RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 SUSD4Q5VX71 490 aa15.85■□□□□ 0.13
CBWD3-218ENST00000622755 PRPF40BQ6NWY9 871 aaKnown RBP15.85■□□□□ 0.13
CBWD3-218ENST00000622755 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
CBWD3-218ENST00000622755 TSR2Q969E8 191 aaKnown RBP15.85■□□□□ 0.13
CBWD3-218ENST00000622755 UBN2Q6ZU65 1347 aa15.85■□□□□ 0.13
CBWD3-218ENST00000622755 C8orf58Q8NAV2 365 aa15.85■□□□□ 0.13
CBWD3-218ENST00000622755 RBM17Q96I25 401 aaKnown RBP15.85■□□□□ 0.13
CBWD3-218ENST00000622755 TRMT112Q9UI30 125 aaKnown RBP15.85■□□□□ 0.13
CBWD3-218ENST00000622755 RIC1Q4ADV7 1423 aa15.84■□□□□ 0.13
CBWD3-218ENST00000622755 KDM2BQ8NHM5 1336 aa15.84■□□□□ 0.13
CBWD3-218ENST00000622755 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
CBWD3-218ENST00000622755 ADCY9O60503 1353 aa15.84■□□□□ 0.13
CBWD3-218ENST00000622755 NTSR2O95665 410 aa15.84■□□□□ 0.13
CBWD3-218ENST00000622755 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
CBWD3-218ENST00000622755 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.13
CBWD3-218ENST00000622755 KLRG2A4D1S0 409 aaPredicted RBP15.83■□□□□ 0.12
CBWD3-218ENST00000622755 CCER2I3L3R5 266 aa15.83■□□□□ 0.12
CBWD3-218ENST00000622755 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
CBWD3-218ENST00000622755 GOLGB1Q14789 3259 aaKnown RBP15.82■□□□□ 0.12
CBWD3-218ENST00000622755 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
CBWD3-218ENST00000622755 GRIPAP1Q4V328 841 aa15.82■□□□□ 0.12
CBWD3-218ENST00000622755 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
CBWD3-218ENST00000622755 RTKN2Q8IZC4 609 aa15.82■□□□□ 0.12
CBWD3-218ENST00000622755 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
CBWD3-218ENST00000622755 RASSF7Q02833 373 aa15.81■□□□□ 0.12
CBWD3-218ENST00000622755 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
CBWD3-218ENST00000622755 C16orf71Q8IYS4 520 aaPredicted RBP15.81■□□□□ 0.12
CBWD3-218ENST00000622755 UTRNP46939 3433 aa15.81■□□□□ 0.12
CBWD3-218ENST00000622755 FANCIQ9NVI1 1328 aa15.81■□□□□ 0.12
CBWD3-218ENST00000622755 SBF1O95248 1867 aa15.81■□□□□ 0.12
CBWD3-218ENST00000622755 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
CBWD3-218ENST00000622755 CRY2Q49AN0 593 aa15.8■□□□□ 0.12
CBWD3-218ENST00000622755 DPY19L2Q6NUT2 758 aa15.8■□□□□ 0.12
CBWD3-218ENST00000622755 LTBP3Q9NS15 1303 aa15.8■□□□□ 0.12
CBWD3-218ENST00000622755 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
CBWD3-218ENST00000622755 DDX46Q7L014 1031 aaKnown RBP15.79■□□□□ 0.12
CBWD3-218ENST00000622755 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
CBWD3-218ENST00000622755 CRAMP1Q96RY5 1269 aa15.79■□□□□ 0.12
CBWD3-218ENST00000622755 PHAXQ9H814 394 aaKnown RBP15.79■□□□□ 0.12
CBWD3-218ENST00000622755 FER1L6Q2WGJ9 1857 aa15.79■□□□□ 0.12
CBWD3-218ENST00000622755 CCDC88AQ3V6T2 1871 aa15.79■□□□□ 0.12
CBWD3-218ENST00000622755 TNRC6CQ9HCJ0 1690 aaKnown RBP15.79■□□□□ 0.12
CBWD3-218ENST00000622755 CACNA1FO60840 1977 aa15.79■□□□□ 0.12
CBWD3-218ENST00000622755 ATP5J2-PTCD1G3V325 749 aa15.78■□□□□ 0.12
CBWD3-218ENST00000622755 NFKBIEO00221 500 aa15.77■□□□□ 0.12
CBWD3-218ENST00000622755 SLC4A2P04920 1241 aa15.77■□□□□ 0.12
CBWD3-218ENST00000622755 HOXA10P31260 410 aaPredicted RBP15.77■□□□□ 0.12
CBWD3-218ENST00000622755 TRIM28Q13263 835 aaKnown RBP15.77■□□□□ 0.12
CBWD3-218ENST00000622755 CCDC191Q8NCU4 936 aa15.77■□□□□ 0.12
CBWD3-218ENST00000622755 MYD88Q99836 296 aa15.77■□□□□ 0.12
CBWD3-218ENST00000622755 ISCA1Q9BUE6 129 aa15.77■□□□□ 0.12
CBWD3-218ENST00000622755 TIAM2Q8IVF5 1701 aa15.77■□□□□ 0.11
CBWD3-218ENST00000622755 PPEF1O14829 653 aaPredicted RBP15.77■□□□□ 0.11
CBWD3-218ENST00000622755 C1QTNF8P60827 252 aa15.77■□□□□ 0.11
CBWD3-218ENST00000622755 FKBP4Q02790 459 aaKnown RBP eCLIP15.77■□□□□ 0.11
CBWD3-218ENST00000622755 EXOSC9Q06265 439 aaKnown RBP15.77■□□□□ 0.11
CBWD3-218ENST00000622755 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.11
CBWD3-218ENST00000622755 KSR2Q6VAB6 950 aa15.77■□□□□ 0.11
CBWD3-218ENST00000622755 CWC25Q9NXE8 425 aaPredicted RBP15.77■□□□□ 0.11
CBWD3-218ENST00000622755 HCLS1P14317 486 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-218ENST00000622755 FKBP5Q13451 457 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-218ENST00000622755 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-218ENST00000622755 MAP3K2Q9Y2U5 619 aa15.76■□□□□ 0.11
CBWD3-218ENST00000622755 DICER1Q9UPY3 1922 aaKnown RBP15.75■□□□□ 0.11
CBWD3-218ENST00000622755 E9PSI1 815 aa15.75■□□□□ 0.11
CBWD3-218ENST00000622755 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
CBWD3-218ENST00000622755 BBOX1O75936 387 aa15.75■□□□□ 0.11
CBWD3-218ENST00000622755 TMC4Q7Z404 712 aa15.75■□□□□ 0.11
CBWD3-218ENST00000622755 ZBTB38Q8NAP3 1195 aaPredicted RBP15.75■□□□□ 0.11
CBWD3-218ENST00000622755 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
CBWD3-218ENST00000622755 PI4KAP2A4QPH2 592 aa15.74■□□□□ 0.11
CBWD3-218ENST00000622755 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
CBWD3-218ENST00000622755 PI4KAP1Q8N8J0 262 aa15.74■□□□□ 0.11
CBWD3-218ENST00000622755 SUPT20HQ8NEM7 779 aa15.74■□□□□ 0.11
CBWD3-218ENST00000622755 JDP2Q8WYK2 163 aa15.74■□□□□ 0.11
CBWD3-218ENST00000622755 GLTPD2A6NH11 291 aa15.73■□□□□ 0.11
CBWD3-218ENST00000622755 VAMP4O75379 141 aa15.73■□□□□ 0.11
CBWD3-218ENST00000622755 FLIIQ13045 1269 aa15.73■□□□□ 0.11
CBWD3-218ENST00000622755 RTL5Q5HYW3 569 aaPredicted RBP15.73■□□□□ 0.11
CBWD3-218ENST00000622755 C7orf43Q8WVR3 580 aa15.73■□□□□ 0.11
CBWD3-218ENST00000622755 LAMB2P55268 1798 aa15.73■□□□□ 0.11
CBWD3-218ENST00000622755 ABCC4O15439 1325 aa15.72■□□□□ 0.11
CBWD3-218ENST00000622755 PCCAP05165 728 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-218ENST00000622755 GRAPQ13588 217 aa15.72■□□□□ 0.11
CBWD3-218ENST00000622755 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-218ENST00000622755 PSMD1Q99460 953 aa15.72■□□□□ 0.11
CBWD3-218ENST00000622755 TOMM70O94826 608 aa15.71■□□□□ 0.11
CBWD3-218ENST00000622755 IARSP41252 1262 aaKnown RBP15.71■□□□□ 0.11
CBWD3-218ENST00000622755 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
CBWD3-218ENST00000622755 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
CBWD3-218ENST00000622755 ZNF428Q96B54 188 aa15.71■□□□□ 0.11
CBWD3-218ENST00000622755 ATP6V0A2Q9Y487 856 aa15.71■□□□□ 0.11
CBWD3-218ENST00000622755 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.1
CBWD3-218ENST00000622755 PDE8AO60658 829 aa15.7■□□□□ 0.1
CBWD3-218ENST00000622755 VEGFAP15692 232 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-218ENST00000622755 SF3B3Q15393 1217 aaKnown RBP15.7■□□□□ 0.1
CBWD3-218ENST00000622755 DNAAF4Q8WXU2 420 aa15.7■□□□□ 0.1
CBWD3-218ENST00000622755 NMRK2Q9NPI5 230 aa15.7■□□□□ 0.1
CBWD3-218ENST00000622755 ZNF277Q9NRM2 450 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-218ENST00000622755 EIF6P56537 245 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms