RNA–Protein interactions for RNA: ENST00000615838.1

SDCBP2-206, Transcript of syndecan binding protein 2, humanhuman

TSL 2

Gene SDCBP2, Length 1,096 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-206ENST00000615838 HOXB7P09629 217 aa21.85■■□□□ 1.09
SDCBP2-206ENST00000615838 ZNF853P0CG23 659 aa21.85■■□□□ 1.09
SDCBP2-206ENST00000615838 ALDH1B1P30837 517 aa21.85■■□□□ 1.09
SDCBP2-206ENST00000615838 RBM46Q8TBY0 533 aaKnown RBP21.85■■□□□ 1.09
SDCBP2-206ENST00000615838 WDR90Q96KV7 1748 aa21.85■■□□□ 1.09
SDCBP2-206ENST00000615838 TAF1P21675 1872 aa21.85■■□□□ 1.09
SDCBP2-206ENST00000615838 C3orf67Q6ZVT6 689 aa21.84■■□□□ 1.09
SDCBP2-206ENST00000615838 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
SDCBP2-206ENST00000615838 UTP14AQ9BVJ6 771 aaKnown RBP21.83■■□□□ 1.09
SDCBP2-206ENST00000615838 IFT57Q9NWB7 429 aa21.83■■□□□ 1.09
SDCBP2-206ENST00000615838 GNAI1P63096 354 aa21.82■■□□□ 1.08
SDCBP2-206ENST00000615838 CALD1Q05682 793 aaKnown RBP21.82■■□□□ 1.08
SDCBP2-206ENST00000615838 ZNF277Q9NRM2 450 aaPredicted RBP21.82■■□□□ 1.08
SDCBP2-206ENST00000615838 VEGFAP15692 232 aaPredicted RBP21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 HOXA10P31260 410 aaPredicted RBP21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 FKBP4Q02790 459 aaKnown RBP eCLIP21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 TCIRG1Q13488 830 aa21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 HSP90AB3PQ58FF7 597 aa21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 DPY19L2Q6NUT2 758 aa21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 NLRP10Q86W26 655 aa21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 RTKN2Q8IZC4 609 aa21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 ZNF428Q96B54 188 aa21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 DBF4Q9UBU7 674 aaPredicted RBP21.81■■□□□ 1.08
SDCBP2-206ENST00000615838 ELL2O00472 640 aaPredicted RBP21.8■■□□□ 1.08
SDCBP2-206ENST00000615838 DDX60Q8IY21 1712 aaKnown RBP21.8■■□□□ 1.08
SDCBP2-206ENST00000615838 SLC51AQ86UW1 340 aa21.79■■□□□ 1.08
SDCBP2-206ENST00000615838 SYNE4Q8N205 404 aa21.79■■□□□ 1.08
SDCBP2-206ENST00000615838 RBM17Q96I25 401 aaKnown RBP21.79■■□□□ 1.08
SDCBP2-206ENST00000615838 SNED1Q8TER0 1413 aa21.79■■□□□ 1.08
SDCBP2-206ENST00000615838 POTECB2RU33 542 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 ANP32CO43423 234 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 FSTL1Q12841 308 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 SLC10A5Q5PT55 438 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 PLBD2Q8NHP8 589 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 NLRP3Q96P20 1036 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 CRAMP1Q96RY5 1269 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 MRS2Q9HD23 443 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 HYPKQ9NX55 129 aa21.78■■□□□ 1.08
SDCBP2-206ENST00000615838 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
SDCBP2-206ENST00000615838 DDNO94850 711 aaPredicted RBP21.77■■□□□ 1.08
SDCBP2-206ENST00000615838 HCLS1P14317 486 aaPredicted RBP21.77■■□□□ 1.08
SDCBP2-206ENST00000615838 APLP1P51693 650 aa21.77■■□□□ 1.08
SDCBP2-206ENST00000615838 ANKRD13DQ6ZTN6 518 aa21.77■■□□□ 1.08
SDCBP2-206ENST00000615838 TRMT112Q9UI30 125 aaKnown RBP21.77■■□□□ 1.08
SDCBP2-206ENST00000615838 SCN4AP35499 1836 aa21.77■■□□□ 1.08
SDCBP2-206ENST00000615838 RNF123Q5XPI4 1314 aa21.77■■□□□ 1.07
SDCBP2-206ENST00000615838 PPEF1O14829 653 aaPredicted RBP21.76■■□□□ 1.07
SDCBP2-206ENST00000615838 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
SDCBP2-206ENST00000615838 IARSP41252 1262 aaKnown RBP21.75■■□□□ 1.07
SDCBP2-206ENST00000615838 SMC1BQ8NDV3 1235 aa21.75■■□□□ 1.07
SDCBP2-206ENST00000615838 ATP5J2-PTCD1G3V325 749 aa21.74■■□□□ 1.07
SDCBP2-206ENST00000615838 CC2D2BQ6DHV5 1058 aa21.74■■□□□ 1.07
SDCBP2-206ENST00000615838 PSMD1Q99460 953 aa21.74■■□□□ 1.07
SDCBP2-206ENST00000615838 SH3TC1Q8TE82 1336 aa21.74■■□□□ 1.07
SDCBP2-206ENST00000615838 ZNF541Q9H0D2 1346 aa21.74■■□□□ 1.07
SDCBP2-206ENST00000615838 COL4A5P29400 1685 aa21.73■■□□□ 1.07
SDCBP2-206ENST00000615838 TSR2Q969E8 191 aaKnown RBP21.73■■□□□ 1.07
SDCBP2-206ENST00000615838 ISCA1Q9BUE6 129 aa21.73■■□□□ 1.07
SDCBP2-206ENST00000615838 PHAXQ9H814 394 aaKnown RBP21.73■■□□□ 1.07
SDCBP2-206ENST00000615838 ABCC4O15439 1325 aa21.73■■□□□ 1.07
SDCBP2-206ENST00000615838 WWC1Q8IX03 1113 aa21.72■■□□□ 1.07
SDCBP2-206ENST00000615838 TSPYL6Q8N831 410 aa21.72■■□□□ 1.07
SDCBP2-206ENST00000615838 CACNA1FO60840 1977 aa21.72■■□□□ 1.07
SDCBP2-206ENST00000615838 HTRA3P83110 453 aa21.71■■□□□ 1.07
SDCBP2-206ENST00000615838 CCDC27Q2M243 656 aa21.71■■□□□ 1.07
SDCBP2-206ENST00000615838 GOLGA2Q08379 1002 aa21.7■■□□□ 1.06
SDCBP2-206ENST00000615838 RIC3Q7Z5B4 369 aa21.7■■□□□ 1.06
SDCBP2-206ENST00000615838 FAM89AQ96GI7 184 aa21.7■■□□□ 1.06
SDCBP2-206ENST00000615838 FZD9O00144 591 aa21.69■■□□□ 1.06
SDCBP2-206ENST00000615838 GRIPAP1Q4V328 841 aa21.69■■□□□ 1.06
SDCBP2-206ENST00000615838 RTL5Q5HYW3 569 aaPredicted RBP21.69■■□□□ 1.06
SDCBP2-206ENST00000615838 ATP6V0A2Q9Y487 856 aa21.69■■□□□ 1.06
SDCBP2-206ENST00000615838 CCDC30Q5VVM6 783 aa21.68■■□□□ 1.06
SDCBP2-206ENST00000615838 DDX46Q7L014 1031 aaKnown RBP21.68■■□□□ 1.06
SDCBP2-206ENST00000615838 DNAJC5GQ8N7S2 189 aa21.68■■□□□ 1.06
SDCBP2-206ENST00000615838 JDP2Q8WYK2 163 aa21.68■■□□□ 1.06
SDCBP2-206ENST00000615838 L3MBTL3Q96JM7 780 aaPredicted RBP21.68■■□□□ 1.06
SDCBP2-206ENST00000615838 LRRC37AA6NMS7 1700 aa21.67■■□□□ 1.06
SDCBP2-206ENST00000615838 POTEIP0CG38 1075 aa21.67■■□□□ 1.06
SDCBP2-206ENST00000615838 POTEJP0CG39 1038 aa21.67■■□□□ 1.06
SDCBP2-206ENST00000615838 TMX4Q9H1E5 349 aaPredicted RBP21.67■■□□□ 1.06
SDCBP2-206ENST00000615838 SALL2Q9Y467 1007 aaPredicted RBP21.67■■□□□ 1.06
SDCBP2-206ENST00000615838 PCNTO95613 3336 aa21.67■■□□□ 1.06
SDCBP2-206ENST00000615838 COL4A1P02462 1669 aa21.66■■□□□ 1.06
SDCBP2-206ENST00000615838 BBOX1O75936 387 aa21.66■■□□□ 1.06
SDCBP2-206ENST00000615838 TRIM28Q13263 835 aaKnown RBP21.66■■□□□ 1.06
SDCBP2-206ENST00000615838 LARGE2Q8N3Y3 721 aa21.66■■□□□ 1.06
SDCBP2-206ENST00000615838 MYD88Q99836 296 aa21.66■■□□□ 1.06
SDCBP2-206ENST00000615838 MYH3P11055 1940 aa21.66■■□□□ 1.06
SDCBP2-206ENST00000615838 IQCA1LA6NCM1 817 aa21.65■■□□□ 1.06
SDCBP2-206ENST00000615838 GRAPQ13588 217 aa21.65■■□□□ 1.06
SDCBP2-206ENST00000615838 GRAPLQ8TC17 118 aaPredicted RBP21.65■■□□□ 1.06
SDCBP2-206ENST00000615838 IL16Q14005 1332 aa21.64■■□□□ 1.05
SDCBP2-206ENST00000615838 SP8Q8IXZ3 490 aa21.64■■□□□ 1.05
SDCBP2-206ENST00000615838 CHMP4AQ9BY43 222 aa21.64■■□□□ 1.05
SDCBP2-206ENST00000615838 TAF1DQ9H5J8 278 aaPredicted RBP21.64■■□□□ 1.05
SDCBP2-206ENST00000615838 IRS4O14654 1257 aaPredicted RBP21.63■■□□□ 1.05
SDCBP2-206ENST00000615838 PPIP5K2O43314 1243 aa21.63■■□□□ 1.05
SDCBP2-206ENST00000615838 AOC3Q16853 763 aa21.63■■□□□ 1.05
SDCBP2-206ENST00000615838 TWISTNBQ3B726 338 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms