RNA–Protein interactions for RNA: ENST00000623527.3

CDHR1-206, Transcript of cadherin related family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR1, Length 6,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-206ENST00000623527 KRT222Q8N1A0 295 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 RAB34Q9BZG1 259 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 HSF2BPO75031 334 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 FGFR1OPO95684 399 aaKnown RBP12.47□□□□□ -0.41
CDHR1-206ENST00000623527 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 TRMT112Q9UI30 125 aaKnown RBP12.47□□□□□ -0.41
CDHR1-206ENST00000623527 SAMM50Q9Y512 469 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 MARCKSP29966 332 aaPredicted RBP12.47□□□□□ -0.41
CDHR1-206ENST00000623527 UBE2HP62256 183 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 CCDC6Q16204 474 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 SYCP3Q8IZU3 236 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 DNAJC25Q9H1X3 360 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 STARD3NLO95772 234 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 MXRA7P84157 204 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 CATIPQ7Z7H3 387 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 CEP57Q86XR8 500 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 NEMFO60524 1076 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 NME9Q86XW9 330 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 BRF1Q92994 677 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 CAPZA3Q96KX2 299 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 TCP11L1Q9NUJ3 509 aa12.47□□□□□ -0.41
CDHR1-206ENST00000623527 GJC1P36383 396 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 CCDC102BQ68D86 513 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 TMX3Q96JJ7 454 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 NCOA1Q15788 1441 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 FAM83GA6ND36 823 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 PDIA4P13667 645 aaKnown RBP12.46□□□□□ -0.41
CDHR1-206ENST00000623527 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 PPP4R3AQ6IN85 833 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 MICALL1Q8N3F8 863 aa12.46□□□□□ -0.41
CDHR1-206ENST00000623527 DDX46Q7L014 1031 aaKnown RBP12.46□□□□□ -0.42
CDHR1-206ENST00000623527 NUDT16Q96DE0 195 aaKnown RBP12.46□□□□□ -0.42
CDHR1-206ENST00000623527 CALML4Q96GE6 196 aa12.46□□□□□ -0.42
CDHR1-206ENST00000623527 ARFGAP3Q9NP61 516 aa12.46□□□□□ -0.42
CDHR1-206ENST00000623527 HMGB1P09429 215 aaKnown RBP12.46□□□□□ -0.42
CDHR1-206ENST00000623527 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.42
CDHR1-206ENST00000623527 KIAA0753Q2KHM9 967 aa12.46□□□□□ -0.42
CDHR1-206ENST00000623527 KLHL40Q2TBA0 621 aa12.46□□□□□ -0.42
CDHR1-206ENST00000623527 AOPEPQ8N6M6 819 aa12.46□□□□□ -0.42
CDHR1-206ENST00000623527 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.42
CDHR1-206ENST00000623527 TIAM1Q13009 1591 aa12.46□□□□□ -0.42
CDHR1-206ENST00000623527 NEK1Q96PY6 1258 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 ARL1P40616 181 aaPredicted RBP12.45□□□□□ -0.42
CDHR1-206ENST00000623527 SYKP43405 635 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 LRSAM1Q6UWE0 723 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 USP48Q86UV5 1035 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
CDHR1-206ENST00000623527 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
CDHR1-206ENST00000623527 RRAGBQ5VZM2 374 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 GIGYF2Q6Y7W6 1299 aaKnown RBP12.45□□□□□ -0.42
CDHR1-206ENST00000623527 ZNF287Q9HBT7 754 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 HSPA4P34932 840 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
CDHR1-206ENST00000623527 FERMT2Q96AC1 680 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 ZEB2O60315 1214 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 FBLN1P23142 703 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 DACT1Q9NYF0 836 aa12.45□□□□□ -0.42
CDHR1-206ENST00000623527 IQSEC3Q9UPP2 1182 aaPredicted RBP12.45□□□□□ -0.42
CDHR1-206ENST00000623527 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 CAPN2P17655 700 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 CUL5Q93034 780 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 PAXBP1Q9Y5B6 917 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 IKBKGQ9Y6K9 419 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 CCDC150Q8NCX0 1101 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 TBC1D32Q96NH3 1257 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 MAP3K2Q9Y2U5 619 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 DNM1Q05193 864 aaKnown RBP12.44□□□□□ -0.42
CDHR1-206ENST00000623527 FAM160A1Q05DH4 1040 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 FLIIQ13045 1269 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 PPM1EQ8WY54 764 aa12.44□□□□□ -0.42
CDHR1-206ENST00000623527 TMEM110-MUSTN1A8MSY1 372 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
CDHR1-206ENST00000623527 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
CDHR1-206ENST00000623527 PPP1R42Q7Z4L9 355 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 CTAGE15A4D2H0 777 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 RHOXF2BP0C7M4 288 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 CTAGE8P0CG41 777 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 CETN1Q12798 172 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 CTAGE6Q86UF2 777 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 CTAGE4Q8IX94 777 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 PRIMPOLQ96LW4 560 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 SPAG5Q96R06 1193 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 RHOXF2Q9BQY4 288 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 KLF18A0A0U1RQI7 1052 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 UBE3BQ7Z3V4 1068 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 EVI5LQ96CN4 794 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 LZTFL1Q9NQ48 299 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 FGD5Q6ZNL6 1462 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 VPS18Q9P253 973 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 ZSCAN22P10073 491 aaPredicted RBP12.43□□□□□ -0.42
CDHR1-206ENST00000623527 STX17P56962 302 aa12.43□□□□□ -0.42
CDHR1-206ENST00000623527 SELENOSQ9BQE4 189 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms