RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
PCDHGA11-203ENST00000622044 AP5Z1O43299 807 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 EVI5LQ96CN4 794 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 RPAP1Q9BWH6 1393 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 ARID5BQ14865 1188 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 HDAC5Q9UQL6 1122 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 MRVI1Q9Y6F6 885 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 ARAP3Q8WWN8 1544 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 CHST3Q7LGC8 479 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 ERC1Q8IUD2 1116 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 CREBRFQ8IUR6 639 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 NPHP3Q7Z494 1330 aa13.4□□□□□ -0.26
PCDHGA11-203ENST00000622044 ARHGEF40Q8TER5 1519 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 POLR3GO15318 223 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 ZNF75DP51815 510 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 STAP2Q9UGK3 403 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 SMTNL1A8MU46 457 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 LTKP29376 864 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 CEP57L1Q8IYX8 460 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 KIF18AQ8NI77 898 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 SSH3Q8TE77 659 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 KCNQ3O43525 872 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 STK38Q15208 465 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 FSIP1Q8NA03 581 aa13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 LEO1Q8WVC0 666 aaPredicted RBP13.39□□□□□ -0.27
PCDHGA11-203ENST00000622044 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 CPLX1O14810 134 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 ELF2Q15723 593 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 HSP90AA4PQ58FG1 418 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 PDILTQ8N807 584 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 IL17REQ8NFR9 667 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 PI4K2BQ8TCG2 481 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 HIP1O00291 1037 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 DDX46Q7L014 1031 aaKnown RBP13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 CACTINQ8WUQ7 758 aaKnown RBP13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 FRMPD1Q5SYB0 1578 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 TMC6Q7Z403 805 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 BBXQ8WY36 941 aaPredicted RBP13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 FTOQ9C0B1 505 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 NAT10Q9H0A0 1025 aaKnown RBP13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 LGR6Q9HBX8 967 aa13.38□□□□□ -0.27
PCDHGA11-203ENST00000622044 SLC27A2O14975 620 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 Q6ZUG5 572 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 METP08581 1390 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 GTF3C6Q969F1 213 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 PAXBP1Q9Y5B6 917 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 A0A0D9SFI3 127 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 CHMP4AQ9BY43 222 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 OGFRQ9NZT2 677 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
PCDHGA11-203ENST00000622044 SSH2Q76I76 1423 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 PTPRMP28827 1452 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 CCDC66A2RUB6 948 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 SYNE3Q6ZMZ3 975 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 KRT222Q8N1A0 295 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 TTC14Q96N46 770 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 WASHC4Q2M389 1173 aa13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA11-203ENST00000622044 CDK12Q9NYV4 1490 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 VGLL3A8MV65 326 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 URI1O94763 535 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 SERPINC1P01008 464 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 SNW1Q13573 536 aaKnown RBP13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 STX1AQ16623 288 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 NCOA5Q9HCD5 579 aaKnown RBP13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 SPTLC3Q9NUV7 552 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 DIP2CQ9Y2E4 1556 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 KIF20AO95235 890 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 CSB-PGBD3P0DP91 1061 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 CLSTN2Q9H4D0 955 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 TLR7Q9NYK1 1049 aaKnown RBP13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 TNRQ92752 1358 aa13.35□□□□□ -0.27
PCDHGA11-203ENST00000622044 GTF2F1P35269 517 aaKnown RBP eCLIP13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 TMEM87AQ8NBN3 555 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 ANO10Q9NW15 660 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 A0A0G2JS52 829 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 ATP2B1P20020 1258 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 PSME1Q06323 249 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 TTLL5Q6EMB2 1281 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 SYT10Q6XYQ8 523 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 FEZ1Q99689 392 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms