RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 POTEHQ6S545 545 aa10.41□□□□□ -0.74
SENP3-210ENST00000619785 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
SENP3-210ENST00000619785 POTEJP0CG39 1038 aa10.4□□□□□ -0.74
SENP3-210ENST00000619785 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
SENP3-210ENST00000619785 DNAJC5GQ8N7S2 189 aa10.4□□□□□ -0.74
SENP3-210ENST00000619785 PCDHGC3Q9UN70 934 aa10.4□□□□□ -0.74
SENP3-210ENST00000619785 EDC4Q6P2E9 1401 aaKnown RBP10.4□□□□□ -0.75
SENP3-210ENST00000619785 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
SENP3-210ENST00000619785 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
SENP3-210ENST00000619785 RFX1P22670 979 aa10.39□□□□□ -0.75
SENP3-210ENST00000619785 IRF5Q13568 498 aa10.39□□□□□ -0.75
SENP3-210ENST00000619785 COL23A1Q86Y22 540 aaPredicted RBP10.39□□□□□ -0.75
SENP3-210ENST00000619785 HMX1Q9NP08 348 aaPredicted RBP10.39□□□□□ -0.75
SENP3-210ENST00000619785 MEGF6O75095 1541 aa10.38□□□□□ -0.75
SENP3-210ENST00000619785 SLC10A3P09131 477 aa10.38□□□□□ -0.75
SENP3-210ENST00000619785 HMGB2P26583 209 aaKnown RBP10.38□□□□□ -0.75
SENP3-210ENST00000619785 ANKRD24Q8TF21 1146 aa10.38□□□□□ -0.75
SENP3-210ENST00000619785 TFCP2L1Q9NZI6 479 aa10.38□□□□□ -0.75
SENP3-210ENST00000619785 SBF1O95248 1867 aa10.38□□□□□ -0.75
SENP3-210ENST00000619785 PATL2C9JE40 543 aaKnown RBP10.37□□□□□ -0.75
SENP3-210ENST00000619785 VAC14Q08AM6 782 aa10.37□□□□□ -0.75
SENP3-210ENST00000619785 IP6K1Q92551 441 aa10.37□□□□□ -0.75
SENP3-210ENST00000619785 HLA-CQ95604 372 aa10.37□□□□□ -0.75
SENP3-210ENST00000619785 ZBED2Q9BTP6 218 aa10.37□□□□□ -0.75
SENP3-210ENST00000619785 NLRP2Q9NX02 1062 aa10.37□□□□□ -0.75
SENP3-210ENST00000619785 ANKRD26Q9UPS8 1709 aa10.36□□□□□ -0.75
SENP3-210ENST00000619785 TMCO4Q5TGY1 634 aa10.36□□□□□ -0.75
SENP3-210ENST00000619785 FLAD1Q8NFF5 587 aa10.36□□□□□ -0.75
SENP3-210ENST00000619785 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
SENP3-210ENST00000619785 PUS7Q96PZ0 661 aaKnown RBP10.36□□□□□ -0.75
SENP3-210ENST00000619785 TRIM34Q9BYJ4 488 aa10.36□□□□□ -0.75
SENP3-210ENST00000619785 N4BP2Q86UW6 1770 aaPredicted RBP10.36□□□□□ -0.75
SENP3-210ENST00000619785 CGNL1Q0VF96 1302 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 PCNTO95613 3336 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 NCAPD2Q15021 1401 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 C10orf71Q711Q0 1435 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 APLP1P51693 650 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 SLF2Q8IX21 1173 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
SENP3-210ENST00000619785 RABGEF1Q9UJ41 708 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 RTL1A6NKG5 1358 aa10.35□□□□□ -0.75
SENP3-210ENST00000619785 COL5A3P25940 1745 aaPredicted RBP10.35□□□□□ -0.75
SENP3-210ENST00000619785 TNRC6CQ9HCJ0 1690 aaKnown RBP10.34□□□□□ -0.75
SENP3-210ENST00000619785 NSD3Q9BZ95 1437 aa10.34□□□□□ -0.75
SENP3-210ENST00000619785 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.34□□□□□ -0.75
SENP3-210ENST00000619785 JMYQ8N9B5 988 aa10.34□□□□□ -0.75
SENP3-210ENST00000619785 ADAMTS19Q8TE59 1207 aa10.34□□□□□ -0.75
SENP3-210ENST00000619785 GZF1Q9H116 711 aaPredicted RBP10.34□□□□□ -0.75
SENP3-210ENST00000619785 CCNL1Q9UK58 526 aaPredicted RBP10.34□□□□□ -0.75
SENP3-210ENST00000619785 CFAP99D6REC4 459 aa10.33□□□□□ -0.76
SENP3-210ENST00000619785 FUT2Q10981 343 aa10.33□□□□□ -0.76
SENP3-210ENST00000619785 NME9Q86XW9 330 aa10.33□□□□□ -0.76
SENP3-210ENST00000619785 PNMA1Q8ND90 353 aa10.33□□□□□ -0.76
SENP3-210ENST00000619785 PPP1R12CQ9BZL4 782 aa10.33□□□□□ -0.76
SENP3-210ENST00000619785 USTQ9Y2C2 406 aa10.33□□□□□ -0.76
SENP3-210ENST00000619785 USP47Q96K76 1375 aa10.33□□□□□ -0.76
SENP3-210ENST00000619785 A0A1W2PP64 1363 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 POTEB2H3BUK9 544 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 RNF40O75150 1001 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 TOMM70O94826 608 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 CFHP08603 1231 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 SOX11P35716 441 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 PSEN2P49810 448 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 KCNQ4P56696 695 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 IGSF1Q8N6C5 1336 aa10.32□□□□□ -0.76
SENP3-210ENST00000619785 PXDNLA1KZ92 1463 aa10.31□□□□□ -0.76
SENP3-210ENST00000619785 KIF20BQ96Q89 1820 aa10.31□□□□□ -0.76
SENP3-210ENST00000619785 C4AP0C0L4 1744 aa10.31□□□□□ -0.76
SENP3-210ENST00000619785 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
SENP3-210ENST00000619785 ZCRB1Q8TBF4 217 aaKnown RBP10.31□□□□□ -0.76
SENP3-210ENST00000619785 KIF24Q5T7B8 1368 aa10.3□□□□□ -0.76
SENP3-210ENST00000619785 SEMA3FQ13275 785 aa10.3□□□□□ -0.76
SENP3-210ENST00000619785 DDX54Q8TDD1 881 aaKnown RBP10.3□□□□□ -0.76
SENP3-210ENST00000619785 L3MBTL2Q969R5 705 aa10.3□□□□□ -0.76
SENP3-210ENST00000619785 ALG2Q9H553 416 aa10.3□□□□□ -0.76
SENP3-210ENST00000619785 MAP3K19Q56UN5 1328 aa10.3□□□□□ -0.76
SENP3-210ENST00000619785 ROCK2O75116 1388 aaKnown RBP10.29□□□□□ -0.76
SENP3-210ENST00000619785 PALLDQ8WX93 1383 aa10.29□□□□□ -0.76
SENP3-210ENST00000619785 MYH14Q7Z406 1995 aaKnown RBP10.29□□□□□ -0.76
SENP3-210ENST00000619785 PALM3A6NDB9 673 aaPredicted RBP10.29□□□□□ -0.76
SENP3-210ENST00000619785 ARHGAP33O14559 1287 aa10.29□□□□□ -0.76
SENP3-210ENST00000619785 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
SENP3-210ENST00000619785 HOXC9P31274 260 aa10.29□□□□□ -0.76
SENP3-210ENST00000619785 KMT5BQ4FZB7 885 aa10.29□□□□□ -0.76
SENP3-210ENST00000619785 AMIGO3Q86WK7 504 aa10.29□□□□□ -0.76
SENP3-210ENST00000619785 PRR7Q8TB68 274 aa10.29□□□□□ -0.76
SENP3-210ENST00000619785 DLEC1Q9Y238 1755 aa10.29□□□□□ -0.76
SENP3-210ENST00000619785 PLEKHG2Q9H7P9 1386 aa10.28□□□□□ -0.76
SENP3-210ENST00000619785 GPR37L1O60883 481 aa10.28□□□□□ -0.76
SENP3-210ENST00000619785 SSFA2P28290 1259 aa10.28□□□□□ -0.76
SENP3-210ENST00000619785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.28□□□□□ -0.76
SENP3-210ENST00000619785 EPS8L1Q8TE68 723 aa10.28□□□□□ -0.76
SENP3-210ENST00000619785 ADAMTS7Q9UKP4 1686 aa10.28□□□□□ -0.76
SENP3-210ENST00000619785 BRD1O95696 1058 aa10.27□□□□□ -0.77
SENP3-210ENST00000619785 KCNA1Q09470 495 aa10.27□□□□□ -0.77
SENP3-210ENST00000619785 MSL1Q68DK7 614 aa10.27□□□□□ -0.77
SENP3-210ENST00000619785 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
SENP3-210ENST00000619785 SYMPKQ92797 1274 aaKnown RBP10.27□□□□□ -0.77
SENP3-210ENST00000619785 KLRG1Q96E93 195 aa10.27□□□□□ -0.77
SENP3-210ENST00000619785 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms