RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 KRT24Q2M2I5 525 aa16.92■□□□□ 0.3
ATRX-208ENST00000622960 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
ATRX-208ENST00000622960 SUSD4Q5VX71 490 aa16.92■□□□□ 0.3
ATRX-208ENST00000622960 DUSP27Q5VZP5 1158 aa16.92■□□□□ 0.3
ATRX-208ENST00000622960 RTKN2Q8IZC4 609 aa16.92■□□□□ 0.3
ATRX-208ENST00000622960 RBM17Q96I25 401 aaKnown RBP16.92■□□□□ 0.3
ATRX-208ENST00000622960 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
ATRX-208ENST00000622960 NTSR2O95665 410 aa16.91■□□□□ 0.3
ATRX-208ENST00000622960 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
ATRX-208ENST00000622960 FKBP4Q02790 459 aaKnown RBP eCLIP16.9■□□□□ 0.3
ATRX-208ENST00000622960 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
ATRX-208ENST00000622960 CC2D2BQ6DHV5 1058 aa16.9■□□□□ 0.3
ATRX-208ENST00000622960 LRP10Q7Z4F1 713 aa16.9■□□□□ 0.3
ATRX-208ENST00000622960 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
ATRX-208ENST00000622960 RRAGCQ9HB90 399 aa16.9■□□□□ 0.3
ATRX-208ENST00000622960 DICER1Q9UPY3 1922 aaKnown RBP16.9■□□□□ 0.3
ATRX-208ENST00000622960 VEGFAP15692 232 aaPredicted RBP16.89■□□□□ 0.29
ATRX-208ENST00000622960 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
ATRX-208ENST00000622960 GRIPAP1Q4V328 841 aa16.89■□□□□ 0.29
ATRX-208ENST00000622960 TRMT112Q9UI30 125 aaKnown RBP16.89■□□□□ 0.29
ATRX-208ENST00000622960 ZNF853P0CG23 659 aa16.88■□□□□ 0.29
ATRX-208ENST00000622960 FSTL1Q12841 308 aa16.88■□□□□ 0.29
ATRX-208ENST00000622960 TCIRG1Q13488 830 aa16.88■□□□□ 0.29
ATRX-208ENST00000622960 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
ATRX-208ENST00000622960 PLBD2Q8NHP8 589 aa16.88■□□□□ 0.29
ATRX-208ENST00000622960 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
ATRX-208ENST00000622960 PPEF1O14829 653 aaPredicted RBP16.87■□□□□ 0.29
ATRX-208ENST00000622960 SMC1BQ8NDV3 1235 aa16.87■□□□□ 0.29
ATRX-208ENST00000622960 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
ATRX-208ENST00000622960 HOXA10P31260 410 aaPredicted RBP16.86■□□□□ 0.29
ATRX-208ENST00000622960 APLP1P51693 650 aa16.86■□□□□ 0.29
ATRX-208ENST00000622960 PRELPP51888 382 aa16.86■□□□□ 0.29
ATRX-208ENST00000622960 CCDC27Q2M243 656 aa16.86■□□□□ 0.29
ATRX-208ENST00000622960 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
ATRX-208ENST00000622960 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
ATRX-208ENST00000622960 C7orf43Q8WVR3 580 aa16.86■□□□□ 0.29
ATRX-208ENST00000622960 CRAMP1Q96RY5 1269 aa16.86■□□□□ 0.29
ATRX-208ENST00000622960 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
ATRX-208ENST00000622960 RIC3Q7Z5B4 369 aa16.85■□□□□ 0.29
ATRX-208ENST00000622960 JDP2Q8WYK2 163 aa16.85■□□□□ 0.29
ATRX-208ENST00000622960 STK31Q9BXU1 1019 aa16.85■□□□□ 0.29
ATRX-208ENST00000622960 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
ATRX-208ENST00000622960 IQCA1LA6NCM1 817 aa16.84■□□□□ 0.29
ATRX-208ENST00000622960 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
ATRX-208ENST00000622960 IARSP41252 1262 aaKnown RBP16.84■□□□□ 0.29
ATRX-208ENST00000622960 CCDC184Q52MB2 194 aa16.84■□□□□ 0.29
ATRX-208ENST00000622960 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
ATRX-208ENST00000622960 PSMD1Q99460 953 aa16.84■□□□□ 0.29
ATRX-208ENST00000622960 ZNF277Q9NRM2 450 aaPredicted RBP16.84■□□□□ 0.29
ATRX-208ENST00000622960 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.28
ATRX-208ENST00000622960 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
ATRX-208ENST00000622960 SLC10A5Q5PT55 438 aa16.83■□□□□ 0.28
ATRX-208ENST00000622960 SYNE4Q8N205 404 aa16.83■□□□□ 0.28
ATRX-208ENST00000622960 IL16Q14005 1332 aa16.82■□□□□ 0.28
ATRX-208ENST00000622960 WWC1Q8IX03 1113 aa16.82■□□□□ 0.28
ATRX-208ENST00000622960 ABCC4O15439 1325 aa16.81■□□□□ 0.28
ATRX-208ENST00000622960 HCLS1P14317 486 aaPredicted RBP16.81■□□□□ 0.28
ATRX-208ENST00000622960 IFFO2Q5TF58 517 aa16.81■□□□□ 0.28
ATRX-208ENST00000622960 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
ATRX-208ENST00000622960 SUPT20HQ8NEM7 779 aa16.81■□□□□ 0.28
ATRX-208ENST00000622960 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
ATRX-208ENST00000622960 LAMB2P55268 1798 aa16.8■□□□□ 0.28
ATRX-208ENST00000622960 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
ATRX-208ENST00000622960 BBOX1O75936 387 aa16.8■□□□□ 0.28
ATRX-208ENST00000622960 EIF6P56537 245 aaKnown RBP16.8■□□□□ 0.28
ATRX-208ENST00000622960 TMC4Q7Z404 712 aa16.8■□□□□ 0.28
ATRX-208ENST00000622960 LARGE2Q8N3Y3 721 aa16.8■□□□□ 0.28
ATRX-208ENST00000622960 C8orf58Q8NAV2 365 aa16.8■□□□□ 0.28
ATRX-208ENST00000622960 TSR2Q969E8 191 aaKnown RBP16.8■□□□□ 0.28
ATRX-208ENST00000622960 DDNO94850 711 aaPredicted RBP16.79■□□□□ 0.28
ATRX-208ENST00000622960 TWISTNBQ3B726 338 aaPredicted RBP16.79■□□□□ 0.28
ATRX-208ENST00000622960 C3orf67Q6ZVT6 689 aa16.79■□□□□ 0.28
ATRX-208ENST00000622960 FAM9BQ8IZU0 186 aa16.79■□□□□ 0.28
ATRX-208ENST00000622960 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
ATRX-208ENST00000622960 ATP6V0A2Q9Y487 856 aa16.79■□□□□ 0.28
ATRX-208ENST00000622960 NEXNQ0ZGT2 675 aa16.78■□□□□ 0.28
ATRX-208ENST00000622960 GRAPQ13588 217 aa16.78■□□□□ 0.28
ATRX-208ENST00000622960 DPP8Q6V1X1 898 aaPredicted RBP16.78■□□□□ 0.28
ATRX-208ENST00000622960 NIM1KQ8IY84 436 aa16.78■□□□□ 0.28
ATRX-208ENST00000622960 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
ATRX-208ENST00000622960 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
ATRX-208ENST00000622960 MYD88Q99836 296 aa16.78■□□□□ 0.28
ATRX-208ENST00000622960 PHAXQ9H814 394 aaKnown RBP16.78■□□□□ 0.28
ATRX-208ENST00000622960 SCN4AP35499 1836 aa16.77■□□□□ 0.28
ATRX-208ENST00000622960 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.28
ATRX-208ENST00000622960 PPIP5K2O43314 1243 aa16.77■□□□□ 0.28
ATRX-208ENST00000622960 TRIM28Q13263 835 aaKnown RBP16.77■□□□□ 0.28
ATRX-208ENST00000622960 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.28
ATRX-208ENST00000622960 WDR63Q8IWG1 891 aa16.77■□□□□ 0.28
ATRX-208ENST00000622960 L3MBTL3Q96JM7 780 aaPredicted RBP16.77■□□□□ 0.28
ATRX-208ENST00000622960 VPS33BQ9H267 617 aa16.77■□□□□ 0.28
ATRX-208ENST00000622960 SALL2Q9Y467 1007 aaPredicted RBP16.77■□□□□ 0.28
ATRX-208ENST00000622960 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
ATRX-208ENST00000622960 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
ATRX-208ENST00000622960 LMOD1P29536 600 aaPredicted RBP16.76■□□□□ 0.27
ATRX-208ENST00000622960 SP8Q8IXZ3 490 aa16.76■□□□□ 0.27
ATRX-208ENST00000622960 GPC2Q8N158 579 aa16.76■□□□□ 0.27
ATRX-208ENST00000622960 ZBTB38Q8NAP3 1195 aaPredicted RBP16.76■□□□□ 0.27
ATRX-208ENST00000622960 CCDC191Q8NCU4 936 aa16.76■□□□□ 0.27
ATRX-208ENST00000622960 ZNF428Q96B54 188 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms