RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 HSPA6P17066 643 aa13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
PCDHGC3-207ENST00000622656 COL4A5P29400 1685 aa13.24□□□□□ -0.29
PCDHGC3-207ENST00000622656 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
PCDHGC3-207ENST00000622656 TOMM70O94826 608 aa13.24□□□□□ -0.29
PCDHGC3-207ENST00000622656 C8orf58Q8NAV2 365 aa13.24□□□□□ -0.29
PCDHGC3-207ENST00000622656 COL4A1P02462 1669 aa13.24□□□□□ -0.29
PCDHGC3-207ENST00000622656 ZC3H4Q9UPT8 1303 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 TCIRG1Q13488 830 aa13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 NLRP10Q86W26 655 aa13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 TSPYL6Q8N831 410 aa13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 ZNF277Q9NRM2 450 aaPredicted RBP13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
PCDHGC3-207ENST00000622656 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 DDNO94850 711 aaPredicted RBP13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 HOXB7P09629 217 aa13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 HCLS1P14317 486 aaPredicted RBP13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 PPP1R42Q7Z4L9 355 aa13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 TSR2Q969E8 191 aaKnown RBP13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 UTP14AQ9BVJ6 771 aaKnown RBP13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 MRS2Q9HD23 443 aa13.22□□□□□ -0.29
PCDHGC3-207ENST00000622656 ATP5J2-PTCD1G3V325 749 aa13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 GNAI1P63096 354 aa13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 HTRA3P83110 453 aa13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 FKBP4Q02790 459 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 SLC10A5Q5PT55 438 aa13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 DBF4Q9UBU7 674 aaPredicted RBP13.21□□□□□ -0.29
PCDHGC3-207ENST00000622656 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 ANP32CO43423 234 aa13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 SOGA3Q5TF21 947 aa13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 WWC1Q8IX03 1113 aa13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 PLBD2Q8NHP8 589 aa13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 ISCA1Q9BUE6 129 aa13.2□□□□□ -0.3
PCDHGC3-207ENST00000622656 POTEIP0CG38 1075 aa13.19□□□□□ -0.3
PCDHGC3-207ENST00000622656 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
PCDHGC3-207ENST00000622656 C16orf71Q8IYS4 520 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC3-207ENST00000622656 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
PCDHGC3-207ENST00000622656 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
PCDHGC3-207ENST00000622656 SALL2Q9Y467 1007 aaPredicted RBP13.19□□□□□ -0.3
PCDHGC3-207ENST00000622656 ABCC4O15439 1325 aa13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 PPEF1O14829 653 aaPredicted RBP13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 VEGFAP15692 232 aaPredicted RBP13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 HSP90AB3PQ58FF7 597 aa13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 FAM89AQ96GI7 184 aa13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 NLRP3Q96P20 1036 aa13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 HYPKQ9NX55 129 aa13.18□□□□□ -0.3
PCDHGC3-207ENST00000622656 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
PCDHGC3-207ENST00000622656 CCDC27Q2M243 656 aa13.17□□□□□ -0.3
PCDHGC3-207ENST00000622656 RTKN2Q8IZC4 609 aa13.17□□□□□ -0.3
PCDHGC3-207ENST00000622656 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
PCDHGC3-207ENST00000622656 SCN4AP35499 1836 aa13.17□□□□□ -0.3
PCDHGC3-207ENST00000622656 LTBP1Q14766 1721 aa13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 SH3TC1Q8TE82 1336 aa13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 CALD1Q05682 793 aaKnown RBP13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 DNAJC5GQ8N7S2 189 aa13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 PSMD1Q99460 953 aa13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 LRRC37AA6NMS7 1700 aa13.16□□□□□ -0.3
PCDHGC3-207ENST00000622656 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
PCDHGC3-207ENST00000622656 FSTL1Q12841 308 aa13.15□□□□□ -0.3
PCDHGC3-207ENST00000622656 G2E3Q7L622 706 aa13.15□□□□□ -0.3
PCDHGC3-207ENST00000622656 MYD88Q99836 296 aa13.15□□□□□ -0.3
PCDHGC3-207ENST00000622656 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
PCDHGC3-207ENST00000622656 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
PCDHGC3-207ENST00000622656 FZD9O00144 591 aa13.14□□□□□ -0.31
PCDHGC3-207ENST00000622656 APLP1P51693 650 aa13.14□□□□□ -0.31
PCDHGC3-207ENST00000622656 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
PCDHGC3-207ENST00000622656 FAM9BQ8IZU0 186 aa13.14□□□□□ -0.31
PCDHGC3-207ENST00000622656 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
PCDHGC3-207ENST00000622656 ADAMTSL1Q8N6G6 1762 aa13.14□□□□□ -0.31
PCDHGC3-207ENST00000622656 CACNA1FO60840 1977 aa13.13□□□□□ -0.31
PCDHGC3-207ENST00000622656 TRIM28Q13263 835 aaKnown RBP13.13□□□□□ -0.31
PCDHGC3-207ENST00000622656 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
PCDHGC3-207ENST00000622656 CC2D2BQ6DHV5 1058 aa13.13□□□□□ -0.31
PCDHGC3-207ENST00000622656 SMC1BQ8NDV3 1235 aa13.13□□□□□ -0.31
PCDHGC3-207ENST00000622656 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
PCDHGC3-207ENST00000622656 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
PCDHGC3-207ENST00000622656 PCNTO95613 3336 aa13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 MYH3P11055 1940 aa13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 SPEF2Q9C093 1822 aa13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 GRAPQ13588 217 aa13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 AOC3Q16853 763 aa13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 TWISTNBQ3B726 338 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 GRAPLQ8TC17 118 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 CELF1Q92879 486 aaKnown RBP13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 TAF1DQ9H5J8 278 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC3-207ENST00000622656 IL16Q14005 1332 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms