RNA–Protein interactions for RNA: ENST00000615596.1

GTF2I-216, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-216ENST00000615596 CHD4Q14839 1912 aa17.69■□□□□ 0.42
GTF2I-216ENST00000615596 KLRG2A4D1S0 409 aaPredicted RBP17.69■□□□□ 0.42
GTF2I-216ENST00000615596 TCERG1O14776 1098 aaKnown RBP17.69■□□□□ 0.42
GTF2I-216ENST00000615596 NTSR2O95665 410 aa17.69■□□□□ 0.42
GTF2I-216ENST00000615596 SRGNP10124 158 aa17.69■□□□□ 0.42
GTF2I-216ENST00000615596 ERFEQ4G0M1 354 aa17.69■□□□□ 0.42
GTF2I-216ENST00000615596 NUTM1Q86Y26 1132 aa17.69■□□□□ 0.42
GTF2I-216ENST00000615596 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
GTF2I-216ENST00000615596 VAMP4O75379 141 aa17.68■□□□□ 0.42
GTF2I-216ENST00000615596 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
GTF2I-216ENST00000615596 NLRP10Q86W26 655 aa17.68■□□□□ 0.42
GTF2I-216ENST00000615596 ZNF622Q969S3 477 aaKnown RBP eCLIP17.68■□□□□ 0.42
GTF2I-216ENST00000615596 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
GTF2I-216ENST00000615596 DLEC1Q9Y238 1755 aa17.68■□□□□ 0.42
GTF2I-216ENST00000615596 ABCC12Q96J65 1359 aa17.67■□□□□ 0.42
GTF2I-216ENST00000615596 ARHGAP27Q6ZUM4 889 aa17.67■□□□□ 0.42
GTF2I-216ENST00000615596 UTP14AQ9BVJ6 771 aaKnown RBP17.67■□□□□ 0.42
GTF2I-216ENST00000615596 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
GTF2I-216ENST00000615596 STYK1Q6J9G0 422 aa17.66■□□□□ 0.42
GTF2I-216ENST00000615596 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
GTF2I-216ENST00000615596 MASTLQ96GX5 879 aa17.66■□□□□ 0.42
GTF2I-216ENST00000615596 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
GTF2I-216ENST00000615596 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
GTF2I-216ENST00000615596 CNKSR1Q969H4 720 aa17.65■□□□□ 0.42
GTF2I-216ENST00000615596 ANKRD36CQ5JPF3 1778 aa17.65■□□□□ 0.42
GTF2I-216ENST00000615596 E9PSI1 815 aa17.64■□□□□ 0.41
GTF2I-216ENST00000615596 ATP5J2-PTCD1G3V325 749 aa17.64■□□□□ 0.41
GTF2I-216ENST00000615596 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
GTF2I-216ENST00000615596 NPR1P16066 1061 aa17.64■□□□□ 0.41
GTF2I-216ENST00000615596 G2E3Q7L622 706 aa17.64■□□□□ 0.41
GTF2I-216ENST00000615596 RNF123Q5XPI4 1314 aa17.64■□□□□ 0.41
GTF2I-216ENST00000615596 RIC1Q4ADV7 1423 aa17.64■□□□□ 0.41
GTF2I-216ENST00000615596 SLFN5Q08AF3 891 aa17.63■□□□□ 0.41
GTF2I-216ENST00000615596 TRIM28Q13263 835 aaKnown RBP17.63■□□□□ 0.41
GTF2I-216ENST00000615596 CRY2Q49AN0 593 aa17.63■□□□□ 0.41
GTF2I-216ENST00000615596 SLC10A5Q5PT55 438 aa17.63■□□□□ 0.41
GTF2I-216ENST00000615596 ZNF428Q96B54 188 aa17.63■□□□□ 0.41
GTF2I-216ENST00000615596 TRMT112Q9UI30 125 aaKnown RBP17.63■□□□□ 0.41
GTF2I-216ENST00000615596 TNRC6CQ9HCJ0 1690 aaKnown RBP17.62■□□□□ 0.41
GTF2I-216ENST00000615596 ARFGEF2Q9Y6D5 1785 aa17.62■□□□□ 0.41
GTF2I-216ENST00000615596 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
GTF2I-216ENST00000615596 C3orf67Q6ZVT6 689 aa17.62■□□□□ 0.41
GTF2I-216ENST00000615596 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
GTF2I-216ENST00000615596 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
GTF2I-216ENST00000615596 PI4KAP2A4QPH2 592 aa17.61■□□□□ 0.41
GTF2I-216ENST00000615596 C21orf2O43822 256 aa17.61■□□□□ 0.41
GTF2I-216ENST00000615596 KSR2Q6VAB6 950 aa17.61■□□□□ 0.41
GTF2I-216ENST00000615596 PI4KAP1Q8N8J0 262 aa17.61■□□□□ 0.41
GTF2I-216ENST00000615596 MYD88Q99836 296 aa17.61■□□□□ 0.41
GTF2I-216ENST00000615596 METTL22Q9BUU2 404 aaPredicted RBP17.61■□□□□ 0.41
GTF2I-216ENST00000615596 MAP3K2Q9Y2U5 619 aa17.61■□□□□ 0.41
GTF2I-216ENST00000615596 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
GTF2I-216ENST00000615596 FLIIQ13045 1269 aa17.6■□□□□ 0.41
GTF2I-216ENST00000615596 ZNF784Q8NCA9 323 aaPredicted RBP17.6■□□□□ 0.41
GTF2I-216ENST00000615596 NLRP3Q96P20 1036 aa17.6■□□□□ 0.41
GTF2I-216ENST00000615596 ADCY9O60503 1353 aa17.6■□□□□ 0.41
GTF2I-216ENST00000615596 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
GTF2I-216ENST00000615596 HCLS1P14317 486 aaPredicted RBP17.59■□□□□ 0.41
GTF2I-216ENST00000615596 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
GTF2I-216ENST00000615596 HOXA10P31260 410 aaPredicted RBP17.59■□□□□ 0.41
GTF2I-216ENST00000615596 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
GTF2I-216ENST00000615596 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
GTF2I-216ENST00000615596 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
GTF2I-216ENST00000615596 CCDC191Q8NCU4 936 aa17.58■□□□□ 0.4
GTF2I-216ENST00000615596 C7orf43Q8WVR3 580 aa17.58■□□□□ 0.4
GTF2I-216ENST00000615596 NFKBIEO00221 500 aa17.57■□□□□ 0.4
GTF2I-216ENST00000615596 RASSF7Q02833 373 aa17.57■□□□□ 0.4
GTF2I-216ENST00000615596 FKBP5Q13451 457 aaPredicted RBP17.57■□□□□ 0.4
GTF2I-216ENST00000615596 C9orf131Q5VYM1 1079 aa17.57■□□□□ 0.4
GTF2I-216ENST00000615596 IGKV5-2P06315 115 aa17.56■□□□□ 0.4
GTF2I-216ENST00000615596 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
GTF2I-216ENST00000615596 SOGA3Q5TF21 947 aa17.56■□□□□ 0.4
GTF2I-216ENST00000615596 ZBTB38Q8NAP3 1195 aaPredicted RBP17.56■□□□□ 0.4
GTF2I-216ENST00000615596 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
GTF2I-216ENST00000615596 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
GTF2I-216ENST00000615596 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
GTF2I-216ENST00000615596 CACNA1FO60840 1977 aa17.56■□□□□ 0.4
GTF2I-216ENST00000615596 PRELPP51888 382 aa17.55■□□□□ 0.4
GTF2I-216ENST00000615596 NEXNQ0ZGT2 675 aa17.55■□□□□ 0.4
GTF2I-216ENST00000615596 CACNA1SQ13698 1873 aa17.54■□□□□ 0.4
GTF2I-216ENST00000615596 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
GTF2I-216ENST00000615596 PCCAP05165 728 aaPredicted RBP17.54■□□□□ 0.4
GTF2I-216ENST00000615596 LMNB1P20700 586 aa17.54■□□□□ 0.4
GTF2I-216ENST00000615596 OLFM4Q6UX06 510 aa17.54■□□□□ 0.4
GTF2I-216ENST00000615596 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
GTF2I-216ENST00000615596 RNF181Q9P0P0 153 aa17.54■□□□□ 0.4
GTF2I-216ENST00000615596 NEURL1BA8MQ27 555 aa17.53■□□□□ 0.4
GTF2I-216ENST00000615596 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.4
GTF2I-216ENST00000615596 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
GTF2I-216ENST00000615596 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
GTF2I-216ENST00000615596 ABCC4O15439 1325 aa17.52■□□□□ 0.4
GTF2I-216ENST00000615596 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
GTF2I-216ENST00000615596 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
GTF2I-216ENST00000615596 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
GTF2I-216ENST00000615596 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.4
GTF2I-216ENST00000615596 DDX60Q8IY21 1712 aaKnown RBP17.52■□□□□ 0.39
GTF2I-216ENST00000615596 SBF1O95248 1867 aa17.52■□□□□ 0.39
GTF2I-216ENST00000615596 FER1L6Q2WGJ9 1857 aa17.52■□□□□ 0.39
GTF2I-216ENST00000615596 LAMB2P55268 1798 aa17.51■□□□□ 0.39
GTF2I-216ENST00000615596 F6X3S4 739 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms