RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SLIT1O75093 1534 aa18.45■□□□□ 0.54
GPN1-212ENST00000616939 CREB3L3Q68CJ9 461 aa18.45■□□□□ 0.54
GPN1-212ENST00000616939 LUZP1Q86V48 1076 aa18.45■□□□□ 0.54
GPN1-212ENST00000616939 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
GPN1-212ENST00000616939 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
GPN1-212ENST00000616939 TSPOAP1O95153 1857 aa18.45■□□□□ 0.54
GPN1-212ENST00000616939 TNNT1P13805 278 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 CDC37L1Q7L3B6 337 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 CLASRPQ8N2M8 674 aaKnown RBP18.44■□□□□ 0.54
GPN1-212ENST00000616939 MAP4K1Q92918 833 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 LARP6Q9BRS8 491 aaKnown RBP18.44■□□□□ 0.54
GPN1-212ENST00000616939 DDX41Q9UJV9 622 aaKnown RBP18.44■□□□□ 0.54
GPN1-212ENST00000616939 TPCN1Q9ULQ1 816 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 HDAC5Q9UQL6 1122 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 PLEKHG1Q9ULL1 1385 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 DNAAF4Q8WXU2 420 aa18.44■□□□□ 0.54
GPN1-212ENST00000616939 RBM8AQ9Y5S9 174 aaKnown RBP18.44■□□□□ 0.54
GPN1-212ENST00000616939 MORC2Q9Y6X9 1032 aaPredicted RBP18.44■□□□□ 0.54
GPN1-212ENST00000616939 RGPD8O14715 1765 aaPredicted RBP18.43■□□□□ 0.54
GPN1-212ENST00000616939 SPDYE4A6NLX3 237 aa18.43■□□□□ 0.54
GPN1-212ENST00000616939 AMPHP49418 695 aa18.43■□□□□ 0.54
GPN1-212ENST00000616939 CCDC112Q8NEF3 446 aa18.43■□□□□ 0.54
GPN1-212ENST00000616939 LEO1Q8WVC0 666 aaPredicted RBP18.43■□□□□ 0.54
GPN1-212ENST00000616939 SPATA32Q96LK8 384 aa18.43■□□□□ 0.54
GPN1-212ENST00000616939 TRIM5Q9C035 493 aa18.43■□□□□ 0.54
GPN1-212ENST00000616939 KCND1Q9NSA2 647 aa18.43■□□□□ 0.54
GPN1-212ENST00000616939 DACT1Q9NYF0 836 aa18.43■□□□□ 0.54
GPN1-212ENST00000616939 NPHP4O75161 1426 aaPredicted RBP18.43■□□□□ 0.54
GPN1-212ENST00000616939 FAM193AP78312 1265 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 RBM6P78332 1123 aaKnown RBP18.42■□□□□ 0.54
GPN1-212ENST00000616939 TSGA10IPQ3SY00 556 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 MRFAP1L1Q96HT8 127 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 PHAXQ9H814 394 aaKnown RBP18.42■□□□□ 0.54
GPN1-212ENST00000616939 MRC1P22897 1456 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 MED23Q9ULK4 1368 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 GOLGA6L4A6NEF3 574 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 NECTIN2Q92692 538 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 HMG20BQ9P0W2 317 aa18.42■□□□□ 0.54
GPN1-212ENST00000616939 SLC27A2O14975 620 aa18.41■□□□□ 0.54
GPN1-212ENST00000616939 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
GPN1-212ENST00000616939 NBPF7P0C2Y1 421 aaPredicted RBP18.41■□□□□ 0.54
GPN1-212ENST00000616939 RNF20Q5VTR2 975 aa18.41■□□□□ 0.54
GPN1-212ENST00000616939 DRC7Q8IY82 874 aa18.41■□□□□ 0.54
GPN1-212ENST00000616939 NECAB1Q8N987 351 aa18.41■□□□□ 0.54
GPN1-212ENST00000616939 RPS6KB1P23443 525 aa18.4■□□□□ 0.54
GPN1-212ENST00000616939 LRMPQ12912 555 aa18.4■□□□□ 0.54
GPN1-212ENST00000616939 SLFNL1Q499Z3 407 aa18.4■□□□□ 0.54
GPN1-212ENST00000616939 TPRNQ4KMQ1 711 aa18.4■□□□□ 0.54
GPN1-212ENST00000616939 C16orf45Q96MC5 204 aaPredicted RBP18.4■□□□□ 0.54
GPN1-212ENST00000616939 ADCY9O60503 1353 aa18.4■□□□□ 0.54
GPN1-212ENST00000616939 TNRQ92752 1358 aa18.4■□□□□ 0.54
GPN1-212ENST00000616939 CTAGE5O15320 804 aa18.39■□□□□ 0.54
GPN1-212ENST00000616939 ZNF165P49910 485 aa18.39■□□□□ 0.54
GPN1-212ENST00000616939 OS9Q13438 667 aaPredicted RBP18.39■□□□□ 0.54
GPN1-212ENST00000616939 BLOC1S2Q6QNY1 142 aa18.39■□□□□ 0.54
GPN1-212ENST00000616939 ZNF397Q8NF99 534 aaPredicted RBP18.39■□□□□ 0.54
GPN1-212ENST00000616939 CLIP2Q9UDT6 1046 aa18.39■□□□□ 0.54
GPN1-212ENST00000616939 CREBRFQ8IUR6 639 aa18.39■□□□□ 0.53
GPN1-212ENST00000616939 CKAP2LQ8IYA6 745 aa18.39■□□□□ 0.53
GPN1-212ENST00000616939 CACTINQ8WUQ7 758 aaKnown RBP18.39■□□□□ 0.53
GPN1-212ENST00000616939 FAM53CQ9NYF3 392 aa18.39■□□□□ 0.53
GPN1-212ENST00000616939 LTN1O94822 1766 aa18.38■□□□□ 0.53
GPN1-212ENST00000616939 IFIT2P09913 472 aaKnown RBP18.38■□□□□ 0.53
GPN1-212ENST00000616939 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
GPN1-212ENST00000616939 RESTQ13127 1097 aa18.38■□□□□ 0.53
GPN1-212ENST00000616939 IQCB1Q15051 598 aa18.38■□□□□ 0.53
GPN1-212ENST00000616939 CAMK4Q16566 473 aa18.38■□□□□ 0.53
GPN1-212ENST00000616939 TPD52L1Q16890 204 aaPredicted RBP18.38■□□□□ 0.53
GPN1-212ENST00000616939 CEP135Q66GS9 1140 aa18.38■□□□□ 0.53
GPN1-212ENST00000616939 NRBP1Q9UHY1 535 aa18.38■□□□□ 0.53
GPN1-212ENST00000616939 RFX7Q2KHR2 1363 aa18.38■□□□□ 0.53
GPN1-212ENST00000616939 KIF2AO00139 706 aaPredicted RBP18.37■□□□□ 0.53
GPN1-212ENST00000616939 HOXC9P31274 260 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 NMIQ13287 307 aaPredicted RBP18.37■□□□□ 0.53
GPN1-212ENST00000616939 PLPPR3Q6T4P5 718 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 NYAP1Q6ZVC0 841 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 KIF18AQ8NI77 898 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
GPN1-212ENST00000616939 ANKARQ7Z5J8 1434 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
GPN1-212ENST00000616939 FERMT3Q86UX7 667 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 PGBD1Q96JS3 809 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 PODXL2Q9NZ53 605 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
GPN1-212ENST00000616939 KRT32Q14532 448 aa18.36■□□□□ 0.53
GPN1-212ENST00000616939 LARP1Q6PKG0 1096 aaKnown RBP18.36■□□□□ 0.53
GPN1-212ENST00000616939 LRRC8AQ8IWT6 810 aa18.36■□□□□ 0.53
GPN1-212ENST00000616939 KCNJ4P48050 445 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 STX1AQ16623 288 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 CCDC144BQ3MJ40 725 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 CCDC144CPQ8IYA2 1237 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 ERO1AQ96HE7 468 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 DNAJC25Q9H1X3 360 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 PHRF1Q9P1Y6 1649 aaKnown RBP18.35■□□□□ 0.53
GPN1-212ENST00000616939 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 NR1I2O75469 434 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 KRT222Q8N1A0 295 aa18.35■□□□□ 0.53
GPN1-212ENST00000616939 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms