RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 UBA7P41226 1012 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 NCBP1Q09161 790 aaKnown RBP12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 CRNKL1Q9BZJ0 848 aaKnown RBP12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 KIF4AO95239 1232 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 CKAP2LQ8IYA6 745 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 ERICH4A6NGS2 130 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 B4DLN1 442 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 MRPL12P52815 198 aaKnown RBP12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 LIMCH1Q9UPQ0 1083 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 DNA2P51530 1060 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 RMND1Q9NWS8 449 aa12.82□□□□□ -0.36
CCDC144B-208ENST00000618081 MCM4P33991 863 aa12.81□□□□□ -0.36
CCDC144B-208ENST00000618081 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
CCDC144B-208ENST00000618081 DNAAF4Q8WXU2 420 aa12.81□□□□□ -0.36
CCDC144B-208ENST00000618081 NAIPQ13075 1403 aa12.81□□□□□ -0.36
CCDC144B-208ENST00000618081 GOLIM4O00461 696 aa12.81□□□□□ -0.36
CCDC144B-208ENST00000618081 CCDC152Q4G0S7 254 aa12.81□□□□□ -0.36
CCDC144B-208ENST00000618081 HMG20BQ9P0W2 317 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 CTR9Q6PD62 1173 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 URI1O94763 535 aaPredicted RBP12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 METAP2P50579 478 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 FERMT3Q86UX7 667 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 GUCY1B3Q02153 619 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 ZNF354CQ86Y25 554 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 OGFOD1Q8N543 542 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 RAB3IL1Q8TBN0 382 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 CAVIN2O95810 425 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 C16orf71Q8IYS4 520 aaPredicted RBP12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
CCDC144B-208ENST00000618081 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 DDX19AQ9NUU7 478 aaKnown RBP12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 CGNQ9P2M7 1197 aaKnown RBP12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 NESP48681 1621 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 TSPY3P0CV98 308 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 TSPY8P0CW00 308 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 IARSP41252 1262 aaKnown RBP12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 CFAP57Q96MR6 1250 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 ADGRL1O94910 1474 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 VAT1LQ9HCJ6 419 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 JADE2Q9NQC1 790 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 PRPHP41219 470 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 KIAA0753Q2KHM9 967 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 NCOA7Q8NI08 942 aa12.79□□□□□ -0.36
CCDC144B-208ENST00000618081 MAP3K2Q9Y2U5 619 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 KRT23Q9C075 422 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 ESPNB1AK53 854 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 NBPF5PQ86XG9 351 aaPredicted RBP12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 CEP112Q8N8E3 955 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 RGS22Q8NE09 1264 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 BMP15O95972 392 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 IDEP14735 1019 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 LDHAL6AQ6ZMR3 332 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 RASAL2Q9UJF2 1139 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 GPTP24298 496 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 CKAP4Q07065 602 aaKnown RBP12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 ZSCAN30Q86W11 494 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 SELENOOQ9BVL4 669 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 IMPG2Q9BZV3 1241 aa12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 IQCGQ9H095 443 aaKnown RBP12.78□□□□□ -0.36
CCDC144B-208ENST00000618081 SLFN5Q08AF3 891 aa12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 CTAGE1Q96RT6 745 aa12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 PIK3R4Q99570 1358 aa12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 PHACTR2O75167 634 aa12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 MCM5P33992 734 aa12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 IFIT1BQ5T764 474 aaKnown RBP12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.36
CCDC144B-208ENST00000618081 ARL1P40616 181 aaPredicted RBP12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 RNF187Q5TA31 235 aaPredicted RBP12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 CCDC144CPQ8IYA2 1237 aa12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 TMTC2Q8N394 836 aa12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 NSD2O96028 1365 aa12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 SMARCA5O60264 1052 aaPredicted RBP12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 STAT6P42226 847 aa12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 MICU3Q86XE3 530 aa12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.37
CCDC144B-208ENST00000618081 CNNM2Q9H8M5 875 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 EIF2AK4Q9P2K8 1649 aaKnown RBP12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 KRT13P13646 458 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 STX8Q9UNK0 236 aa12.76□□□□□ -0.37
CCDC144B-208ENST00000618081 TRMT1LQ7Z2T5 733 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms