RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
PCDHGA3-203ENST00000619750 CREB3L3Q68CJ9 461 aa17.14■□□□□ 0.34
PCDHGA3-203ENST00000619750 FSD1Q9BTV5 496 aa17.14■□□□□ 0.34
PCDHGA3-203ENST00000619750 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
PCDHGA3-203ENST00000619750 CKAP2LQ8IYA6 745 aa17.14■□□□□ 0.33
PCDHGA3-203ENST00000619750 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
PCDHGA3-203ENST00000619750 PDCL3Q9H2J4 239 aa17.14■□□□□ 0.33
PCDHGA3-203ENST00000619750 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
PCDHGA3-203ENST00000619750 CACNA1FO60840 1977 aa17.14■□□□□ 0.33
PCDHGA3-203ENST00000619750 ZNF589Q86UQ0 364 aaPredicted RBP17.14■□□□□ 0.33
PCDHGA3-203ENST00000619750 LTN1O94822 1766 aa17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 RNMTO43148 476 aaKnown RBP17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 GIGYF1O75420 1035 aaPredicted RBP17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 HSP90AB4PQ58FF6 505 aa17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 RUFY2Q8WXA3 655 aa17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 ORAI2Q96SN7 254 aa17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
PCDHGA3-203ENST00000619750 TTC41PQ6P2S7 1318 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 USP54Q70EL1 1684 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 ZKSCAN1P17029 563 aaPredicted RBP17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 LIG1P18858 919 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 KSR2Q6VAB6 950 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 TTC6Q86TZ1 520 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 GPATCH3Q96I76 525 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 ZSWIM6Q9HCJ5 1215 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 AXIN2Q9Y2T1 843 aa17.12■□□□□ 0.33
PCDHGA3-203ENST00000619750 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 CSPP1Q1MSJ5 1256 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 TMEM87AQ8NBN3 555 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 GRM8O00222 908 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 SLC27A2O14975 620 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 VPS53Q5VIR6 699 aa17.11■□□□□ 0.33
PCDHGA3-203ENST00000619750 SASS6Q6UVJ0 657 aa17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 RIC3Q7Z5B4 369 aa17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 EVI5LQ96CN4 794 aa17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 BABAM1Q9NWV8 329 aa17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 DCCP43146 1447 aa17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 CEBPZQ03701 1054 aaKnown RBP17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 NOLC1Q14978 699 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
PCDHGA3-203ENST00000619750 KDM4AO75164 1064 aa17.09■□□□□ 0.33
PCDHGA3-203ENST00000619750 LUZP1Q86V48 1076 aa17.09■□□□□ 0.33
PCDHGA3-203ENST00000619750 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
PCDHGA3-203ENST00000619750 JAK2O60674 1132 aa17.09■□□□□ 0.33
PCDHGA3-203ENST00000619750 MCM5P33992 734 aa17.09■□□□□ 0.33
PCDHGA3-203ENST00000619750 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
PCDHGA3-203ENST00000619750 ATP6V1DQ9Y5K8 247 aa17.09■□□□□ 0.33
PCDHGA3-203ENST00000619750 GCP02774 474 aa17.08■□□□□ 0.33
PCDHGA3-203ENST00000619750 IGKV5-2P06315 115 aa17.08■□□□□ 0.33
PCDHGA3-203ENST00000619750 DNAJC2Q99543 621 aaKnown RBP17.08■□□□□ 0.33
PCDHGA3-203ENST00000619750 PYCARDQ9ULZ3 195 aa17.08■□□□□ 0.33
PCDHGA3-203ENST00000619750 KIF1AQ12756 1690 aa17.08■□□□□ 0.32
PCDHGA3-203ENST00000619750 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.32
PCDHGA3-203ENST00000619750 MYD88Q99836 296 aa17.08■□□□□ 0.32
PCDHGA3-203ENST00000619750 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
PCDHGA3-203ENST00000619750 FUCA2Q9BTY2 467 aa17.07■□□□□ 0.32
PCDHGA3-203ENST00000619750 PRDM10Q9NQV6 1147 aa17.07■□□□□ 0.32
PCDHGA3-203ENST00000619750 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
PCDHGA3-203ENST00000619750 C1orf167Q5SNV9 1468 aa17.07■□□□□ 0.32
PCDHGA3-203ENST00000619750 ATP5J2-PTCD1G3V325 749 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 MTX1Q13505 466 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 MAP4K1Q92918 833 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 KCNF1Q9H3M0 494 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 N4BP2Q86UW6 1770 aaPredicted RBP17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 A0A087WWV3 80 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 PIBF1Q8WXW3 757 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 DACT1Q9NYF0 836 aa17.06■□□□□ 0.32
PCDHGA3-203ENST00000619750 COPS6Q7L5N1 327 aa17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 MST1RQ04912 1400 aa17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 ALDH1L1O75891 902 aa17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 HOXB7P09629 217 aa17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 TOB2Q14106 344 aaPredicted RBP17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 LINS1Q8NG48 757 aa17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 SH2B1Q9NRF2 756 aaPredicted RBP17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
PCDHGA3-203ENST00000619750 EPB41L2O43491 1005 aaKnown RBP17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 ERC1Q8IUD2 1116 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 NFATC2IPQ8NCF5 419 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 GOLGA6L4A6NEF3 574 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 KRT85P78386 507 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 PDIA6Q15084 440 aa17.04■□□□□ 0.32
PCDHGA3-203ENST00000619750 UVSSAQ2YD98 709 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms