RNA–Protein interactions for RNA: ENST00000619158.1

CDH11-219, Transcript of cadherin 11, humanhuman

Gene CDH11, Length 3,639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-219ENST00000619158 WDR43Q15061 677 aaKnown RBP eCLIP6.89□□□□□ -1.31
CDH11-219ENST00000619158 RASEFQ8IZ41 740 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 ZBED9Q6R2W3 1325 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 APAF1O14727 1248 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 R3HDM1Q15032 1099 aaKnown RBP6.89□□□□□ -1.31
CDH11-219ENST00000619158 MAP3K15Q6ZN16 1313 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 CRY2Q49AN0 593 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 SPDYE1Q8NFV5 336 aaPredicted RBP6.89□□□□□ -1.31
CDH11-219ENST00000619158 PRDM16Q9HAZ2 1276 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 USP16Q9Y5T5 823 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 CDK5RAP2Q96SN8 1893 aa6.89□□□□□ -1.31
CDH11-219ENST00000619158 CERS3Q8IU89 383 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 ISCA1Q9BUE6 129 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH11-219ENST00000619158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.88□□□□□ -1.31
CDH11-219ENST00000619158 SLC10A5Q5PT55 438 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 DUSP27Q5VZP5 1158 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 CCDC146Q8IYE0 955 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 THUMPD2Q9BTF0 503 aaKnown RBP6.88□□□□□ -1.31
CDH11-219ENST00000619158 UBN2Q6ZU65 1347 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 CASP7P55210 303 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
CDH11-219ENST00000619158 CCDC136Q96JN2 1154 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 MRS2Q9HD23 443 aa6.88□□□□□ -1.31
CDH11-219ENST00000619158 VAMP4O75379 141 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 TEFQ10587 303 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 ZNF592Q92610 1267 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 ARID3AQ99856 593 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 ABCC12Q96J65 1359 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 LTBP3Q9NS15 1303 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 SCN9AQ15858 1988 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 GTPBP6O43824 516 aaPredicted RBP6.87□□□□□ -1.31
CDH11-219ENST00000619158 NTSR2O95665 410 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 PDZRN3Q9UPQ7 1066 aa6.87□□□□□ -1.31
CDH11-219ENST00000619158 CDHR2Q9BYE9 1310 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 STARD3NLO95772 234 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 C8orf58Q8NAV2 365 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 RTF1Q92541 710 aaKnown RBP6.86□□□□□ -1.31
CDH11-219ENST00000619158 AK7Q96M32 723 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 MTMR7Q9Y216 660 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
CDH11-219ENST00000619158 IRS2Q9Y4H2 1338 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 PROSER3Q2NL68 480 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 SPON1Q9HCB6 807 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 A0A0G2JS52 829 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 GNPATO15228 680 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 KCNQ4P56696 695 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 TGFB2P61812 414 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 ALDH1L2Q3SY69 923 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 PLA2G12BQ9BX93 195 aa6.86□□□□□ -1.31
CDH11-219ENST00000619158 NLGN1Q8N2Q7 840 aa6.85□□□□□ -1.31
CDH11-219ENST00000619158 AKAP11Q9UKA4 1901 aa6.85□□□□□ -1.31
CDH11-219ENST00000619158 HOXA10P31260 410 aaPredicted RBP6.85□□□□□ -1.31
CDH11-219ENST00000619158 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
CDH11-219ENST00000619158 GIGYF2Q6Y7W6 1299 aaKnown RBP6.85□□□□□ -1.31
CDH11-219ENST00000619158 TSPYL4Q9UJ04 414 aa6.85□□□□□ -1.31
CDH11-219ENST00000619158 TRPM7Q96QT4 1865 aa6.85□□□□□ -1.31
CDH11-219ENST00000619158 E9PSI1 815 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 NFIXQ14938 502 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 TSPYL6Q8N831 410 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 ABCC4O15439 1325 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 A1BGP04217 495 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 DIEXFQ68CQ4 756 aaKnown RBP6.84□□□□□ -1.31
CDH11-219ENST00000619158 TTC5Q8N0Z6 440 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 PLBD2Q8NHP8 589 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 NUBP1P53384 320 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 TBC1D9BQ66K14 1250 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 MYH7P12883 1935 aa6.84□□□□□ -1.31
CDH11-219ENST00000619158 PSDA5PKW4 1024 aaPredicted RBP6.83□□□□□ -1.32
CDH11-219ENST00000619158 MRPL50Q8N5N7 158 aaKnown RBP6.83□□□□□ -1.32
CDH11-219ENST00000619158 KRT24Q2M2I5 525 aa6.83□□□□□ -1.32
CDH11-219ENST00000619158 STYK1Q6J9G0 422 aa6.83□□□□□ -1.32
CDH11-219ENST00000619158 DBF4Q9UBU7 674 aaPredicted RBP6.83□□□□□ -1.32
CDH11-219ENST00000619158 SRP68Q9UHB9 627 aaKnown RBP6.83□□□□□ -1.32
CDH11-219ENST00000619158 USPL1Q5W0Q7 1092 aa6.83□□□□□ -1.32
CDH11-219ENST00000619158 PCDHB8Q9UN66 801 aa6.83□□□□□ -1.32
CDH11-219ENST00000619158 RRP7AQ9Y3A4 280 aaKnown RBP6.83□□□□□ -1.32
CDH11-219ENST00000619158 PCDHB13Q9Y5F0 798 aa6.83□□□□□ -1.32
CDH11-219ENST00000619158 ZC3H4Q9UPT8 1303 aaKnown RBP6.83□□□□□ -1.32
CDH11-219ENST00000619158 CLSTN1O94985 981 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 HLFQ16534 295 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 PRR5LQ6MZQ0 368 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 TFCP2L1Q9NZI6 479 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 SYTL4Q96C24 671 aaPredicted RBP6.82□□□□□ -1.32
CDH11-219ENST00000619158 PTPRCP08575 1304 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 PARP10Q53GL7 1025 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 TTLL7Q6ZT98 887 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 ARHGAP45Q92619 1136 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 MIS18AQ9NYP9 233 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 CHPF2Q9P2E5 772 aa6.82□□□□□ -1.32
CDH11-219ENST00000619158 PTCD1O75127 700 aaKnown RBP6.81□□□□□ -1.32
CDH11-219ENST00000619158 RBM42Q9BTD8 480 aaKnown RBP6.81□□□□□ -1.32
CDH11-219ENST00000619158 RTFDC1Q9BY42 306 aaPredicted RBP6.81□□□□□ -1.32
CDH11-219ENST00000619158 MYH16Q9H6N6 1097 aa6.81□□□□□ -1.32
CDH11-219ENST00000619158 OTOFQ9HC10 1997 aa6.81□□□□□ -1.32
CDH11-219ENST00000619158 TCIRG1Q13488 830 aa6.81□□□□□ -1.32
CDH11-219ENST00000619158 NLRP10Q86W26 655 aa6.81□□□□□ -1.32
CDH11-219ENST00000619158 DZIP3Q86Y13 1208 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms