RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 PTPRCP08575 1304 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 POTEB2H3BUK9 544 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 CAND2O75155 1236 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 RPSAP08865 295 aaKnown RBP8.55□□□□□ -1.04
PDE6A-205ENST00000617647 CORO7P57737 925 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 ARID5BQ14865 1188 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 LRRFIP1Q32MZ4 808 aaKnown RBP8.55□□□□□ -1.04
PDE6A-205ENST00000617647 TTC22Q5TAA0 569 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 EPC1Q9H2F5 836 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 ATP2C2O75185 946 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 F13A1P00488 732 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 RHOXF2BP0C7M4 288 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 KIF4BQ2VIQ3 1234 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 GPR161Q8N6U8 529 aaKnown RBP8.55□□□□□ -1.04
PDE6A-205ENST00000617647 SH3GL3Q99963 347 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 RHOXF2Q9BQY4 288 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 SH3BP1Q9Y3L3 701 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 EIF4G3O43432 1585 aaKnown RBP8.55□□□□□ -1.04
PDE6A-205ENST00000617647 TEX14Q8IWB6 1497 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 TROQ12816 1431 aaPredicted RBP8.55□□□□□ -1.04
PDE6A-205ENST00000617647 IRF6O14896 467 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 TUBB4AP04350 444 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 CYP2E1P05181 493 aaPredicted RBP8.55□□□□□ -1.04
PDE6A-205ENST00000617647 CCDC181Q5TID7 509 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 WWC2Q6AWC2 1192 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 SUGP1Q8IWZ8 645 aaKnown RBP8.55□□□□□ -1.04
PDE6A-205ENST00000617647 ARMC2Q8NEN0 867 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 MBD5Q9P267 1494 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 ADGBQ8N7X0 1667 aa8.55□□□□□ -1.04
PDE6A-205ENST00000617647 EFCAB8A8MWE9 144 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 LONRF2Q1L5Z9 754 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 CAMSAP2Q08AD1 1489 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 DISP1Q96F81 1524 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 E9PCH4 1651 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 TTC36A6NLP5 189 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 PPFIA4O75335 1185 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 SDSP20132 328 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 PAX7P23759 505 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 TEX11Q8IYF3 940 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 MICAL1Q8TDZ2 1067 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 CCDC114Q96M63 670 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 CCDC144AA2RUR9 1427 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
PDE6A-205ENST00000617647 CAGE1Q8TC20 777 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
PDE6A-205ENST00000617647 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.54□□□□□ -1.04
PDE6A-205ENST00000617647 DTNBO60941 627 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 HNRNPH1P31943 449 aaKnown RBP8.53□□□□□ -1.04
PDE6A-205ENST00000617647 CFAP100Q494V2 611 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 CC2D1AQ6P1N0 951 aaPredicted RBP8.53□□□□□ -1.04
PDE6A-205ENST00000617647 CCDC97Q96F63 343 aaPredicted RBP8.53□□□□□ -1.04
PDE6A-205ENST00000617647 INTS4Q96HW7 963 aaKnown RBP8.53□□□□□ -1.04
PDE6A-205ENST00000617647 FAM204AQ9H8W3 233 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 ANO10Q9NW15 660 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 MRFAP1Q9Y605 127 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 GPRASP1Q5JY77 1395 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 PDCP20941 246 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 ANAPC15P60006 121 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 STX1AQ16623 288 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 SLC4A10Q6U841 1118 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 IQCA1Q86XH1 822 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 C16orf71Q8IYS4 520 aaPredicted RBP8.53□□□□□ -1.04
PDE6A-205ENST00000617647 ZNF521Q96K83 1311 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 SYT1P21579 422 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 E2F5Q15329 346 aa8.53□□□□□ -1.04
PDE6A-205ENST00000617647 SCAND2PQ9GZW5 306 aaPredicted RBP8.53□□□□□ -1.04
PDE6A-205ENST00000617647 MAGI1Q96QZ7 1491 aaPredicted RBP8.53□□□□□ -1.04
PDE6A-205ENST00000617647 NDUFAB1O14561 156 aa8.52□□□□□ -1.04
PDE6A-205ENST00000617647 CAVIN2O95810 425 aa8.52□□□□□ -1.04
PDE6A-205ENST00000617647 GJB2P29033 226 aa8.52□□□□□ -1.04
PDE6A-205ENST00000617647 MAP9Q49MG5 647 aa8.52□□□□□ -1.04
PDE6A-205ENST00000617647 AOPEPQ8N6M6 819 aa8.52□□□□□ -1.04
PDE6A-205ENST00000617647 FAM76AQ8TAV0 307 aa8.52□□□□□ -1.04
PDE6A-205ENST00000617647 GOLGA6L10A6NI86 522 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 H2AFXP16104 143 aaPredicted RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 ETF1P62495 437 aaKnown RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 ENOX2Q16206 610 aaKnown RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 FOXR1Q6PIV2 292 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 TRMT2AQ8IZ69 625 aaKnown RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 JMYQ8N9B5 988 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 ZBTB40Q9NUA8 1239 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 PRG4Q92954 1404 aaPredicted RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 INSRP06213 1382 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 ZEB2O60315 1214 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 WDHD1O75717 1129 aaPredicted RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 CCDC144BQ3MJ40 725 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 SWT1Q5T5J6 900 aaKnown RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 CCDC144CPQ8IYA2 1237 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 BCAS4Q8TDM0 211 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 UTP14AQ9BVJ6 771 aaKnown RBP8.52□□□□□ -1.05
PDE6A-205ENST00000617647 PARD6BQ9BYG5 372 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 ERBINQ96RT1 1412 aa8.52□□□□□ -1.05
PDE6A-205ENST00000617647 CHUKO15111 745 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 HSPA4P34932 840 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 ACTN3Q08043 901 aaPredicted RBP8.51□□□□□ -1.05
PDE6A-205ENST00000617647 PPP1R13BQ96KQ4 1090 aa8.51□□□□□ -1.05
PDE6A-205ENST00000617647 API5Q9BZZ5 524 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms