RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 CHPF2Q9P2E5 772 aa29.01■■■□□ 2.23
NEDD4L-237ENST00000617539 HOXA10P31260 410 aaPredicted RBP29■■■□□ 2.23
NEDD4L-237ENST00000617539 AIMP1Q12904 312 aaKnown RBP29■■■□□ 2.23
NEDD4L-237ENST00000617539 CCDC184Q52MB2 194 aa29■■■□□ 2.23
NEDD4L-237ENST00000617539 PARP10Q53GL7 1025 aa29■■■□□ 2.23
NEDD4L-237ENST00000617539 ZNF853P0CG23 659 aa28.99■■■□□ 2.23
NEDD4L-237ENST00000617539 DPY19L2Q6NUT2 758 aa28.99■■■□□ 2.23
NEDD4L-237ENST00000617539 PPP1R42Q7Z4L9 355 aa28.99■■■□□ 2.23
NEDD4L-237ENST00000617539 SLC51AQ86UW1 340 aa28.99■■■□□ 2.23
NEDD4L-237ENST00000617539 MBIPQ9NS73 344 aa28.99■■■□□ 2.23
NEDD4L-237ENST00000617539 HOXB7P09629 217 aa28.98■■■□□ 2.23
NEDD4L-237ENST00000617539 HDGFL1Q5TGJ6 251 aa28.98■■■□□ 2.23
NEDD4L-237ENST00000617539 ZNF277Q9NRM2 450 aaPredicted RBP28.98■■■□□ 2.23
NEDD4L-237ENST00000617539 RTKN2Q8IZC4 609 aa28.97■■■□□ 2.23
NEDD4L-237ENST00000617539 DNAJC5GQ8N7S2 189 aa28.97■■■□□ 2.23
NEDD4L-237ENST00000617539 RPGRQ92834 1020 aaKnown RBP28.97■■■□□ 2.23
NEDD4L-237ENST00000617539 DDNO94850 711 aaPredicted RBP28.96■■■□□ 2.23
NEDD4L-237ENST00000617539 SMC1BQ8NDV3 1235 aa28.96■■■□□ 2.23
NEDD4L-237ENST00000617539 UTP14AQ9BVJ6 771 aaKnown RBP28.96■■■□□ 2.23
NEDD4L-237ENST00000617539 HTRA3P83110 453 aa28.95■■■□□ 2.22
NEDD4L-237ENST00000617539 NLRP10Q86W26 655 aa28.95■■■□□ 2.22
NEDD4L-237ENST00000617539 COL4A5P29400 1685 aa28.95■■■□□ 2.22
NEDD4L-237ENST00000617539 SLC10A5Q5PT55 438 aa28.94■■■□□ 2.22
NEDD4L-237ENST00000617539 DUSP27Q5VZP5 1158 aa28.94■■■□□ 2.22
NEDD4L-237ENST00000617539 TCIRG1Q13488 830 aa28.93■■■□□ 2.22
NEDD4L-237ENST00000617539 SYNE4Q8N205 404 aa28.93■■■□□ 2.22
NEDD4L-237ENST00000617539 CRAMP1Q96RY5 1269 aa28.93■■■□□ 2.22
NEDD4L-237ENST00000617539 DDX60Q8IY21 1712 aaKnown RBP28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 ZEB1P37275 1124 aaPredicted RBP28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 HSP90AB3PQ58FF7 597 aa28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 PSMD1Q99460 953 aa28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 IFT57Q9NWB7 429 aa28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 DBF4Q9UBU7 674 aaPredicted RBP28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 RNF123Q5XPI4 1314 aa28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 ZNF541Q9H0D2 1346 aa28.92■■■□□ 2.22
NEDD4L-237ENST00000617539 RBM17Q96I25 401 aaKnown RBP28.91■■■□□ 2.22
NEDD4L-237ENST00000617539 SCN4AP35499 1836 aa28.91■■■□□ 2.22
NEDD4L-237ENST00000617539 IARSP41252 1262 aaKnown RBP28.9■■■□□ 2.22
NEDD4L-237ENST00000617539 NLRP3Q96P20 1036 aa28.9■■■□□ 2.22
NEDD4L-237ENST00000617539 TAF1P21675 1872 aa28.89■■■□□ 2.22
NEDD4L-237ENST00000617539 PPEF1O14829 653 aaPredicted RBP28.89■■■□□ 2.22
NEDD4L-237ENST00000617539 PLBD2Q8NHP8 589 aa28.89■■■□□ 2.22
NEDD4L-237ENST00000617539 GNAI1P63096 354 aa28.88■■■□□ 2.21
NEDD4L-237ENST00000617539 CC2D2BQ6DHV5 1058 aa28.88■■■□□ 2.21
NEDD4L-237ENST00000617539 ZNF428Q96B54 188 aa28.88■■■□□ 2.21
NEDD4L-237ENST00000617539 L3MBTL3Q96JM7 780 aaPredicted RBP28.88■■■□□ 2.21
NEDD4L-237ENST00000617539 POTEIP0CG38 1075 aa28.87■■■□□ 2.21
NEDD4L-237ENST00000617539 POTEJP0CG39 1038 aa28.87■■■□□ 2.21
NEDD4L-237ENST00000617539 HCLS1P14317 486 aaPredicted RBP28.87■■■□□ 2.21
NEDD4L-237ENST00000617539 ABCC4O15439 1325 aa28.87■■■□□ 2.21
NEDD4L-237ENST00000617539 FZD9O00144 591 aa28.86■■■□□ 2.21
NEDD4L-237ENST00000617539 TCERG1O14776 1098 aaKnown RBP28.86■■■□□ 2.21
NEDD4L-237ENST00000617539 CALD1Q05682 793 aaKnown RBP28.86■■■□□ 2.21
NEDD4L-237ENST00000617539 ANKRD13DQ6ZTN6 518 aa28.86■■■□□ 2.21
NEDD4L-237ENST00000617539 HYPKQ9NX55 129 aa28.86■■■□□ 2.21
NEDD4L-237ENST00000617539 TRMT112Q9UI30 125 aaKnown RBP28.86■■■□□ 2.21
NEDD4L-237ENST00000617539 ISCA1Q9BUE6 129 aa28.85■■■□□ 2.21
NEDD4L-237ENST00000617539 SH3TC1Q8TE82 1336 aa28.85■■■□□ 2.21
NEDD4L-237ENST00000617539 ELL2O00472 640 aaPredicted RBP28.84■■■□□ 2.21
NEDD4L-237ENST00000617539 C8orf58Q8NAV2 365 aa28.84■■■□□ 2.21
NEDD4L-237ENST00000617539 ADAMTSL1Q8N6G6 1762 aa28.83■■■□□ 2.21
NEDD4L-237ENST00000617539 ATP5J2-PTCD1G3V325 749 aa28.82■■■□□ 2.2
NEDD4L-237ENST00000617539 ATP6V0A2Q9Y487 856 aa28.82■■■□□ 2.2
NEDD4L-237ENST00000617539 PCNTO95613 3336 aa28.81■■■□□ 2.2
NEDD4L-237ENST00000617539 COL4A1P02462 1669 aa28.81■■■□□ 2.2
NEDD4L-237ENST00000617539 ZNF316A6NFI3 1004 aaPredicted RBP28.81■■■□□ 2.2
NEDD4L-237ENST00000617539 GRIPAP1Q4V328 841 aa28.81■■■□□ 2.2
NEDD4L-237ENST00000617539 TAF1DQ9H5J8 278 aaPredicted RBP28.81■■■□□ 2.2
NEDD4L-237ENST00000617539 PHAXQ9H814 394 aaKnown RBP28.81■■■□□ 2.2
NEDD4L-237ENST00000617539 LRRC37AA6NMS7 1700 aa28.8■■■□□ 2.2
NEDD4L-237ENST00000617539 IQCA1LA6NCM1 817 aa28.8■■■□□ 2.2
NEDD4L-237ENST00000617539 KLRG1Q96E93 195 aa28.8■■■□□ 2.2
NEDD4L-237ENST00000617539 LTBP1Q14766 1721 aa28.8■■■□□ 2.2
NEDD4L-237ENST00000617539 CHADLQ6NUI6 762 aa28.79■■■□□ 2.2
NEDD4L-237ENST00000617539 FAM89AQ96GI7 184 aa28.79■■■□□ 2.2
NEDD4L-237ENST00000617539 TSPYL6Q8N831 410 aa28.78■■■□□ 2.2
NEDD4L-237ENST00000617539 JDP2Q8WYK2 163 aa28.78■■■□□ 2.2
NEDD4L-237ENST00000617539 CCDC27Q2M243 656 aa28.77■■■□□ 2.2
NEDD4L-237ENST00000617539 GPC2Q8N158 579 aa28.77■■■□□ 2.2
NEDD4L-237ENST00000617539 TSR2Q969E8 191 aaKnown RBP28.77■■■□□ 2.2
NEDD4L-237ENST00000617539 DUOX1Q9NRD9 1551 aa28.76■■■□□ 2.19
NEDD4L-237ENST00000617539 BBOX1O75936 387 aa28.76■■■□□ 2.19
NEDD4L-237ENST00000617539 TRIM28Q13263 835 aaKnown RBP28.76■■■□□ 2.19
NEDD4L-237ENST00000617539 LARGE2Q8N3Y3 721 aa28.76■■■□□ 2.19
NEDD4L-237ENST00000617539 GRAPQ13588 217 aa28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 DDX46Q7L014 1031 aaKnown RBP28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 WWC1Q8IX03 1113 aa28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 SP8Q8IXZ3 490 aa28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 GRAPLQ8TC17 118 aaPredicted RBP28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 RTFDC1Q9BY42 306 aaPredicted RBP28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 MRS2Q9HD23 443 aa28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 HACL1Q9UJ83 578 aa28.75■■■□□ 2.19
NEDD4L-237ENST00000617539 GOLGA2Q08379 1002 aa28.74■■■□□ 2.19
NEDD4L-237ENST00000617539 LDHDQ86WU2 507 aa28.74■■■□□ 2.19
NEDD4L-237ENST00000617539 JMYQ8N9B5 988 aa28.74■■■□□ 2.19
NEDD4L-237ENST00000617539 EPHX2P34913 555 aa28.73■■■□□ 2.19
NEDD4L-237ENST00000617539 AOC3Q16853 763 aa28.73■■■□□ 2.19
NEDD4L-237ENST00000617539 RTL5Q5HYW3 569 aaPredicted RBP28.73■■■□□ 2.19
NEDD4L-237ENST00000617539 RIC3Q7Z5B4 369 aa28.73■■■□□ 2.19
NEDD4L-237ENST00000617539 PPIP5K2O43314 1243 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms