RNA–Protein interactions for RNA: ENST00000616789.4

UPK1A-203, Transcript of uroplakin 1A, humanhuman

TSL 5 BASIC

Gene UPK1A, Length 1,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-203ENST00000616789 C3orf67Q6ZVT6 689 aa17.7■□□□□ 0.42
UPK1A-203ENST00000616789 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
UPK1A-203ENST00000616789 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
UPK1A-203ENST00000616789 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
UPK1A-203ENST00000616789 MIER1Q8N108 512 aa17.69■□□□□ 0.42
UPK1A-203ENST00000616789 CACNA1FO60840 1977 aa17.68■□□□□ 0.42
UPK1A-203ENST00000616789 NFKBIEO00221 500 aa17.68■□□□□ 0.42
UPK1A-203ENST00000616789 NPR1P16066 1061 aa17.68■□□□□ 0.42
UPK1A-203ENST00000616789 HOXA10P31260 410 aaPredicted RBP17.68■□□□□ 0.42
UPK1A-203ENST00000616789 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
UPK1A-203ENST00000616789 G2E3Q7L622 706 aa17.68■□□□□ 0.42
UPK1A-203ENST00000616789 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
UPK1A-203ENST00000616789 UTP14AQ9BVJ6 771 aaKnown RBP17.68■□□□□ 0.42
UPK1A-203ENST00000616789 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
UPK1A-203ENST00000616789 NPHP1O15259 732 aa17.67■□□□□ 0.42
UPK1A-203ENST00000616789 PRPF40BQ6NWY9 871 aaKnown RBP17.67■□□□□ 0.42
UPK1A-203ENST00000616789 CNKSR1Q969H4 720 aa17.67■□□□□ 0.42
UPK1A-203ENST00000616789 SNED1Q8TER0 1413 aa17.67■□□□□ 0.42
UPK1A-203ENST00000616789 LAMB2P55268 1798 aa17.67■□□□□ 0.42
UPK1A-203ENST00000616789 CCDC88AQ3V6T2 1871 aa17.67■□□□□ 0.42
UPK1A-203ENST00000616789 C21orf2O43822 256 aa17.66■□□□□ 0.42
UPK1A-203ENST00000616789 GOLGA2Q08379 1002 aa17.66■□□□□ 0.42
UPK1A-203ENST00000616789 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
UPK1A-203ENST00000616789 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
UPK1A-203ENST00000616789 GTF2E1P29083 439 aaPredicted RBP17.66■□□□□ 0.42
UPK1A-203ENST00000616789 RASSF7Q02833 373 aa17.66■□□□□ 0.42
UPK1A-203ENST00000616789 DDX60Q8IY21 1712 aaKnown RBP17.66■□□□□ 0.42
UPK1A-203ENST00000616789 CHMP4AQ9BY43 222 aa17.66■□□□□ 0.42
UPK1A-203ENST00000616789 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
UPK1A-203ENST00000616789 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
UPK1A-203ENST00000616789 TRMT2AQ8IZ69 625 aaKnown RBP17.65■□□□□ 0.42
UPK1A-203ENST00000616789 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
UPK1A-203ENST00000616789 SLC51AQ86UW1 340 aa17.64■□□□□ 0.41
UPK1A-203ENST00000616789 ZNF428Q96B54 188 aa17.64■□□□□ 0.41
UPK1A-203ENST00000616789 METTL22Q9BUU2 404 aaPredicted RBP17.64■□□□□ 0.41
UPK1A-203ENST00000616789 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
UPK1A-203ENST00000616789 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
UPK1A-203ENST00000616789 SLFN5Q08AF3 891 aa17.63■□□□□ 0.41
UPK1A-203ENST00000616789 KSR2Q6VAB6 950 aa17.63■□□□□ 0.41
UPK1A-203ENST00000616789 RIC3Q7Z5B4 369 aa17.63■□□□□ 0.41
UPK1A-203ENST00000616789 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
UPK1A-203ENST00000616789 FAM89AQ96GI7 184 aa17.63■□□□□ 0.41
UPK1A-203ENST00000616789 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
UPK1A-203ENST00000616789 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 LTBP3Q9NS15 1303 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 DICER1Q9UPY3 1922 aaKnown RBP17.62■□□□□ 0.41
UPK1A-203ENST00000616789 IGKV5-2P06315 115 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 HCLS1P14317 486 aaPredicted RBP17.62■□□□□ 0.41
UPK1A-203ENST00000616789 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 NLRP3Q96P20 1036 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 CRAMP1Q96RY5 1269 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
UPK1A-203ENST00000616789 TAF1P21675 1872 aa17.62■□□□□ 0.41
UPK1A-203ENST00000616789 LMNB1P20700 586 aa17.61■□□□□ 0.41
UPK1A-203ENST00000616789 MYD88Q99836 296 aa17.61■□□□□ 0.41
UPK1A-203ENST00000616789 MAP3K2Q9Y2U5 619 aa17.61■□□□□ 0.41
UPK1A-203ENST00000616789 COL4A1P02462 1669 aa17.6■□□□□ 0.41
UPK1A-203ENST00000616789 FLIIQ13045 1269 aa17.6■□□□□ 0.41
UPK1A-203ENST00000616789 CCDC191Q8NCU4 936 aa17.6■□□□□ 0.41
UPK1A-203ENST00000616789 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
UPK1A-203ENST00000616789 E9PSI1 815 aa17.59■□□□□ 0.41
UPK1A-203ENST00000616789 RNF181Q9P0P0 153 aa17.59■□□□□ 0.41
UPK1A-203ENST00000616789 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
UPK1A-203ENST00000616789 SF3B3Q15393 1217 aaKnown RBP17.58■□□□□ 0.4
UPK1A-203ENST00000616789 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.4
UPK1A-203ENST00000616789 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
UPK1A-203ENST00000616789 RPGRQ92834 1020 aaKnown RBP17.57■□□□□ 0.4
UPK1A-203ENST00000616789 ABCC4O15439 1325 aa17.57■□□□□ 0.4
UPK1A-203ENST00000616789 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
UPK1A-203ENST00000616789 PCCAP05165 728 aaPredicted RBP17.56■□□□□ 0.4
UPK1A-203ENST00000616789 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
UPK1A-203ENST00000616789 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
UPK1A-203ENST00000616789 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
UPK1A-203ENST00000616789 TAOK3Q9H2K8 898 aa17.56■□□□□ 0.4
UPK1A-203ENST00000616789 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
UPK1A-203ENST00000616789 KIF3CO14782 793 aa17.55■□□□□ 0.4
UPK1A-203ENST00000616789 CWF19L2Q2TBE0 894 aaKnown RBP17.55■□□□□ 0.4
UPK1A-203ENST00000616789 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
UPK1A-203ENST00000616789 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
UPK1A-203ENST00000616789 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
UPK1A-203ENST00000616789 ZC3H4Q9UPT8 1303 aaKnown RBP17.55■□□□□ 0.4
UPK1A-203ENST00000616789 FKBP4Q02790 459 aaKnown RBP eCLIP17.54■□□□□ 0.4
UPK1A-203ENST00000616789 RTKN2Q8IZC4 609 aa17.54■□□□□ 0.4
UPK1A-203ENST00000616789 ZNF526Q8TF50 670 aaPredicted RBP17.54■□□□□ 0.4
UPK1A-203ENST00000616789 GPBP1L1Q9HC44 474 aaPredicted RBP17.54■□□□□ 0.4
UPK1A-203ENST00000616789 H7C1W4 665 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 BBOX1O75936 387 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 CASP7P55210 303 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 CC2D2BQ6DHV5 1058 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 DNAAF4Q8WXU2 420 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 PSMD1Q99460 953 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 ATP6V0A2Q9Y487 856 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 COL4A5P29400 1685 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 F6X3S4 739 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 PPEF1O14829 653 aaPredicted RBP17.53■□□□□ 0.4
UPK1A-203ENST00000616789 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
UPK1A-203ENST00000616789 GRAPQ13588 217 aa17.53■□□□□ 0.4
UPK1A-203ENST00000616789 MRPL50Q8N5N7 158 aaKnown RBP17.53■□□□□ 0.4
UPK1A-203ENST00000616789 GRAPLQ8TC17 118 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms