RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
CBWD1-228ENST00000619157 ATXN7L1Q9ULK2 861 aaPredicted RBP11.62□□□□□ -0.55
CBWD1-228ENST00000619157 BNIP3LO60238 219 aa11.61□□□□□ -0.55
CBWD1-228ENST00000619157 NEUROD2Q15784 382 aa11.61□□□□□ -0.55
CBWD1-228ENST00000619157 LINC00114Q6XXX2 140 aa11.61□□□□□ -0.55
CBWD1-228ENST00000619157 C3P01024 1663 aa11.61□□□□□ -0.55
CBWD1-228ENST00000619157 LBRQ14739 615 aaKnown RBP11.6□□□□□ -0.55
CBWD1-228ENST00000619157 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
CBWD1-228ENST00000619157 SLCO4C1Q6ZQN7 724 aa11.6□□□□□ -0.55
CBWD1-228ENST00000619157 SNRKQ9NRH2 765 aa11.6□□□□□ -0.55
CBWD1-228ENST00000619157 ETNK1Q9HBU6 452 aa11.59□□□□□ -0.55
CBWD1-228ENST00000619157 DNMT1P26358 1616 aaKnown RBP11.59□□□□□ -0.55
CBWD1-228ENST00000619157 DAPK1P53355 1430 aa11.59□□□□□ -0.55
CBWD1-228ENST00000619157 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
CBWD1-228ENST00000619157 PLA2G4AP47712 749 aa11.58□□□□□ -0.56
CBWD1-228ENST00000619157 TLR1Q15399 786 aa11.58□□□□□ -0.56
CBWD1-228ENST00000619157 ESCO1Q5FWF5 840 aa11.58□□□□□ -0.56
CBWD1-228ENST00000619157 PPARGC1BQ86YN6 1023 aaKnown RBP11.58□□□□□ -0.56
CBWD1-228ENST00000619157 Q8N3U1 123 aa11.58□□□□□ -0.56
CBWD1-228ENST00000619157 NDFIP2Q9NV92 336 aa11.58□□□□□ -0.56
CBWD1-228ENST00000619157 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 MROH2AA6NES4 1674 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 CLTCQ00610 1675 aaKnown RBP11.57□□□□□ -0.56
CBWD1-228ENST00000619157 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 HSPA2P54652 639 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 GGT6Q6P531 493 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 ALYREFQ86V81 257 aaKnown RBP11.57□□□□□ -0.56
CBWD1-228ENST00000619157 RHBDD1Q8TEB9 315 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 CNTLNQ9NXG0 1405 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
CBWD1-228ENST00000619157 ZMYM3Q14202 1370 aa11.56□□□□□ -0.56
CBWD1-228ENST00000619157 BANK1Q8NDB2 785 aa11.56□□□□□ -0.56
CBWD1-228ENST00000619157 DOLKQ9UPQ8 538 aa11.56□□□□□ -0.56
CBWD1-228ENST00000619157 PTPRKQ15262 1439 aa11.55□□□□□ -0.56
CBWD1-228ENST00000619157 NEURL1BA8MQ27 555 aa11.55□□□□□ -0.56
CBWD1-228ENST00000619157 C1QTNF9BB2RNN3 333 aa11.55□□□□□ -0.56
CBWD1-228ENST00000619157 KIF3BO15066 747 aa11.55□□□□□ -0.56
CBWD1-228ENST00000619157 EPXP11678 715 aa11.55□□□□□ -0.56
CBWD1-228ENST00000619157 BTBD6Q96KE9 485 aa11.55□□□□□ -0.56
CBWD1-228ENST00000619157 RNF17Q9BXT8 1623 aaKnown RBP11.54□□□□□ -0.56
CBWD1-228ENST00000619157 GNB5O14775 395 aa11.54□□□□□ -0.56
CBWD1-228ENST00000619157 OXLD1Q5BKU9 147 aa11.54□□□□□ -0.56
CBWD1-228ENST00000619157 TBC1D9Q6ZT07 1266 aa11.54□□□□□ -0.56
CBWD1-228ENST00000619157 CRISPLD1Q9H336 500 aa11.54□□□□□ -0.56
CBWD1-228ENST00000619157 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
CBWD1-228ENST00000619157 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
CBWD1-228ENST00000619157 CHRNA4P43681 627 aa11.53□□□□□ -0.56
CBWD1-228ENST00000619157 CD163Q86VB7 1156 aa11.53□□□□□ -0.56
CBWD1-228ENST00000619157 RNF135Q8IUD6 432 aa11.53□□□□□ -0.56
CBWD1-228ENST00000619157 DNAAF2Q9NVR5 837 aaKnown RBP11.53□□□□□ -0.56
CBWD1-228ENST00000619157 DUOX2Q9NRD8 1548 aa11.53□□□□□ -0.56
CBWD1-228ENST00000619157 KDM5DQ9BY66 1539 aa11.52□□□□□ -0.57
CBWD1-228ENST00000619157 DGKGP49619 791 aa11.52□□□□□ -0.57
CBWD1-228ENST00000619157 CHIC2Q9UKJ5 165 aa11.52□□□□□ -0.57
CBWD1-228ENST00000619157 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.57
CBWD1-228ENST00000619157 NPATQ14207 1427 aa11.52□□□□□ -0.57
CBWD1-228ENST00000619157 NCOA1Q15788 1441 aa11.52□□□□□ -0.57
CBWD1-228ENST00000619157 ADGRL2O95490 1459 aa11.51□□□□□ -0.57
CBWD1-228ENST00000619157 ATP4AP20648 1035 aa11.51□□□□□ -0.57
CBWD1-228ENST00000619157 ZCCHC2Q9C0B9 1178 aaKnown RBP11.51□□□□□ -0.57
CBWD1-228ENST00000619157 RRP7BPQ9NSQ0 103 aa11.51□□□□□ -0.57
CBWD1-228ENST00000619157 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
CBWD1-228ENST00000619157 UHRF1BP1Q6BDS2 1440 aa11.51□□□□□ -0.57
CBWD1-228ENST00000619157 ABCC3O15438 1527 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 DCDC2BA2VCK2 349 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 SOCS7O14512 581 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 ARAFP10398 606 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 USP4Q13107 963 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
CBWD1-228ENST00000619157 AIDAQ96BJ3 306 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 ERBINQ96RT1 1412 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 FAM135AQ9P2D6 1515 aa11.5□□□□□ -0.57
CBWD1-228ENST00000619157 APBB1O00213 710 aa11.49□□□□□ -0.57
CBWD1-228ENST00000619157 SLFNL1Q499Z3 407 aa11.49□□□□□ -0.57
CBWD1-228ENST00000619157 HCN2Q9UL51 889 aa11.49□□□□□ -0.57
CBWD1-228ENST00000619157 PRDM15P57071 1507 aaPredicted RBP11.49□□□□□ -0.57
CBWD1-228ENST00000619157 PIK3R2O00459 728 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 CD33P20138 364 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 SCNN1DP51172 638 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 FIGNL1Q6PIW4 674 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 CHSY3Q70JA7 882 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 PHTF2Q8N3S3 785 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 PCDHGC4Q9Y5F7 938 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 PZPP20742 1482 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 DEPDC5O75140 1603 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 MYO3AQ8NEV4 1616 aa11.48□□□□□ -0.57
CBWD1-228ENST00000619157 SETD1BQ9UPS6 1966 aaKnown RBP11.47□□□□□ -0.57
CBWD1-228ENST00000619157 STRCQ7RTU9 1775 aa11.47□□□□□ -0.57
CBWD1-228ENST00000619157 ANKRD30AQ9BXX3 1397 aa11.47□□□□□ -0.57
CBWD1-228ENST00000619157 WASHC2CQ9Y4E1 1318 aa11.47□□□□□ -0.57
CBWD1-228ENST00000619157 ATXN7O15265 892 aaPredicted RBP11.47□□□□□ -0.57
CBWD1-228ENST00000619157 VWDEQ8N2E2 1590 aa11.46□□□□□ -0.57
CBWD1-228ENST00000619157 GDF10P55107 478 aa11.46□□□□□ -0.57
CBWD1-228ENST00000619157 BCANQ96GW7 911 aa11.46□□□□□ -0.57
CBWD1-228ENST00000619157 NOP53Q9NZM5 478 aaKnown RBP11.46□□□□□ -0.57
CBWD1-228ENST00000619157 KLF15Q9UIH9 416 aa11.46□□□□□ -0.57
CBWD1-228ENST00000619157 CEP152O94986 1710 aa11.46□□□□□ -0.58
CBWD1-228ENST00000619157 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.58
CBWD1-228ENST00000619157 RRBP1Q9P2E9 1410 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms