RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 NPR1P16066 1061 aa17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 TRMT112Q9UI30 125 aaKnown RBP17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 COL11A2P13942 1736 aaPredicted RBP17.92■□□□□ 0.46
PCDHGC3-208ENST00000622836 ANKRD36CQ5JPF3 1778 aa17.91■□□□□ 0.46
PCDHGC3-208ENST00000622836 ARFGEF1Q9Y6D6 1849 aa17.91■□□□□ 0.46
PCDHGC3-208ENST00000622836 RPGRQ92834 1020 aaKnown RBP17.91■□□□□ 0.46
PCDHGC3-208ENST00000622836 RNF123Q5XPI4 1314 aa17.91■□□□□ 0.46
PCDHGC3-208ENST00000622836 MYD88Q99836 296 aa17.9■□□□□ 0.46
PCDHGC3-208ENST00000622836 SH3TC1Q8TE82 1336 aa17.9■□□□□ 0.46
PCDHGC3-208ENST00000622836 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
PCDHGC3-208ENST00000622836 KLRG2A4D1S0 409 aaPredicted RBP17.89■□□□□ 0.45
PCDHGC3-208ENST00000622836 C21orf2O43822 256 aa17.89■□□□□ 0.45
PCDHGC3-208ENST00000622836 PRPF40BQ6NWY9 871 aaKnown RBP17.89■□□□□ 0.45
PCDHGC3-208ENST00000622836 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
PCDHGC3-208ENST00000622836 ISCA1Q9BUE6 129 aa17.89■□□□□ 0.45
PCDHGC3-208ENST00000622836 MAP3K2Q9Y2U5 619 aa17.89■□□□□ 0.45
PCDHGC3-208ENST00000622836 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
PCDHGC3-208ENST00000622836 ALDH1B1P30837 517 aa17.88■□□□□ 0.45
PCDHGC3-208ENST00000622836 NEXNQ0ZGT2 675 aa17.88■□□□□ 0.45
PCDHGC3-208ENST00000622836 FKBP5Q13451 457 aaPredicted RBP17.88■□□□□ 0.45
PCDHGC3-208ENST00000622836 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
PCDHGC3-208ENST00000622836 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
PCDHGC3-208ENST00000622836 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
PCDHGC3-208ENST00000622836 SLFN5Q08AF3 891 aa17.87■□□□□ 0.45
PCDHGC3-208ENST00000622836 FLIIQ13045 1269 aa17.87■□□□□ 0.45
PCDHGC3-208ENST00000622836 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-208ENST00000622836 G2E3Q7L622 706 aa17.87■□□□□ 0.45
PCDHGC3-208ENST00000622836 METTL22Q9BUU2 404 aaPredicted RBP17.87■□□□□ 0.45
PCDHGC3-208ENST00000622836 RIC1Q4ADV7 1423 aa17.87■□□□□ 0.45
PCDHGC3-208ENST00000622836 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
PCDHGC3-208ENST00000622836 CRY2Q49AN0 593 aa17.86■□□□□ 0.45
PCDHGC3-208ENST00000622836 SOGA3Q5TF21 947 aa17.86■□□□□ 0.45
PCDHGC3-208ENST00000622836 FAM89AQ96GI7 184 aa17.86■□□□□ 0.45
PCDHGC3-208ENST00000622836 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
PCDHGC3-208ENST00000622836 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
PCDHGC3-208ENST00000622836 RASSF7Q02833 373 aa17.85■□□□□ 0.45
PCDHGC3-208ENST00000622836 TRIM28Q13263 835 aaKnown RBP17.85■□□□□ 0.45
PCDHGC3-208ENST00000622836 SLC10A5Q5PT55 438 aa17.85■□□□□ 0.45
PCDHGC3-208ENST00000622836 C9orf131Q5VYM1 1079 aa17.85■□□□□ 0.45
PCDHGC3-208ENST00000622836 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
PCDHGC3-208ENST00000622836 ZNF784Q8NCA9 323 aaPredicted RBP17.85■□□□□ 0.45
PCDHGC3-208ENST00000622836 RBM17Q96I25 401 aaKnown RBP17.85■□□□□ 0.45
PCDHGC3-208ENST00000622836 ADCY9O60503 1353 aa17.84■□□□□ 0.45
PCDHGC3-208ENST00000622836 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
PCDHGC3-208ENST00000622836 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
PCDHGC3-208ENST00000622836 CCDC191Q8NCU4 936 aa17.84■□□□□ 0.45
PCDHGC3-208ENST00000622836 CWC25Q9NXE8 425 aaPredicted RBP17.84■□□□□ 0.45
PCDHGC3-208ENST00000622836 RNF181Q9P0P0 153 aa17.84■□□□□ 0.45
PCDHGC3-208ENST00000622836 SLX4Q8IY92 1834 aa17.84■□□□□ 0.45
PCDHGC3-208ENST00000622836 CCDC93Q567U6 631 aa17.83■□□□□ 0.44
PCDHGC3-208ENST00000622836 ZBTB38Q8NAP3 1195 aaPredicted RBP17.83■□□□□ 0.44
PCDHGC3-208ENST00000622836 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
PCDHGC3-208ENST00000622836 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
PCDHGC3-208ENST00000622836 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
PCDHGC3-208ENST00000622836 HOXA10P31260 410 aaPredicted RBP17.82■□□□□ 0.44
PCDHGC3-208ENST00000622836 ZNF526Q8TF50 670 aaPredicted RBP17.82■□□□□ 0.44
PCDHGC3-208ENST00000622836 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
PCDHGC3-208ENST00000622836 TAOK3Q9H2K8 898 aa17.82■□□□□ 0.44
PCDHGC3-208ENST00000622836 LMNB1P20700 586 aa17.81■□□□□ 0.44
PCDHGC3-208ENST00000622836 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
PCDHGC3-208ENST00000622836 DNAAF4Q8WXU2 420 aa17.81■□□□□ 0.44
PCDHGC3-208ENST00000622836 CRAMP1Q96RY5 1269 aa17.81■□□□□ 0.44
PCDHGC3-208ENST00000622836 NFKBIEO00221 500 aa17.8■□□□□ 0.44
PCDHGC3-208ENST00000622836 PPEF1O14829 653 aaPredicted RBP17.8■□□□□ 0.44
PCDHGC3-208ENST00000622836 PCCAP05165 728 aaPredicted RBP17.8■□□□□ 0.44
PCDHGC3-208ENST00000622836 CWF19L2Q2TBE0 894 aaKnown RBP17.8■□□□□ 0.44
PCDHGC3-208ENST00000622836 NEURL1BA8MQ27 555 aa17.79■□□□□ 0.44
PCDHGC3-208ENST00000622836 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
PCDHGC3-208ENST00000622836 OLFM4Q6UX06 510 aa17.79■□□□□ 0.44
PCDHGC3-208ENST00000622836 RTKN2Q8IZC4 609 aa17.79■□□□□ 0.44
PCDHGC3-208ENST00000622836 C7orf43Q8WVR3 580 aa17.79■□□□□ 0.44
PCDHGC3-208ENST00000622836 JARID2Q92833 1246 aaPredicted RBP17.79■□□□□ 0.44
PCDHGC3-208ENST00000622836 GPBP1L1Q9HC44 474 aaPredicted RBP17.79■□□□□ 0.44
PCDHGC3-208ENST00000622836 ABCC4O15439 1325 aa17.78■□□□□ 0.44
PCDHGC3-208ENST00000622836 F6X3S4 739 aa17.78■□□□□ 0.44
PCDHGC3-208ENST00000622836 CC2D2BQ6DHV5 1058 aa17.77■□□□□ 0.44
PCDHGC3-208ENST00000622836 TRMT2AQ8IZ69 625 aaKnown RBP17.77■□□□□ 0.44
PCDHGC3-208ENST00000622836 LINS1Q8NG48 757 aa17.77■□□□□ 0.44
PCDHGC3-208ENST00000622836 BCL2L13Q9BXK5 485 aa17.77■□□□□ 0.44
PCDHGC3-208ENST00000622836 LAMB2P55268 1798 aa17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 LTBP3Q9NS15 1303 aa17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 DDX60Q8IY21 1712 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 FKBP4Q02790 459 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 GRAPQ13588 217 aa17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 SSH1Q8WYL5 1049 aa17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 SMC4Q9NTJ3 1288 aa17.76■□□□□ 0.43
PCDHGC3-208ENST00000622836 SBF1O95248 1867 aa17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 PDE8AO60658 829 aa17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 BBOX1O75936 387 aa17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 CT47B1P0C2W7 299 aaPredicted RBP17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 GCKRQ14397 625 aa17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 UBE3BQ7Z3V4 1068 aa17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 MRPL50Q8N5N7 158 aaKnown RBP17.75■□□□□ 0.43
PCDHGC3-208ENST00000622836 CDHR2Q9BYE9 1310 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms