□□□ 1.7
PCDHB16-202ENST00000625044 LINS1Q8NG48 757 aa25.68■■□□□ 1.7
PCDHB16-202ENST00000625044 SSH1Q8WYL5 1049 aa25.68■■□□□ 1.7
PCDHB16-202ENST00000625044 ZC3H4Q9UPT8 1303 aaKnown RBP25.67■■□□□ 1.7
PCDHB16-202ENST00000625044 BBOX1O75936 387 aa25.67■■□□□ 1.7
PCDHB16-202ENST00000625044 GRAPQ13588 217 aa25.67■■□□□ 1.7
PCDHB16-202ENST00000625044 GCKRQ14397 625 aa25.67■■□□□ 1.7
PCDHB16-202ENST00000625044 GRAPLQ8TC17 118 aaPredicted RBP25.67■■□□□ 1.7
PCDHB16-202ENST00000625044 ATP6V0A2Q9Y487 856 aa25.67■■□□□ 1.7
PCDHB16-202ENST00000625044 CDHR2Q9BYE9 1310 aa25.66■■□□□ 1.7
PCDHB16-202ENST00000625044 PDE8AO60658 829 aa25.65■■□□□ 1.7
PCDHB16-202ENST00000625044 BEND3Q5T5X7 828 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms