RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 HYPKQ9NX55 129 aa13.48□□□□□ -0.25
LINC00649-217ENST00000616030 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
LINC00649-217ENST00000616030 DDX60Q8IY21 1712 aaKnown RBP13.47□□□□□ -0.25
LINC00649-217ENST00000616030 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
LINC00649-217ENST00000616030 NPHP1O15259 732 aa13.47□□□□□ -0.25
LINC00649-217ENST00000616030 RASSF7Q02833 373 aa13.47□□□□□ -0.25
LINC00649-217ENST00000616030 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
LINC00649-217ENST00000616030 PLBD2Q8NHP8 589 aa13.47□□□□□ -0.25
LINC00649-217ENST00000616030 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.25
LINC00649-217ENST00000616030 KIF3CO14782 793 aa13.46□□□□□ -0.25
LINC00649-217ENST00000616030 GPTP24298 496 aa13.46□□□□□ -0.25
LINC00649-217ENST00000616030 TRIM28Q13263 835 aaKnown RBP13.46□□□□□ -0.25
LINC00649-217ENST00000616030 ERFEQ4G0M1 354 aa13.46□□□□□ -0.25
LINC00649-217ENST00000616030 NLRP10Q86W26 655 aa13.46□□□□□ -0.25
LINC00649-217ENST00000616030 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
LINC00649-217ENST00000616030 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
LINC00649-217ENST00000616030 WDR90Q96KV7 1748 aa13.46□□□□□ -0.25
LINC00649-217ENST00000616030 LRRC37AA6NMS7 1700 aa13.45□□□□□ -0.26
LINC00649-217ENST00000616030 CEP350Q5VT06 3117 aa13.45□□□□□ -0.26
LINC00649-217ENST00000616030 C21orf2O43822 256 aa13.45□□□□□ -0.26
LINC00649-217ENST00000616030 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
LINC00649-217ENST00000616030 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
LINC00649-217ENST00000616030 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
LINC00649-217ENST00000616030 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
LINC00649-217ENST00000616030 CCDC93Q567U6 631 aa13.44□□□□□ -0.26
LINC00649-217ENST00000616030 ANKRD13DQ6ZTN6 518 aa13.44□□□□□ -0.26
LINC00649-217ENST00000616030 NECTIN2Q92692 538 aa13.44□□□□□ -0.26
LINC00649-217ENST00000616030 CRAMP1Q96RY5 1269 aa13.44□□□□□ -0.26
LINC00649-217ENST00000616030 UTP14AQ9BVJ6 771 aaKnown RBP13.44□□□□□ -0.26
LINC00649-217ENST00000616030 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
LINC00649-217ENST00000616030 GTF2E1P29083 439 aaPredicted RBP13.43□□□□□ -0.26
LINC00649-217ENST00000616030 GRIPAP1Q4V328 841 aa13.43□□□□□ -0.26
LINC00649-217ENST00000616030 CCDC30Q5VVM6 783 aa13.43□□□□□ -0.26
LINC00649-217ENST00000616030 CC2D2BQ6DHV5 1058 aa13.43□□□□□ -0.26
LINC00649-217ENST00000616030 TAOK3Q9H2K8 898 aa13.43□□□□□ -0.26
LINC00649-217ENST00000616030 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
LINC00649-217ENST00000616030 SH3TC1Q8TE82 1336 aa13.42□□□□□ -0.26
LINC00649-217ENST00000616030 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
LINC00649-217ENST00000616030 FAM177BA6PVY3 158 aa13.42□□□□□ -0.26
LINC00649-217ENST00000616030 AIMP1Q12904 312 aaKnown RBP13.42□□□□□ -0.26
LINC00649-217ENST00000616030 RTKN2Q8IZC4 609 aa13.42□□□□□ -0.26
LINC00649-217ENST00000616030 TSPYL6Q8N831 410 aa13.42□□□□□ -0.26
LINC00649-217ENST00000616030 TSR2Q969E8 191 aaKnown RBP13.42□□□□□ -0.26
LINC00649-217ENST00000616030 PSMD1Q99460 953 aa13.42□□□□□ -0.26
LINC00649-217ENST00000616030 GLTPD2A6NH11 291 aa13.41□□□□□ -0.26
LINC00649-217ENST00000616030 FKBP4Q02790 459 aaKnown RBP eCLIP13.41□□□□□ -0.26
LINC00649-217ENST00000616030 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
LINC00649-217ENST00000616030 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
LINC00649-217ENST00000616030 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
LINC00649-217ENST00000616030 RPGRQ92834 1020 aaKnown RBP13.4□□□□□ -0.26
LINC00649-217ENST00000616030 RBM17Q96I25 401 aaKnown RBP13.4□□□□□ -0.26
LINC00649-217ENST00000616030 PHAXQ9H814 394 aaKnown RBP13.4□□□□□ -0.26
LINC00649-217ENST00000616030 TOMM70O94826 608 aa13.39□□□□□ -0.27
LINC00649-217ENST00000616030 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
LINC00649-217ENST00000616030 TWISTNBQ3B726 338 aaPredicted RBP13.39□□□□□ -0.27
LINC00649-217ENST00000616030 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
LINC00649-217ENST00000616030 NMRK2Q9NPI5 230 aa13.39□□□□□ -0.27
LINC00649-217ENST00000616030 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
LINC00649-217ENST00000616030 ABCC4O15439 1325 aa13.39□□□□□ -0.27
LINC00649-217ENST00000616030 ELL2O00472 640 aaPredicted RBP13.38□□□□□ -0.27
LINC00649-217ENST00000616030 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
LINC00649-217ENST00000616030 CCDC191Q8NCU4 936 aa13.38□□□□□ -0.27
LINC00649-217ENST00000616030 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
LINC00649-217ENST00000616030 SALL2Q9Y467 1007 aaPredicted RBP13.38□□□□□ -0.27
LINC00649-217ENST00000616030 SCN4AP35499 1836 aa13.38□□□□□ -0.27
LINC00649-217ENST00000616030 COL4A5P29400 1685 aa13.37□□□□□ -0.27
LINC00649-217ENST00000616030 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
LINC00649-217ENST00000616030 PPEF1O14829 653 aaPredicted RBP13.37□□□□□ -0.27
LINC00649-217ENST00000616030 DDX58O95786 925 aaKnown RBP13.37□□□□□ -0.27
LINC00649-217ENST00000616030 TMC4Q7Z404 712 aa13.37□□□□□ -0.27
LINC00649-217ENST00000616030 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
LINC00649-217ENST00000616030 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
LINC00649-217ENST00000616030 METTL22Q9BUU2 404 aaPredicted RBP13.37□□□□□ -0.27
LINC00649-217ENST00000616030 VPS33BQ9H267 617 aa13.37□□□□□ -0.27
LINC00649-217ENST00000616030 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
LINC00649-217ENST00000616030 MYH3P11055 1940 aa13.37□□□□□ -0.27
LINC00649-217ENST00000616030 FZD9O00144 591 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 VAMP4O75379 141 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 BBOX1O75936 387 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 OLFM4Q6UX06 510 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 KSR2Q6VAB6 950 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 SYNE4Q8N205 404 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 RTFDC1Q9BY42 306 aaPredicted RBP13.36□□□□□ -0.27
LINC00649-217ENST00000616030 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
LINC00649-217ENST00000616030 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
LINC00649-217ENST00000616030 COL4A1P02462 1669 aa13.36□□□□□ -0.27
LINC00649-217ENST00000616030 ADAMTSL1Q8N6G6 1762 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 POTECB2RU33 542 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 PCCAP05165 728 aaPredicted RBP13.35□□□□□ -0.27
LINC00649-217ENST00000616030 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
LINC00649-217ENST00000616030 HSP90B1P14625 803 aaKnown RBP13.35□□□□□ -0.27
LINC00649-217ENST00000616030 IARSP41252 1262 aaKnown RBP13.35□□□□□ -0.27
LINC00649-217ENST00000616030 FSTL1Q12841 308 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 GRAPQ13588 217 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
LINC00649-217ENST00000616030 GRAPLQ8TC17 118 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms