RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 DDNO94850 711 aaPredicted RBP28.34■■■□□ 2.13
CBWD1-223ENST00000613988 HTRA3P83110 453 aa28.34■■■□□ 2.13
CBWD1-223ENST00000613988 PARP10Q53GL7 1025 aa28.34■■■□□ 2.13
CBWD1-223ENST00000613988 NTSR2O95665 410 aa28.33■■■□□ 2.13
CBWD1-223ENST00000613988 ZNF277Q9NRM2 450 aaPredicted RBP28.33■■■□□ 2.13
CBWD1-223ENST00000613988 AIMP1Q12904 312 aaKnown RBP28.32■■■□□ 2.12
CBWD1-223ENST00000613988 COPS6Q7L5N1 327 aa28.32■■■□□ 2.12
CBWD1-223ENST00000613988 HOXA10P31260 410 aaPredicted RBP28.31■■■□□ 2.12
CBWD1-223ENST00000613988 KRT24Q2M2I5 525 aa28.31■■■□□ 2.12
CBWD1-223ENST00000613988 SYNE4Q8N205 404 aa28.3■■■□□ 2.12
CBWD1-223ENST00000613988 XAGE3Q8WTP9 111 aa28.3■■■□□ 2.12
CBWD1-223ENST00000613988 RBM17Q96I25 401 aaKnown RBP28.3■■■□□ 2.12
CBWD1-223ENST00000613988 UTP14AQ9BVJ6 771 aaKnown RBP28.3■■■□□ 2.12
CBWD1-223ENST00000613988 RIC1Q4ADV7 1423 aa28.3■■■□□ 2.12
CBWD1-223ENST00000613988 DDX21Q9NR30 783 aaKnown RBP eCLIP28.29■■■□□ 2.12
CBWD1-223ENST00000613988 HSP90AB3PQ58FF7 597 aa28.28■■■□□ 2.12
CBWD1-223ENST00000613988 CC2D2BQ6DHV5 1058 aa28.28■■■□□ 2.12
CBWD1-223ENST00000613988 NLRP3Q96P20 1036 aa28.28■■■□□ 2.12
CBWD1-223ENST00000613988 IARSP41252 1262 aaKnown RBP28.26■■■□□ 2.12
CBWD1-223ENST00000613988 CFAP44Q96MT7 982 aa28.26■■■□□ 2.12
CBWD1-223ENST00000613988 CRAMP1Q96RY5 1269 aa28.26■■■□□ 2.12
CBWD1-223ENST00000613988 SLC10A5Q5PT55 438 aa28.25■■■□□ 2.11
CBWD1-223ENST00000613988 HDGFL1Q5TGJ6 251 aa28.25■■■□□ 2.11
CBWD1-223ENST00000613988 C3orf67Q6ZVT6 689 aa28.25■■■□□ 2.11
CBWD1-223ENST00000613988 KLRG1Q96E93 195 aa28.25■■■□□ 2.11
CBWD1-223ENST00000613988 PSMD1Q99460 953 aa28.25■■■□□ 2.11
CBWD1-223ENST00000613988 CHPF2Q9P2E5 772 aa28.25■■■□□ 2.11
CBWD1-223ENST00000613988 IQCA1LA6NCM1 817 aa28.24■■■□□ 2.11
CBWD1-223ENST00000613988 TCERG1O14776 1098 aaKnown RBP28.24■■■□□ 2.11
CBWD1-223ENST00000613988 HOXB7P09629 217 aa28.24■■■□□ 2.11
CBWD1-223ENST00000613988 MRS2Q9HD23 443 aa28.24■■■□□ 2.11
CBWD1-223ENST00000613988 APAF1O14727 1248 aa28.23■■■□□ 2.11
CBWD1-223ENST00000613988 PPEF1O14829 653 aaPredicted RBP28.23■■■□□ 2.11
CBWD1-223ENST00000613988 TCIRG1Q13488 830 aa28.23■■■□□ 2.11
CBWD1-223ENST00000613988 GRIPAP1Q4V328 841 aa28.23■■■□□ 2.11
CBWD1-223ENST00000613988 NLRP10Q86W26 655 aa28.23■■■□□ 2.11
CBWD1-223ENST00000613988 L3MBTL3Q96JM7 780 aaPredicted RBP28.23■■■□□ 2.11
CBWD1-223ENST00000613988 RNF123Q5XPI4 1314 aa28.22■■■□□ 2.11
CBWD1-223ENST00000613988 ZNF541Q9H0D2 1346 aa28.22■■■□□ 2.11
CBWD1-223ENST00000613988 CHADLQ6NUI6 762 aa28.22■■■□□ 2.11
CBWD1-223ENST00000613988 JDP2Q8WYK2 163 aa28.22■■■□□ 2.11
CBWD1-223ENST00000613988 SNED1Q8TER0 1413 aa28.21■■■□□ 2.11
CBWD1-223ENST00000613988 ANKRD36CQ5JPF3 1778 aa28.21■■■□□ 2.11
CBWD1-223ENST00000613988 TMX4Q9H1E5 349 aaPredicted RBP28.21■■■□□ 2.11
CBWD1-223ENST00000613988 MBIPQ9NS73 344 aa28.21■■■□□ 2.11
CBWD1-223ENST00000613988 DBF4Q9UBU7 674 aaPredicted RBP28.21■■■□□ 2.11
CBWD1-223ENST00000613988 TRMT112Q9UI30 125 aaKnown RBP28.21■■■□□ 2.11
CBWD1-223ENST00000613988 FZD9O00144 591 aa28.2■■■□□ 2.1
CBWD1-223ENST00000613988 DUSP27Q5VZP5 1158 aa28.2■■■□□ 2.1
CBWD1-223ENST00000613988 POTEIP0CG38 1075 aa28.19■■■□□ 2.1
CBWD1-223ENST00000613988 POTEJP0CG39 1038 aa28.19■■■□□ 2.1
CBWD1-223ENST00000613988 TAF1DQ9H5J8 278 aaPredicted RBP28.19■■■□□ 2.1
CBWD1-223ENST00000613988 SCN4AP35499 1836 aa28.19■■■□□ 2.1
CBWD1-223ENST00000613988 HCLS1P14317 486 aaPredicted RBP28.18■■■□□ 2.1
CBWD1-223ENST00000613988 CALD1Q05682 793 aaKnown RBP28.18■■■□□ 2.1
CBWD1-223ENST00000613988 ANKRD13DQ6ZTN6 518 aa28.18■■■□□ 2.1
CBWD1-223ENST00000613988 PLBD2Q8NHP8 589 aa28.18■■■□□ 2.1
CBWD1-223ENST00000613988 ZNF853P0CG23 659 aa28.17■■■□□ 2.1
CBWD1-223ENST00000613988 CCDC184Q52MB2 194 aa28.17■■■□□ 2.1
CBWD1-223ENST00000613988 HYPKQ9NX55 129 aa28.17■■■□□ 2.1
CBWD1-223ENST00000613988 SLC51AQ86UW1 340 aa28.16■■■□□ 2.1
CBWD1-223ENST00000613988 JMYQ8N9B5 988 aa28.16■■■□□ 2.1
CBWD1-223ENST00000613988 IFT57Q9NWB7 429 aa28.16■■■□□ 2.1
CBWD1-223ENST00000613988 HACL1Q9UJ83 578 aa28.16■■■□□ 2.1
CBWD1-223ENST00000613988 SH3TC1Q8TE82 1336 aa28.16■■■□□ 2.1
CBWD1-223ENST00000613988 EIF6P56537 245 aaKnown RBP28.15■■■□□ 2.1
CBWD1-223ENST00000613988 GNAI1P63096 354 aa28.15■■■□□ 2.1
CBWD1-223ENST00000613988 LDHDQ86WU2 507 aa28.15■■■□□ 2.1
CBWD1-223ENST00000613988 GPC2Q8N158 579 aa28.15■■■□□ 2.1
CBWD1-223ENST00000613988 LARGE2Q8N3Y3 721 aa28.15■■■□□ 2.1
CBWD1-223ENST00000613988 ATP6V0A2Q9Y487 856 aa28.15■■■□□ 2.1
CBWD1-223ENST00000613988 ABCC4O15439 1325 aa28.15■■■□□ 2.1
CBWD1-223ENST00000613988 ZNF428Q96B54 188 aa28.14■■■□□ 2.1
CBWD1-223ENST00000613988 BBOX1O75936 387 aa28.13■■■□□ 2.09
CBWD1-223ENST00000613988 EAPPQ56P03 285 aaPredicted RBP28.13■■■□□ 2.09
CBWD1-223ENST00000613988 YTHDC1Q96MU7 727 aaKnown RBP28.13■■■□□ 2.09
CBWD1-223ENST00000613988 PCNTO95613 3336 aa28.13■■■□□ 2.09
CBWD1-223ENST00000613988 EPHX2P34913 555 aa28.12■■■□□ 2.09
CBWD1-223ENST00000613988 IFFO2Q5TF58 517 aa28.12■■■□□ 2.09
CBWD1-223ENST00000613988 DDX46Q7L014 1031 aaKnown RBP28.12■■■□□ 2.09
CBWD1-223ENST00000613988 ELL2O00472 640 aaPredicted RBP28.11■■■□□ 2.09
CBWD1-223ENST00000613988 CLEC11AQ9Y240 323 aa28.11■■■□□ 2.09
CBWD1-223ENST00000613988 GJA3Q9Y6H8 435 aa28.11■■■□□ 2.09
CBWD1-223ENST00000613988 LAMB2P55268 1798 aa28.11■■■□□ 2.09
CBWD1-223ENST00000613988 ATP5J2-PTCD1G3V325 749 aa28.11■■■□□ 2.09
CBWD1-223ENST00000613988 ISCA1Q9BUE6 129 aa28.11■■■□□ 2.09
CBWD1-223ENST00000613988 COL4A5P29400 1685 aa28.1■■■□□ 2.09
CBWD1-223ENST00000613988 PNMA8AQ86V59 439 aaPredicted RBP28.1■■■□□ 2.09
CBWD1-223ENST00000613988 SP8Q8IXZ3 490 aa28.1■■■□□ 2.09
CBWD1-223ENST00000613988 PPIP5K2O43314 1243 aa28.09■■■□□ 2.09
CBWD1-223ENST00000613988 NIM1KQ8IY84 436 aa28.09■■■□□ 2.09
CBWD1-223ENST00000613988 GRAPQ13588 217 aa28.08■■■□□ 2.09
CBWD1-223ENST00000613988 SUPT20HQ8NEM7 779 aa28.08■■■□□ 2.09
CBWD1-223ENST00000613988 GRAPLQ8TC17 118 aaPredicted RBP28.08■■■□□ 2.09
CBWD1-223ENST00000613988 FAM89AQ96GI7 184 aa28.08■■■□□ 2.09
CBWD1-223ENST00000613988 VPS33BQ9H267 617 aa28.08■■■□□ 2.09
CBWD1-223ENST00000613988 CREBZFQ9NS37 354 aa28.08■■■□□ 2.09
CBWD1-223ENST00000613988 AOC3Q16853 763 aa28.07■■■□□ 2.08
CBWD1-223ENST00000613988 DPP8Q6V1X1 898 aaPredicted RBP28.07■■■□□ 2.08
CBWD1-223ENST00000613988 RIC3Q7Z5B4 369 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms