RNA–Protein interactions for RNA: ENST00000616176.4

PARP6-223, Transcript of poly(ADP-ribose) polymerase family member 6, human

TSL 5 BASIC

Gene PARP6, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PARP6-223	ENST00000616176	CCAR2	Q8N163	923 aa	Known RBP	12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	NBPF15	Q8N660	670 aa		12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	INTS4	Q96HW7	963 aa	Known RBP	12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	USP26	Q9BXU7	913 aa		12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	PRDM15	P57071	1507 aa	Predicted RBP	12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	CCDC151	A5D8V7	595 aa		12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	NUCB1	Q02818	461 aa		12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	CEP112	Q8N8E3	955 aa		12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	CACTIN	Q8WUQ7	758 aa	Known RBP	12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	AGAP3	Q96P47	875 aa		12.79	□□□□□ -0.36
PARP6-223	ENST00000616176	TADA3	O75528	432 aa		12.78	□□□□□ -0.36
PARP6-223	ENST00000616176	ZNF75D	P51815	510 aa		12.78	□□□□□ -0.36
PARP6-223	ENST00000616176	CLNS1A	P54105	237 aa	Known RBP	12.78	□□□□□ -0.36
PARP6-223	ENST00000616176	SFSWAP	Q12872	951 aa	Known RBP	12.78	□□□□□ -0.36
PARP6-223	ENST00000616176	SPATA21	Q7Z572	469 aa		12.78	□□□□□ -0.36
PARP6-223	ENST00000616176	CCDC50	Q8IVM0	306 aa		12.78	□□□□□ -0.36
PARP6-223	ENST00000616176	CCDC34	Q96HJ3	373 aa		12.78	□□□□□ -0.36
PARP6-223	ENST00000616176	EXOC5	O00471	708 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	NPHP1	O15259	732 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	CAVIN2	O95810	425 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	NAP1L1	P55209	391 aa	Known RBP	12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	BRD3	Q15059	726 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	CCDC178	Q5BJE1	867 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	KIF9	Q9HAQ2	790 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	LMCD1	Q9NZU5	365 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	VPS18	Q9P253	973 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	AKAP2	Q9Y2D5	859 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	ARHGEF12	Q9NZN5	1544 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	TTC41P	Q6P2S7	1318 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	PHLPP2	Q6ZVD8	1323 aa		12.77	□□□□□ -0.36
PARP6-223	ENST00000616176	EME2	A4GXA9	379 aa	Predicted RBP	12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	APOBR	Q0VD83	1088 aa		12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	SNW1	Q13573	536 aa	Known RBP	12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	FBXW10	Q5XX13	1052 aa		12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	TBC1D9	Q6ZT07	1266 aa		12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	BRAP	Q7Z569	592 aa		12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	MYLK4	Q86YV6	388 aa	Predicted RBP	12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	ZGPAT	Q8N5A5	531 aa	Known RBP	12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	FAM71B	Q8TC56	605 aa		12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	PARD3B	Q8TEW8	1205 aa		12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	UBA5	Q9GZZ9	404 aa		12.77	□□□□□ -0.37
PARP6-223	ENST00000616176	PSD	A5PKW4	1024 aa	Predicted RBP	12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	EBAG9	O00559	213 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	CDC45	O75419	566 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	OAT	P04181	439 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	INPP5B	P32019	993 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	LIG3	P49916	1009 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	RARS	P54136	660 aa	Known RBP	12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	TMED1	Q13445	227 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	IQCB1	Q15051	598 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	USP48	Q86UV5	1035 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	SPATS2	Q86XZ4	545 aa	Known RBP	12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	C3orf20	Q8ND61	904 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	XAGE2	Q96GT9	111 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	IRX2	Q9BZI1	471 aa	Predicted RBP	12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	RBM47	A0AV96	593 aa	Known RBP	12.76	□□□□□ -0.37
PARP6-223	ENST00000616176		H3BQF6	201 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	AHCYL1	O43865	530 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	FSBP	O95073	299 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	EZR	P15311	586 aa	Known RBP	12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	MFN1	Q8IWA4	741 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	ATP6V0A4	Q9HBG4	840 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	CASKIN1	Q8WXD9	1431 aa		12.76	□□□□□ -0.37
PARP6-223	ENST00000616176	WDR33	Q9C0J8	1336 aa	Known RBP	12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	CCDC141	Q6ZP82	1450 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	TPD52L2	O43399	206 aa	Known RBP	12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	PIK3C2G	O75747	1445 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	SEC31A	O94979	1220 aa	Known RBP	12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	FES	P07332	822 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	GNAI1	P63096	354 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	OR8K1	Q8NGG5	319 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	C17orf50	Q8WW18	174 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	EZH1	Q92800	747 aa	Predicted RBP	12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	DNAI1	Q9UI46	699 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	CLTCL1	P53675	1640 aa		12.75	□□□□□ -0.37
PARP6-223	ENST00000616176	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	TUBB4B	P68371	445 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	MIPOL1	Q8TD10	442 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	OSBPL9	Q96SU4	736 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	TRIM5	Q9C035	493 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	RGL1	Q9NZL6	768 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	SMARCA4	P51532	1647 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	TCHH	Q07283	1943 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	PLCB4	Q15147	1175 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	HDX	Q7Z353	690 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	TDRD7	Q8NHU6	1098 aa	Known RBP	12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	SNRNP27	Q8WVK2	155 aa	Known RBP	12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	RABGGTA	Q92696	567 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	FAM169A	Q9Y6X4	670 aa		12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	TCOF1	Q13428	1488 aa	Known RBP	12.74	□□□□□ -0.37
PARP6-223	ENST00000616176	GADD45B	O75293	160 aa	Predicted RBP	12.73	□□□□□ -0.37
PARP6-223	ENST00000616176	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.73	□□□□□ -0.37
PARP6-223	ENST00000616176	CUL4A	Q13619	759 aa		12.73	□□□□□ -0.37
PARP6-223	ENST00000616176	LAMB3	Q13751	1172 aa		12.73	□□□□□ -0.37
PARP6-223	ENST00000616176	DBN1	Q16643	649 aa		12.73	□□□□□ -0.37
PARP6-223	ENST00000616176	TRIM42	Q8IWZ5	723 aa		12.73	□□□□□ -0.37
PARP6-223	ENST00000616176	MRFAP1L1	Q96HT8	127 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms