RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
COL4A2-210ENST00000617564 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
COL4A2-210ENST00000617564 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL4A2-210ENST00000617564 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL4A2-210ENST00000617564 LAMB4A4D0S4 1761 aa16■□□□□ 0.15
COL4A2-210ENST00000617564 MCM10Q7L590 875 aa16■□□□□ 0.15
COL4A2-210ENST00000617564 RTKN2Q8IZC4 609 aa16■□□□□ 0.15
COL4A2-210ENST00000617564 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
COL4A2-210ENST00000617564 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
COL4A2-210ENST00000617564 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
COL4A2-210ENST00000617564 ZNF541Q9H0D2 1346 aa15.98■□□□□ 0.15
COL4A2-210ENST00000617564 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
COL4A2-210ENST00000617564 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
COL4A2-210ENST00000617564 SNED1Q8TER0 1413 aa15.97■□□□□ 0.15
COL4A2-210ENST00000617564 PPP2R1AP30153 589 aa15.97■□□□□ 0.15
COL4A2-210ENST00000617564 ALDH1B1P30837 517 aa15.97■□□□□ 0.15
COL4A2-210ENST00000617564 ZNF277Q9NRM2 450 aaPredicted RBP15.97■□□□□ 0.15
COL4A2-210ENST00000617564 TLL2Q9Y6L7 1015 aa15.97■□□□□ 0.15
COL4A2-210ENST00000617564 IBTKQ9P2D0 1353 aaPredicted RBP15.97■□□□□ 0.15
COL4A2-210ENST00000617564 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
COL4A2-210ENST00000617564 IARSP41252 1262 aaKnown RBP15.96■□□□□ 0.15
COL4A2-210ENST00000617564 BRPF1P55201 1214 aaPredicted RBP15.96■□□□□ 0.15
COL4A2-210ENST00000617564 FMR1Q06787 632 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL4A2-210ENST00000617564 DCTN1Q14203 1278 aa15.96■□□□□ 0.15
COL4A2-210ENST00000617564 TAF7Q15545 349 aaPredicted RBP15.96■□□□□ 0.15
COL4A2-210ENST00000617564 PNISRQ8TF01 805 aaKnown RBP15.96■□□□□ 0.15
COL4A2-210ENST00000617564 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
COL4A2-210ENST00000617564 FZD9O00144 591 aa15.95■□□□□ 0.14
COL4A2-210ENST00000617564 GTF2E1P29083 439 aaPredicted RBP15.95■□□□□ 0.14
COL4A2-210ENST00000617564 CRY2Q49AN0 593 aa15.95■□□□□ 0.14
COL4A2-210ENST00000617564 HABP4Q5JVS0 413 aaKnown RBP15.95■□□□□ 0.14
COL4A2-210ENST00000617564 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
COL4A2-210ENST00000617564 PSMD1Q99460 953 aa15.95■□□□□ 0.14
COL4A2-210ENST00000617564 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
COL4A2-210ENST00000617564 HLFQ16534 295 aa15.94■□□□□ 0.14
COL4A2-210ENST00000617564 ABCC12Q96J65 1359 aa15.94■□□□□ 0.14
COL4A2-210ENST00000617564 KDM3BQ7LBC6 1761 aa15.94■□□□□ 0.14
COL4A2-210ENST00000617564 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 NEFMP07197 916 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 GRIPAP1Q4V328 841 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 CST9Q5W186 159 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 GPC2Q8N158 579 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 SYNE4Q8N205 404 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 MAP3K15Q6ZN16 1313 aa15.93■□□□□ 0.14
COL4A2-210ENST00000617564 CIAPIN1Q6FI81 312 aa15.92■□□□□ 0.14
COL4A2-210ENST00000617564 JDP2Q8WYK2 163 aa15.92■□□□□ 0.14
COL4A2-210ENST00000617564 TRPM7Q96QT4 1865 aa15.91■□□□□ 0.14
COL4A2-210ENST00000617564 HOXA10P31260 410 aaPredicted RBP15.91■□□□□ 0.14
COL4A2-210ENST00000617564 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
COL4A2-210ENST00000617564 KIF6Q6ZMV9 814 aa15.91■□□□□ 0.14
COL4A2-210ENST00000617564 EIF6P56537 245 aaKnown RBP15.9■□□□□ 0.14
COL4A2-210ENST00000617564 RPGRQ92834 1020 aaKnown RBP15.9■□□□□ 0.14
COL4A2-210ENST00000617564 ERBB4Q15303 1308 aa15.9■□□□□ 0.14
COL4A2-210ENST00000617564 NUP98P52948 1817 aa15.89■□□□□ 0.13
COL4A2-210ENST00000617564 TRAF5O00463 557 aa15.89■□□□□ 0.13
COL4A2-210ENST00000617564 SAPCD2Q86UD0 394 aa15.89■□□□□ 0.13
COL4A2-210ENST00000617564 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
COL4A2-210ENST00000617564 MIS18AQ9NYP9 233 aa15.89■□□□□ 0.13
COL4A2-210ENST00000617564 DLG5Q8TDM6 1919 aa15.88■□□□□ 0.13
COL4A2-210ENST00000617564 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
COL4A2-210ENST00000617564 EIF4A1P60842 406 aaKnown RBP15.88■□□□□ 0.13
COL4A2-210ENST00000617564 CRAMP1Q96RY5 1269 aa15.88■□□□□ 0.13
COL4A2-210ENST00000617564 UBN2Q6ZU65 1347 aa15.88■□□□□ 0.13
COL4A2-210ENST00000617564 COL4A5P29400 1685 aa15.87■□□□□ 0.13
COL4A2-210ENST00000617564 NFE2L2Q16236 605 aa15.87■□□□□ 0.13
COL4A2-210ENST00000617564 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
COL4A2-210ENST00000617564 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
COL4A2-210ENST00000617564 HHIPL1Q96JK4 782 aa15.87■□□□□ 0.13
COL4A2-210ENST00000617564 NTSR2O95665 410 aa15.86■□□□□ 0.13
COL4A2-210ENST00000617564 PARP10Q53GL7 1025 aa15.86■□□□□ 0.13
COL4A2-210ENST00000617564 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
COL4A2-210ENST00000617564 ZNF34Q8IZ26 560 aa15.86■□□□□ 0.13
COL4A2-210ENST00000617564 LARGE2Q8N3Y3 721 aa15.86■□□□□ 0.13
COL4A2-210ENST00000617564 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
COL4A2-210ENST00000617564 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
COL4A2-210ENST00000617564 ZBTB3Q9H5J0 574 aa15.86■□□□□ 0.13
COL4A2-210ENST00000617564 RRP7AQ9Y3A4 280 aaKnown RBP15.86■□□□□ 0.13
COL4A2-210ENST00000617564 PPEF1O14829 653 aaPredicted RBP15.85■□□□□ 0.13
COL4A2-210ENST00000617564 MYL6BP14649 208 aa15.85■□□□□ 0.13
COL4A2-210ENST00000617564 GPTP24298 496 aa15.85■□□□□ 0.13
COL4A2-210ENST00000617564 SUSD4Q5VX71 490 aa15.85■□□□□ 0.13
COL4A2-210ENST00000617564 PPP1R42Q7Z4L9 355 aa15.85■□□□□ 0.13
COL4A2-210ENST00000617564 PNNQ9H307 717 aaKnown RBP15.85■□□□□ 0.13
COL4A2-210ENST00000617564 GJA3Q9Y6H8 435 aa15.85■□□□□ 0.13
COL4A2-210ENST00000617564 DLL1O00548 723 aa15.84■□□□□ 0.13
COL4A2-210ENST00000617564 CELF2O95319 508 aaKnown RBP15.84■□□□□ 0.13
COL4A2-210ENST00000617564 SCNN1DP51172 638 aa15.84■□□□□ 0.13
COL4A2-210ENST00000617564 NOGQ13253 232 aa15.84■□□□□ 0.13
COL4A2-210ENST00000617564 NIM1KQ8IY84 436 aa15.84■□□□□ 0.13
COL4A2-210ENST00000617564 VPS33BQ9H267 617 aa15.84■□□□□ 0.13
COL4A2-210ENST00000617564 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
COL4A2-210ENST00000617564 FXR1P51114 621 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL4A2-210ENST00000617564 USP50Q70EL3 339 aaPredicted RBP15.83■□□□□ 0.12
COL4A2-210ENST00000617564 TMX4Q9H1E5 349 aaPredicted RBP15.83■□□□□ 0.12
COL4A2-210ENST00000617564 CTU1Q7Z7A3 348 aaKnown RBP15.82■□□□□ 0.12
COL4A2-210ENST00000617564 NLRP3Q96P20 1036 aa15.82■□□□□ 0.12
COL4A2-210ENST00000617564 ZIC5Q96T25 663 aa15.82■□□□□ 0.12
COL4A2-210ENST00000617564 THUMPD2Q9BTF0 503 aaKnown RBP15.82■□□□□ 0.12
COL4A2-210ENST00000617564 SAGE1Q9NXZ1 904 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms