RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 RHPN1Q8TCX5 695 aa15.23■□□□□ 0.03
SCAMP1-207ENST00000621999 PNMA6EA0A0J9YXQ4 647 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 LRRFIP1Q32MZ4 808 aaKnown RBP15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 BOLA2Q9H3K6 86 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 TOMM22Q9NS69 142 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 RUFY2Q8WXA3 655 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 KDM6AO15550 1401 aaPredicted RBP15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 MX1P20591 662 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 ANKRD18AQ8IVF6 992 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 ZNF594Q96JF6 807 aaPredicted RBP15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 HLFQ16534 295 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 AKAP2Q9Y2D5 859 aa15.22■□□□□ 0.03
SCAMP1-207ENST00000621999 BRPF1P55201 1214 aaPredicted RBP15.21■□□□□ 0.03
SCAMP1-207ENST00000621999 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.03
SCAMP1-207ENST00000621999 GNL3LQ9NVN8 582 aaKnown RBP15.21■□□□□ 0.03
SCAMP1-207ENST00000621999 C6orf229H3BNL8 230 aa15.21■□□□□ 0.03
SCAMP1-207ENST00000621999 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
SCAMP1-207ENST00000621999 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.03
SCAMP1-207ENST00000621999 IFIT1P09914 478 aaKnown RBP15.21■□□□□ 0.02
SCAMP1-207ENST00000621999 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.02
SCAMP1-207ENST00000621999 LTN1O94822 1766 aa15.2■□□□□ 0.02
SCAMP1-207ENST00000621999 ITPK1Q13572 414 aa15.2■□□□□ 0.02
SCAMP1-207ENST00000621999 RPS6KA4O75676 772 aa15.2■□□□□ 0.02
SCAMP1-207ENST00000621999 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
SCAMP1-207ENST00000621999 PDE8AO60658 829 aa15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 CDC45O75419 566 aa15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 PEAK1Q9H792 1746 aa15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 ITGA6P23229 1130 aa15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 NOL8Q76FK4 1167 aaKnown RBP15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 DCTPP1Q9H773 170 aa15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 ABCF2Q9UG63 623 aa15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 NOL10Q9BSC4 688 aaKnown RBP15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 SNRKQ9NRH2 765 aa15.19■□□□□ 0.02
SCAMP1-207ENST00000621999 PTF1AQ7RTS3 328 aa15.18■□□□□ 0.02
SCAMP1-207ENST00000621999 POLD1P28340 1107 aa15.18■□□□□ 0.02
SCAMP1-207ENST00000621999 REC8O95072 547 aa15.18■□□□□ 0.02
SCAMP1-207ENST00000621999 CAVIN4Q5BKX8 364 aa15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 ZBTB38Q8NAP3 1195 aaPredicted RBP15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 ISY1Q9ULR0 285 aaKnown RBP15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 IQSEC3Q9UPP2 1182 aaPredicted RBP15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 IDH1O75874 414 aaKnown RBP15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 IL15P40933 162 aaPredicted RBP15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 TSHZ2Q9NRE2 1034 aa15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 NSFL1CQ9UNZ2 370 aaKnown RBP15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 TNS2Q63HR2 1409 aa15.17■□□□□ 0.02
SCAMP1-207ENST00000621999 SLC5A1P13866 664 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 NUCB1Q02818 461 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 LINC00116Q8NCU8 138 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 GLRX3O76003 335 aaKnown RBP15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 TFCP2Q12800 502 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 DEFB132Q7Z7B7 95 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 NLRP10Q86W26 655 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 HSCBQ8IWL3 235 aa15.16■□□□□ 0.02
SCAMP1-207ENST00000621999 PCCAP05165 728 aaPredicted RBP15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 ATP2B3Q16720 1220 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 ECHDC1Q9NTX5 307 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 SHPRHQ149N8 1683 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 SYNE4Q8N205 404 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 ERVV-1B6SEH8 477 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 POTEAQ6S8J7 498 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 TIMM10P62072 90 aa15.15■□□□□ 0.02
SCAMP1-207ENST00000621999 CWC27Q6UX04 472 aaKnown RBP15.14■□□□□ 0.01
SCAMP1-207ENST00000621999 SMC5Q8IY18 1101 aa15.14■□□□□ 0.01
SCAMP1-207ENST00000621999 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
SCAMP1-207ENST00000621999 COL15A1P39059 1388 aa15.14■□□□□ 0.01
SCAMP1-207ENST00000621999 SUSD4Q5VX71 490 aa15.13■□□□□ 0.01
SCAMP1-207ENST00000621999 EYA2O00167 538 aa15.13■□□□□ 0.01
SCAMP1-207ENST00000621999 PDIA6Q15084 440 aa15.13■□□□□ 0.01
SCAMP1-207ENST00000621999 NARFQ9UHQ1 456 aa15.13■□□□□ 0.01
SCAMP1-207ENST00000621999 EIF5P55010 431 aaKnown RBP15.13■□□□□ 0.01
SCAMP1-207ENST00000621999 SERPINB2P05120 415 aa15.12■□□□□ 0.01
SCAMP1-207ENST00000621999 CTSWP56202 376 aa15.12■□□□□ 0.01
SCAMP1-207ENST00000621999 TAF5LO75529 589 aa15.12■□□□□ 0.01
SCAMP1-207ENST00000621999 ERFEQ4G0M1 354 aa15.12■□□□□ 0.01
SCAMP1-207ENST00000621999 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCAMP1-207ENST00000621999 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.12■□□□□ 0.01
SCAMP1-207ENST00000621999 BCL9O00512 1426 aa15.12■□□□□ 0.01
SCAMP1-207ENST00000621999 GOLIM4O00461 696 aa15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 EZH2Q15910 746 aaKnown RBP15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 OTUD7AQ8TE49 926 aaPredicted RBP15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 GREM2Q9H772 168 aa15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 ADCY9O60503 1353 aa15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 ZKSCAN1P17029 563 aaPredicted RBP15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 AHDC1Q5TGY3 1603 aaPredicted RBP15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 PDE1AP54750 535 aa15.11■□□□□ 0.01
SCAMP1-207ENST00000621999 MMP10P09238 476 aa15.1■□□□□ 0.01
SCAMP1-207ENST00000621999 TBC1D9BQ66K14 1250 aa15.1■□□□□ 0.01
SCAMP1-207ENST00000621999 CLEC4GQ6UXB4 293 aa15.1■□□□□ 0.01
SCAMP1-207ENST00000621999 SSH3Q8TE77 659 aa15.1■□□□□ 0.01
SCAMP1-207ENST00000621999 C22orf23Q9BZE7 217 aa15.1■□□□□ 0.01
SCAMP1-207ENST00000621999 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCAMP1-207ENST00000621999 RBM17Q96I25 401 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms