RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ELF2Q15723 593 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 AK7Q96M32 723 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 CEP89Q96ST8 783 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 TOMM22Q9NS69 142 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 ZNF215Q9UL58 517 aaPredicted RBP8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 SUFUQ9UMX1 484 aa8.85□□□□□ -0.99
TRIM49B-202ENST00000622138 ELP1O95163 1332 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 ERBB3P21860 1342 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 USP31Q70CQ4 1352 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 TCHHQ07283 1943 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 KIF2AO00139 706 aaPredicted RBP8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 GOLIM4O00461 696 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 KIF3CO14782 793 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 CPP00450 1065 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 MTHFSDQ2M296 383 aaKnown RBP8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 GTF3C6Q969F1 213 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 FUCA2Q9BTY2 467 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 LCMT1Q9UIC8 334 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 FAM208AQ9UK61 1670 aaKnown RBP8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 TMEM2Q9UHN6 1383 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 SSH2Q76I76 1423 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 PTPRUQ92729 1446 aa8.84□□□□□ -0.99
TRIM49B-202ENST00000622138 CCDC196A0A1B0GTZ2 297 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 SLC4A10Q6U841 1118 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 PPM1EQ8WY54 764 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 RTF1Q92541 710 aaKnown RBP8.83□□□□□ -1
TRIM49B-202ENST00000622138 UBXN6Q9BZV1 441 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 ARGLU1Q9NWB6 273 aaPredicted RBP8.83□□□□□ -1
TRIM49B-202ENST00000622138 ARHGEF10O15013 1369 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 TNRQ92752 1358 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 LRRC37A3O60309 1634 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 PTGS1P23219 599 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 MCM2P49736 904 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 TPD52L1Q16890 204 aaPredicted RBP8.83□□□□□ -1
TRIM49B-202ENST00000622138 C14orf37Q86TY3 774 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 PACS2Q86VP3 889 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 PLCD4Q9BRC7 762 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 TACO1Q9BSH4 297 aaKnown RBP8.83□□□□□ -1
TRIM49B-202ENST00000622138 EXOC6BQ9Y2D4 811 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 SALL3Q9BXA9 1300 aa8.83□□□□□ -1
TRIM49B-202ENST00000622138 XRN1Q8IZH2 1706 aaKnown RBP8.83□□□□□ -1
TRIM49B-202ENST00000622138 CCDC189A1A4V9 331 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 PLEKHG3A1L390 1219 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 PPP1R12AO14974 1030 aaPredicted RBP8.82□□□□□ -1
TRIM49B-202ENST00000622138 ZRANB2O95218 330 aaKnown RBP eCLIP8.82□□□□□ -1
TRIM49B-202ENST00000622138 PDE1AP54750 535 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 MMS22LQ6ZRQ5 1243 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 SMARCE1Q969G3 411 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 EXOC4Q96A65 974 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 BSDC1Q9NW68 430 aaPredicted RBP8.82□□□□□ -1
TRIM49B-202ENST00000622138 TSPYL4Q9UJ04 414 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 ERC2O15083 957 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 NEMFO60524 1076 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 LTKP29376 864 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 ANKRD20A12PQ8NF67 263 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 PALD1Q9ULE6 856 aa8.82□□□□□ -1
TRIM49B-202ENST00000622138 PNMA6EA0A0J9YXQ4 647 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 AP5Z1O43299 807 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 MAP2K2P36507 400 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 CLCN6P51797 869 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 FOXD4L5Q5VV16 416 aaPredicted RBP8.81□□□□□ -1
TRIM49B-202ENST00000622138 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 SPC24Q8NBT2 197 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 FOXD4L4Q8WXT5 416 aaPredicted RBP8.81□□□□□ -1
TRIM49B-202ENST00000622138 INTS4Q96HW7 963 aaKnown RBP8.81□□□□□ -1
TRIM49B-202ENST00000622138 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.81□□□□□ -1
TRIM49B-202ENST00000622138 PIK3C2AO00443 1686 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 KDRP35968 1356 aa8.81□□□□□ -1
TRIM49B-202ENST00000622138 RPS6KA5O75582 802 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 CLSTN1O94985 981 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 TRHP20396 242 aaPredicted RBP8.8□□□□□ -1
TRIM49B-202ENST00000622138 ACTN2P35609 894 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 CUL4AQ13619 759 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 NBPF9Q3BBW0 867 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 LRCH2Q5VUJ6 765 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 ZSCAN25Q6NSZ9 544 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 FILIP1Q7Z7B0 1213 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 NECTIN2Q92692 538 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 EYA1Q99502 592 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 OSBPL3Q9H4L5 887 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 KCND1Q9NSA2 647 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 RGPD8O14715 1765 aaPredicted RBP8.8□□□□□ -1
TRIM49B-202ENST00000622138 RPAP1Q9BWH6 1393 aaPredicted RBP8.8□□□□□ -1
TRIM49B-202ENST00000622138 UBE2HP62256 183 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 SART3Q15020 963 aaKnown RBP8.8□□□□□ -1
TRIM49B-202ENST00000622138 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
TRIM49B-202ENST00000622138 CASC1Q6TDU7 716 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 TMCO3Q6UWJ1 677 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 IL25Q9H293 177 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 NWD1Q149M9 1564 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 SBNO1A3KN83 1393 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 FLT4P35916 1363 aa8.8□□□□□ -1
TRIM49B-202ENST00000622138 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 GADD45BO75293 160 aaPredicted RBP8.79□□□□□ -1
TRIM49B-202ENST00000622138 HMMRO75330 724 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 CDC25BP30305 580 aa8.79□□□□□ -1
TRIM49B-202ENST00000622138 SSR1P43307 286 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms