RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 SMC1BQ8NDV3 1235 aa14.88□□□□□ -0.03
LINC00649-218ENST00000620580 APAF1O14727 1248 aa14.87□□□□□ -0.03
LINC00649-218ENST00000620580 TCERG1O14776 1098 aaKnown RBP14.87□□□□□ -0.03
LINC00649-218ENST00000620580 FKBP4Q02790 459 aaKnown RBP eCLIP14.87□□□□□ -0.03
LINC00649-218ENST00000620580 SYNE4Q8N205 404 aa14.87□□□□□ -0.03
LINC00649-218ENST00000620580 CCDC184Q52MB2 194 aa14.86□□□□□ -0.03
LINC00649-218ENST00000620580 RPGRQ92834 1020 aaKnown RBP14.86□□□□□ -0.03
LINC00649-218ENST00000620580 DDX21Q9NR30 783 aaKnown RBP eCLIP14.86□□□□□ -0.03
LINC00649-218ENST00000620580 CHPF2Q9P2E5 772 aa14.86□□□□□ -0.03
LINC00649-218ENST00000620580 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
LINC00649-218ENST00000620580 POTEJP0CG39 1038 aa14.85□□□□□ -0.03
LINC00649-218ENST00000620580 HOXA10P31260 410 aaPredicted RBP14.85□□□□□ -0.03
LINC00649-218ENST00000620580 PARP10Q53GL7 1025 aa14.85□□□□□ -0.03
LINC00649-218ENST00000620580 PPP1R42Q7Z4L9 355 aa14.85□□□□□ -0.03
LINC00649-218ENST00000620580 RTKN2Q8IZC4 609 aa14.85□□□□□ -0.03
LINC00649-218ENST00000620580 UTP14AQ9BVJ6 771 aaKnown RBP14.85□□□□□ -0.03
LINC00649-218ENST00000620580 WDR90Q96KV7 1748 aa14.85□□□□□ -0.03
LINC00649-218ENST00000620580 ZNF541Q9H0D2 1346 aa14.85□□□□□ -0.03
LINC00649-218ENST00000620580 IBTKQ9P2D0 1353 aaPredicted RBP14.85□□□□□ -0.03
LINC00649-218ENST00000620580 NLRP10Q86W26 655 aa14.84□□□□□ -0.03
LINC00649-218ENST00000620580 RBM17Q96I25 401 aaKnown RBP14.84□□□□□ -0.03
LINC00649-218ENST00000620580 CFAP44Q96MT7 982 aa14.84□□□□□ -0.03
LINC00649-218ENST00000620580 MBIPQ9NS73 344 aa14.84□□□□□ -0.03
LINC00649-218ENST00000620580 SNED1Q8TER0 1413 aa14.83□□□□□ -0.03
LINC00649-218ENST00000620580 HCLS1P14317 486 aaPredicted RBP14.83□□□□□ -0.04
LINC00649-218ENST00000620580 IARSP41252 1262 aaKnown RBP14.83□□□□□ -0.04
LINC00649-218ENST00000620580 TCIRG1Q13488 830 aa14.83□□□□□ -0.04
LINC00649-218ENST00000620580 SLC10A5Q5PT55 438 aa14.83□□□□□ -0.04
LINC00649-218ENST00000620580 HDGFL1Q5TGJ6 251 aa14.83□□□□□ -0.04
LINC00649-218ENST00000620580 DUSP27Q5VZP5 1158 aa14.83□□□□□ -0.04
LINC00649-218ENST00000620580 NLRP3Q96P20 1036 aa14.83□□□□□ -0.04
LINC00649-218ENST00000620580 RIC1Q4ADV7 1423 aa14.83□□□□□ -0.04
LINC00649-218ENST00000620580 ZNF853P0CG23 659 aa14.82□□□□□ -0.04
LINC00649-218ENST00000620580 KLRG1Q96E93 195 aa14.82□□□□□ -0.04
LINC00649-218ENST00000620580 CRAMP1Q96RY5 1269 aa14.82□□□□□ -0.04
LINC00649-218ENST00000620580 PCNTO95613 3336 aa14.82□□□□□ -0.04
LINC00649-218ENST00000620580 ELL2O00472 640 aaPredicted RBP14.81□□□□□ -0.04
LINC00649-218ENST00000620580 PPEF1O14829 653 aaPredicted RBP14.81□□□□□ -0.04
LINC00649-218ENST00000620580 HSP90AB3PQ58FF7 597 aa14.81□□□□□ -0.04
LINC00649-218ENST00000620580 PSMD1Q99460 953 aa14.81□□□□□ -0.04
LINC00649-218ENST00000620580 TRMT112Q9UI30 125 aaKnown RBP14.81□□□□□ -0.04
LINC00649-218ENST00000620580 COL4A5P29400 1685 aa14.81□□□□□ -0.04
LINC00649-218ENST00000620580 ATP5J2-PTCD1G3V325 749 aa14.8□□□□□ -0.04
LINC00649-218ENST00000620580 FZD9O00144 591 aa14.8□□□□□ -0.04
LINC00649-218ENST00000620580 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
LINC00649-218ENST00000620580 ANKRD13DQ6ZTN6 518 aa14.8□□□□□ -0.04
LINC00649-218ENST00000620580 L3MBTL3Q96JM7 780 aaPredicted RBP14.8□□□□□ -0.04
LINC00649-218ENST00000620580 TAF1DQ9H5J8 278 aaPredicted RBP14.8□□□□□ -0.04
LINC00649-218ENST00000620580 ABCC4O15439 1325 aa14.8□□□□□ -0.04
LINC00649-218ENST00000620580 HOXB7P09629 217 aa14.79□□□□□ -0.04
LINC00649-218ENST00000620580 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
LINC00649-218ENST00000620580 PLBD2Q8NHP8 589 aa14.79□□□□□ -0.04
LINC00649-218ENST00000620580 IFT57Q9NWB7 429 aa14.79□□□□□ -0.04
LINC00649-218ENST00000620580 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
LINC00649-218ENST00000620580 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
LINC00649-218ENST00000620580 SH3TC1Q8TE82 1336 aa14.78□□□□□ -0.04
LINC00649-218ENST00000620580 C8orf58Q8NAV2 365 aa14.78□□□□□ -0.04
LINC00649-218ENST00000620580 JDP2Q8WYK2 163 aa14.78□□□□□ -0.04
LINC00649-218ENST00000620580 ISCA1Q9BUE6 129 aa14.78□□□□□ -0.04
LINC00649-218ENST00000620580 PHAXQ9H814 394 aaKnown RBP14.78□□□□□ -0.04
LINC00649-218ENST00000620580 ANKRD36CQ5JPF3 1778 aa14.78□□□□□ -0.04
LINC00649-218ENST00000620580 IQCA1LA6NCM1 817 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 GNAI1P63096 354 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 EAPPQ56P03 285 aaPredicted RBP14.77□□□□□ -0.05
LINC00649-218ENST00000620580 RTL5Q5HYW3 569 aaPredicted RBP14.77□□□□□ -0.05
LINC00649-218ENST00000620580 LARGE2Q8N3Y3 721 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 FAM89AQ96GI7 184 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 HYPKQ9NX55 129 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 ATP6V0A2Q9Y487 856 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 GJA3Q9Y6H8 435 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 TAF1P21675 1872 aa14.77□□□□□ -0.05
LINC00649-218ENST00000620580 LAMB2P55268 1798 aa14.76□□□□□ -0.05
LINC00649-218ENST00000620580 EPHX2P34913 555 aa14.76□□□□□ -0.05
LINC00649-218ENST00000620580 TSPYL6Q8N831 410 aa14.76□□□□□ -0.05
LINC00649-218ENST00000620580 JMYQ8N9B5 988 aa14.76□□□□□ -0.05
LINC00649-218ENST00000620580 HACL1Q9UJ83 578 aa14.76□□□□□ -0.05
LINC00649-218ENST00000620580 SCN4AP35499 1836 aa14.76□□□□□ -0.05
LINC00649-218ENST00000620580 PPIP5K2O43314 1243 aa14.75□□□□□ -0.05
LINC00649-218ENST00000620580 AOC3Q16853 763 aa14.75□□□□□ -0.05
LINC00649-218ENST00000620580 DDX46Q7L014 1031 aaKnown RBP14.75□□□□□ -0.05
LINC00649-218ENST00000620580 LDHDQ86WU2 507 aa14.75□□□□□ -0.05
LINC00649-218ENST00000620580 GPC2Q8N158 579 aa14.75□□□□□ -0.05
LINC00649-218ENST00000620580 BBOX1O75936 387 aa14.74□□□□□ -0.05
LINC00649-218ENST00000620580 EIF6P56537 245 aaKnown RBP14.74□□□□□ -0.05
LINC00649-218ENST00000620580 GRAPQ13588 217 aa14.74□□□□□ -0.05
LINC00649-218ENST00000620580 GRIPAP1Q4V328 841 aa14.74□□□□□ -0.05
LINC00649-218ENST00000620580 RIC3Q7Z5B4 369 aa14.74□□□□□ -0.05
LINC00649-218ENST00000620580 SP8Q8IXZ3 490 aa14.74□□□□□ -0.05
LINC00649-218ENST00000620580 GRAPLQ8TC17 118 aaPredicted RBP14.74□□□□□ -0.05
LINC00649-218ENST00000620580 TSR2Q969E8 191 aaKnown RBP14.74□□□□□ -0.05
LINC00649-218ENST00000620580 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
LINC00649-218ENST00000620580 ITGBL1O95965 494 aaPredicted RBP14.73□□□□□ -0.05
LINC00649-218ENST00000620580 CALD1Q05682 793 aaKnown RBP14.73□□□□□ -0.05
LINC00649-218ENST00000620580 MAP1SQ66K74 1059 aaPredicted RBP14.73□□□□□ -0.05
LINC00649-218ENST00000620580 NIM1KQ8IY84 436 aa14.73□□□□□ -0.05
LINC00649-218ENST00000620580 JARID2Q92833 1246 aaPredicted RBP14.73□□□□□ -0.05
LINC00649-218ENST00000620580 CELF1Q92879 486 aaKnown RBP14.73□□□□□ -0.05
LINC00649-218ENST00000620580 TMX4Q9H1E5 349 aaPredicted RBP14.73□□□□□ -0.05
LINC00649-218ENST00000620580 PASKQ96RG2 1323 aa14.72□□□□□ -0.05
LINC00649-218ENST00000620580 EPS15P42566 896 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms