RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 C1QTNF9BB2RNN3 333 aa7.6□□□□□ -1.19
CDKL5-207ENST00000624700 FAM157BP0CG42 384 aa7.6□□□□□ -1.19
CDKL5-207ENST00000624700 SLC9A9Q8IVB4 645 aa7.6□□□□□ -1.19
CDKL5-207ENST00000624700 TSPAN10Q9H1Z9 355 aaPredicted RBP7.6□□□□□ -1.19
CDKL5-207ENST00000624700 PRR12Q9ULL5 1215 aa7.6□□□□□ -1.19
CDKL5-207ENST00000624700 GNEQ9Y223 722 aaKnown RBP7.6□□□□□ -1.19
CDKL5-207ENST00000624700 SERTM1A2A2V5 107 aa7.59□□□□□ -1.19
CDKL5-207ENST00000624700 NOS2P35228 1153 aa7.59□□□□□ -1.19
CDKL5-207ENST00000624700 SAMD5Q5TGI4 173 aa7.59□□□□□ -1.19
CDKL5-207ENST00000624700 ZNF468Q5VIY5 522 aaPredicted RBP7.59□□□□□ -1.19
CDKL5-207ENST00000624700 CD163Q86VB7 1156 aa7.59□□□□□ -1.19
CDKL5-207ENST00000624700 FCHSD1Q86WN1 690 aa7.59□□□□□ -1.19
CDKL5-207ENST00000624700 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
CDKL5-207ENST00000624700 CARNS1A5YM72 827 aa7.58□□□□□ -1.2
CDKL5-207ENST00000624700 HIRAP54198 1017 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-207ENST00000624700 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
CDKL5-207ENST00000624700 LAMC2Q13753 1193 aa7.58□□□□□ -1.2
CDKL5-207ENST00000624700 BICDL1Q6ZP65 573 aa7.58□□□□□ -1.2
CDKL5-207ENST00000624700 CHMP7Q8WUX9 453 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-207ENST00000624700 C2orf49Q9BVC5 232 aaPredicted RBP7.58□□□□□ -1.2
CDKL5-207ENST00000624700 MARK1Q9P0L2 795 aa7.58□□□□□ -1.2
CDKL5-207ENST00000624700 PARP3Q9Y6F1 533 aa7.58□□□□□ -1.2
CDKL5-207ENST00000624700 C21orf2O43822 256 aa7.57□□□□□ -1.2
CDKL5-207ENST00000624700 C1orf53Q5VUE5 145 aa7.57□□□□□ -1.2
CDKL5-207ENST00000624700 PHLDB3Q6NSJ2 640 aa7.57□□□□□ -1.2
CDKL5-207ENST00000624700 POTEAQ6S8J7 498 aa7.57□□□□□ -1.2
CDKL5-207ENST00000624700 L3MBTL2Q969R5 705 aa7.57□□□□□ -1.2
CDKL5-207ENST00000624700 ZNF232Q9UNY5 417 aa7.57□□□□□ -1.2
CDKL5-207ENST00000624700 EFSO43281 561 aa7.56□□□□□ -1.2
CDKL5-207ENST00000624700 CHRNA4P43681 627 aa7.56□□□□□ -1.2
CDKL5-207ENST00000624700 HIF1AQ16665 826 aa7.56□□□□□ -1.2
CDKL5-207ENST00000624700 TXNDC2Q86VQ3 553 aa7.56□□□□□ -1.2
CDKL5-207ENST00000624700 SLAIN2Q9P270 581 aa7.56□□□□□ -1.2
CDKL5-207ENST00000624700 GPC6Q9Y625 555 aaPredicted RBP7.56□□□□□ -1.2
CDKL5-207ENST00000624700 FKBP5Q13451 457 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-207ENST00000624700 STRN4Q9NRL3 753 aa7.55□□□□□ -1.2
CDKL5-207ENST00000624700 EGFL7Q9UHF1 273 aa7.55□□□□□ -1.2
CDKL5-207ENST00000624700 TXLNAP40222 546 aa7.54□□□□□ -1.2
CDKL5-207ENST00000624700 ZDHHC1Q8WTX9 485 aa7.54□□□□□ -1.2
CDKL5-207ENST00000624700 TRIM11Q96F44 468 aa7.54□□□□□ -1.2
CDKL5-207ENST00000624700 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
CDKL5-207ENST00000624700 ELOA3CA0A087WX78 387 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-207ENST00000624700 ELOA3DA6NLF2 546 aaPredicted RBP7.53□□□□□ -1.2
CDKL5-207ENST00000624700 EML1O00423 815 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 ALAS2P22557 587 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
CDKL5-207ENST00000624700 ELOA3BQ3SY89 546 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 Q8N3U1 123 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 ELOA3Q8NG57 546 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 MYO19Q96H55 970 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 NEUROD4Q9HD90 331 aa7.53□□□□□ -1.2
CDKL5-207ENST00000624700 LGR5O75473 907 aa7.52□□□□□ -1.21
CDKL5-207ENST00000624700 SPATA31C1P0DKV0 1188 aa7.52□□□□□ -1.21
CDKL5-207ENST00000624700 C16orf46Q6P387 395 aa7.52□□□□□ -1.21
CDKL5-207ENST00000624700 LRRC69Q6ZNQ3 347 aa7.52□□□□□ -1.21
CDKL5-207ENST00000624700 SYT9Q86SS6 491 aa7.52□□□□□ -1.21
CDKL5-207ENST00000624700 ANKIB1Q9P2G1 1089 aa7.52□□□□□ -1.21
CDKL5-207ENST00000624700 FKBP4Q02790 459 aaKnown RBP eCLIP7.51□□□□□ -1.21
CDKL5-207ENST00000624700 RTN1Q16799 776 aa7.51□□□□□ -1.21
CDKL5-207ENST00000624700 ALDH16A1Q8IZ83 802 aa7.51□□□□□ -1.21
CDKL5-207ENST00000624700 MDFIQ99750 246 aa7.51□□□□□ -1.21
CDKL5-207ENST00000624700 HCN4Q9Y3Q4 1203 aa7.51□□□□□ -1.21
CDKL5-207ENST00000624700 IVNS1ABPQ9Y6Y0 642 aa7.51□□□□□ -1.21
CDKL5-207ENST00000624700 SPDYE3A6NKU9 549 aa7.5□□□□□ -1.21
CDKL5-207ENST00000624700 SIN3BO75182 1162 aa7.5□□□□□ -1.21
CDKL5-207ENST00000624700 BRD2P25440 801 aaKnown RBP7.5□□□□□ -1.21
CDKL5-207ENST00000624700 GATA4P43694 442 aa7.5□□□□□ -1.21
CDKL5-207ENST00000624700 DOC2BQ14184 412 aa7.5□□□□□ -1.21
CDKL5-207ENST00000624700 C11orf91Q3C1V1 193 aa7.5□□□□□ -1.21
CDKL5-207ENST00000624700 GTF3C2Q8WUA4 911 aaPredicted RBP7.5□□□□□ -1.21
CDKL5-207ENST00000624700 C7orf43Q8WVR3 580 aa7.5□□□□□ -1.21
CDKL5-207ENST00000624700 ADARB2-AS1A8MUL3 147 aa7.49□□□□□ -1.21
CDKL5-207ENST00000624700 FAM13AO94988 1023 aa7.49□□□□□ -1.21
CDKL5-207ENST00000624700 TRIM26Q12899 539 aaPredicted RBP7.49□□□□□ -1.21
CDKL5-207ENST00000624700 ALKBH2Q6NS38 261 aa7.49□□□□□ -1.21
CDKL5-207ENST00000624700 HELQQ8TDG4 1101 aa7.49□□□□□ -1.21
CDKL5-207ENST00000624700 MKNK1Q9BUB5 465 aa7.49□□□□□ -1.21
CDKL5-207ENST00000624700 PHACTR1Q9C0D0 580 aa7.49□□□□□ -1.21
CDKL5-207ENST00000624700 SEMA6BQ9H3T3 888 aa7.49□□□□□ -1.21
CDKL5-207ENST00000624700 ABL1P00519 1130 aa7.48□□□□□ -1.21
CDKL5-207ENST00000624700 NAA30Q147X3 362 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-207ENST00000624700 PRRT3Q5FWE3 981 aa7.48□□□□□ -1.21
CDKL5-207ENST00000624700 GZF1Q9H116 711 aaPredicted RBP7.48□□□□□ -1.21
CDKL5-207ENST00000624700 SEPT3Q9UH03 358 aa7.48□□□□□ -1.21
CDKL5-207ENST00000624700 ICMTO60725 284 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 SFSWAPQ12872 951 aaKnown RBP7.47□□□□□ -1.21
CDKL5-207ENST00000624700 COX20Q5RI15 118 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 ABTB2Q8N961 1025 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 RHPN1Q8TCX5 695 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 NGLY1Q96IV0 654 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 SLC30A3Q99726 388 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 PRDM6Q9NQX0 595 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 STIM2Q9P246 746 aa7.47□□□□□ -1.21
CDKL5-207ENST00000624700 SOWAHDA6NJG2 315 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 M0R082 166 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 NPR3P17342 541 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 ITGB7P26010 798 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 SPEM2Q0P670 501 aa7.46□□□□□ -1.22
CDKL5-207ENST00000624700 NEUROD1Q13562 356 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms