RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 PKNOX2Q96KN3 472 aa19.8■□□□□ 0.76
DDB2-212ENST00000617022 DCTPP1Q9H773 170 aa19.8■□□□□ 0.76
DDB2-212ENST00000617022 C4BP0C0L5 1744 aa19.79■□□□□ 0.76
DDB2-212ENST00000617022 BICC1Q9H694 974 aaKnown RBP19.79■□□□□ 0.76
DDB2-212ENST00000617022 NUP98P52948 1817 aa19.79■□□□□ 0.76
DDB2-212ENST00000617022 RPS6KA4O75676 772 aa19.78■□□□□ 0.76
DDB2-212ENST00000617022 APBA3O96018 575 aa19.78■□□□□ 0.76
DDB2-212ENST00000617022 HSP90AB3PQ58FF7 597 aa19.78■□□□□ 0.76
DDB2-212ENST00000617022 HDAC5Q9UQL6 1122 aa19.78■□□□□ 0.76
DDB2-212ENST00000617022 SRGAP3O43295 1099 aa19.78■□□□□ 0.76
DDB2-212ENST00000617022 CASP7P55210 303 aa19.78■□□□□ 0.76
DDB2-212ENST00000617022 AMIGO3Q86WK7 504 aa19.78■□□□□ 0.76
DDB2-212ENST00000617022 ANKRD36CQ5JPF3 1778 aa19.77■□□□□ 0.76
DDB2-212ENST00000617022 H7C1W4 665 aa19.77■□□□□ 0.76
DDB2-212ENST00000617022 TRIM28Q13263 835 aaKnown RBP19.77■□□□□ 0.76
DDB2-212ENST00000617022 TXNRD1Q16881 649 aa19.77■□□□□ 0.76
DDB2-212ENST00000617022 SLC27A3Q5K4L6 730 aa19.77■□□□□ 0.76
DDB2-212ENST00000617022 PROM2Q8N271 834 aa19.77■□□□□ 0.76
DDB2-212ENST00000617022 NUCB1Q02818 461 aa19.77■□□□□ 0.75
DDB2-212ENST00000617022 EPHA10Q5JZY3 1008 aa19.77■□□□□ 0.75
DDB2-212ENST00000617022 ANKRD45Q5TZF3 282 aa19.77■□□□□ 0.75
DDB2-212ENST00000617022 SSH3Q8TE77 659 aa19.77■□□□□ 0.75
DDB2-212ENST00000617022 AK7Q96M32 723 aa19.77■□□□□ 0.75
DDB2-212ENST00000617022 RTCBQ9Y3I0 505 aaKnown RBP19.77■□□□□ 0.75
DDB2-212ENST00000617022 APBB1O00213 710 aa19.76■□□□□ 0.75
DDB2-212ENST00000617022 NLRP10Q86W26 655 aa19.76■□□□□ 0.75
DDB2-212ENST00000617022 MTX1Q13505 466 aa19.76■□□□□ 0.75
DDB2-212ENST00000617022 POLA2Q14181 598 aa19.76■□□□□ 0.75
DDB2-212ENST00000617022 LNPKQ9C0E8 428 aa19.76■□□□□ 0.75
DDB2-212ENST00000617022 EXOC6BQ9Y2D4 811 aa19.76■□□□□ 0.75
DDB2-212ENST00000617022 PHF14O94880 888 aa19.75■□□□□ 0.75
DDB2-212ENST00000617022 ZNF34Q8IZ26 560 aa19.75■□□□□ 0.75
DDB2-212ENST00000617022 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
DDB2-212ENST00000617022 TNS1Q9HBL0 1735 aaKnown RBP19.74■□□□□ 0.75
DDB2-212ENST00000617022 BCORQ6W2J9 1755 aa19.74■□□□□ 0.75
DDB2-212ENST00000617022 PLSCR1O15162 318 aa19.74■□□□□ 0.75
DDB2-212ENST00000617022 GLIPR1L2Q4G1C9 344 aa19.74■□□□□ 0.75
DDB2-212ENST00000617022 CHD1LQ86WJ1 897 aa19.74■□□□□ 0.75
DDB2-212ENST00000617022 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
DDB2-212ENST00000617022 DAXXQ9UER7 740 aaPredicted RBP19.74■□□□□ 0.75
DDB2-212ENST00000617022 SRP68Q9UHB9 627 aaKnown RBP19.73■□□□□ 0.75
DDB2-212ENST00000617022 ARHGEF1Q92888 912 aaKnown RBP19.73■□□□□ 0.75
DDB2-212ENST00000617022 PCCAP05165 728 aaPredicted RBP19.72■□□□□ 0.75
DDB2-212ENST00000617022 SYNE4Q8N205 404 aa19.72■□□□□ 0.75
DDB2-212ENST00000617022 ZBTB38Q8NAP3 1195 aaPredicted RBP19.72■□□□□ 0.75
DDB2-212ENST00000617022 ZNF652Q9Y2D9 606 aa19.72■□□□□ 0.75
DDB2-212ENST00000617022 USPL1Q5W0Q7 1092 aa19.71■□□□□ 0.75
DDB2-212ENST00000617022 NARFQ9UHQ1 456 aa19.71■□□□□ 0.75
DDB2-212ENST00000617022 NIP7Q9Y221 180 aaKnown RBP eCLIP19.71■□□□□ 0.75
DDB2-212ENST00000617022 SCN7AQ01118 1682 aa19.71■□□□□ 0.75
DDB2-212ENST00000617022 FAM177BA6PVY3 158 aa19.71■□□□□ 0.75
DDB2-212ENST00000617022 SMARCA5O60264 1052 aaPredicted RBP19.71■□□□□ 0.75
DDB2-212ENST00000617022 SURF6O75683 361 aaKnown RBP19.71■□□□□ 0.75
DDB2-212ENST00000617022 FOXO4P98177 505 aa19.71■□□□□ 0.75
DDB2-212ENST00000617022 RABL6Q3YEC7 729 aaPredicted RBP19.71■□□□□ 0.75
DDB2-212ENST00000617022 BCL2L12Q9HB09 334 aa19.71■□□□□ 0.75
DDB2-212ENST00000617022 TRMT112Q9UI30 125 aaKnown RBP19.71■□□□□ 0.75
DDB2-212ENST00000617022 TRAPPC3LQ5T215 181 aa19.7■□□□□ 0.74
DDB2-212ENST00000617022 PA2G4Q9UQ80 394 aaKnown RBP19.7■□□□□ 0.74
DDB2-212ENST00000617022 ZPR1O75312 459 aa19.7■□□□□ 0.74
DDB2-212ENST00000617022 SUSD4Q5VX71 490 aa19.7■□□□□ 0.74
DDB2-212ENST00000617022 LMBR1LQ6UX01 489 aa19.7■□□□□ 0.74
DDB2-212ENST00000617022 CLEC4GQ6UXB4 293 aa19.7■□□□□ 0.74
DDB2-212ENST00000617022 C4AP0C0L4 1744 aa19.69■□□□□ 0.74
DDB2-212ENST00000617022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.69■□□□□ 0.74
DDB2-212ENST00000617022 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
DDB2-212ENST00000617022 RFC4P35249 363 aa19.68■□□□□ 0.74
DDB2-212ENST00000617022 CHMP3Q9Y3E7 222 aa19.68■□□□□ 0.74
DDB2-212ENST00000617022 BICDL1Q6ZP65 573 aa19.68■□□□□ 0.74
DDB2-212ENST00000617022 KLHDC4Q8TBB5 520 aa19.68■□□□□ 0.74
DDB2-212ENST00000617022 PARP10Q53GL7 1025 aa19.67■□□□□ 0.74
DDB2-212ENST00000617022 TBC1D9BQ66K14 1250 aa19.67■□□□□ 0.74
DDB2-212ENST00000617022 CDHR2Q9BYE9 1310 aa19.67■□□□□ 0.74
DDB2-212ENST00000617022 USP42Q9H9J4 1324 aaKnown RBP19.67■□□□□ 0.74
DDB2-212ENST00000617022 C16orf71Q8IYS4 520 aaPredicted RBP19.67■□□□□ 0.74
DDB2-212ENST00000617022 LRRCC1Q9C099 1032 aa19.67■□□□□ 0.74
DDB2-212ENST00000617022 UTP14AQ9BVJ6 771 aaKnown RBP19.66■□□□□ 0.74
DDB2-212ENST00000617022 IRS4O14654 1257 aaPredicted RBP19.66■□□□□ 0.74
DDB2-212ENST00000617022 ADRA2BP18089 450 aa19.66■□□□□ 0.74
DDB2-212ENST00000617022 ZNF827Q17R98 1081 aa19.66■□□□□ 0.74
DDB2-212ENST00000617022 SSFA2P28290 1259 aa19.65■□□□□ 0.74
DDB2-212ENST00000617022 RFX5P48382 616 aaPredicted RBP19.65■□□□□ 0.74
DDB2-212ENST00000617022 EN1Q05925 392 aaPredicted RBP19.65■□□□□ 0.74
DDB2-212ENST00000617022 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
DDB2-212ENST00000617022 CCDC85AQ96PX6 553 aaPredicted RBP19.65■□□□□ 0.74
DDB2-212ENST00000617022 PLA2G12BQ9BX93 195 aa19.65■□□□□ 0.74
DDB2-212ENST00000617022 SIL1Q9H173 461 aa19.65■□□□□ 0.74
DDB2-212ENST00000617022 RGL2O15211 777 aa19.64■□□□□ 0.74
DDB2-212ENST00000617022 FRAT2O75474 233 aaPredicted RBP19.64■□□□□ 0.74
DDB2-212ENST00000617022 NTSR2O95665 410 aa19.64■□□□□ 0.74
DDB2-212ENST00000617022 OTUD7AQ8TE49 926 aaPredicted RBP19.64■□□□□ 0.74
DDB2-212ENST00000617022 SH3TC1Q8TE82 1336 aa19.64■□□□□ 0.73
DDB2-212ENST00000617022 RGPD3A6NKT7 1758 aaPredicted RBP19.64■□□□□ 0.73
DDB2-212ENST00000617022 RGPD4Q7Z3J3 1758 aa19.64■□□□□ 0.73
DDB2-212ENST00000617022 RAB11FIP3O75154 756 aa19.64■□□□□ 0.73
DDB2-212ENST00000617022 EZH2Q15910 746 aaKnown RBP19.64■□□□□ 0.73
DDB2-212ENST00000617022 NUTM1Q86Y26 1132 aa19.64■□□□□ 0.73
DDB2-212ENST00000617022 IL1RAPL2Q9NP60 686 aa19.64■□□□□ 0.73
DDB2-212ENST00000617022 SLC4A3P48751 1232 aa19.63■□□□□ 0.73
DDB2-212ENST00000617022 PTPN12Q05209 780 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms