RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 CHPF2Q9P2E5 772 aa22.33■■□□□ 1.17
CCL3-204ENST00000613922 SNED1Q8TER0 1413 aa22.32■■□□□ 1.16
CCL3-204ENST00000613922 FKBP4Q02790 459 aaKnown RBP eCLIP22.32■■□□□ 1.16
CCL3-204ENST00000613922 FSTL1Q12841 308 aa22.32■■□□□ 1.16
CCL3-204ENST00000613922 AIMP1Q12904 312 aaKnown RBP22.32■■□□□ 1.16
CCL3-204ENST00000613922 HSP90AB3PQ58FF7 597 aa22.32■■□□□ 1.16
CCL3-204ENST00000613922 HDGFL1Q5TGJ6 251 aa22.32■■□□□ 1.16
CCL3-204ENST00000613922 IFT57Q9NWB7 429 aa22.32■■□□□ 1.16
CCL3-204ENST00000613922 VEGFAP15692 232 aaPredicted RBP22.31■■□□□ 1.16
CCL3-204ENST00000613922 CALD1Q05682 793 aaKnown RBP22.31■■□□□ 1.16
CCL3-204ENST00000613922 SLC10A5Q5PT55 438 aa22.31■■□□□ 1.16
CCL3-204ENST00000613922 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
CCL3-204ENST00000613922 DPY19L2Q6NUT2 758 aa22.31■■□□□ 1.16
CCL3-204ENST00000613922 OLFM4Q6UX06 510 aa22.31■■□□□ 1.16
CCL3-204ENST00000613922 RTKN2Q8IZC4 609 aa22.31■■□□□ 1.16
CCL3-204ENST00000613922 UTP14AQ9BVJ6 771 aaKnown RBP22.31■■□□□ 1.16
CCL3-204ENST00000613922 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
CCL3-204ENST00000613922 ZNF316A6NFI3 1004 aaPredicted RBP22.3■■□□□ 1.16
CCL3-204ENST00000613922 POTECB2RU33 542 aa22.3■■□□□ 1.16
CCL3-204ENST00000613922 APLP1P51693 650 aa22.3■■□□□ 1.16
CCL3-204ENST00000613922 GNAI1P63096 354 aa22.3■■□□□ 1.16
CCL3-204ENST00000613922 TCIRG1Q13488 830 aa22.3■■□□□ 1.16
CCL3-204ENST00000613922 DBF4Q9UBU7 674 aaPredicted RBP22.3■■□□□ 1.16
CCL3-204ENST00000613922 C3orf67Q6ZVT6 689 aa22.29■■□□□ 1.16
CCL3-204ENST00000613922 NLRP10Q86W26 655 aa22.29■■□□□ 1.16
CCL3-204ENST00000613922 RPGRQ92834 1020 aaKnown RBP22.29■■□□□ 1.16
CCL3-204ENST00000613922 CRAMP1Q96RY5 1269 aa22.29■■□□□ 1.16
CCL3-204ENST00000613922 RBM17Q96I25 401 aaKnown RBP22.28■■□□□ 1.16
CCL3-204ENST00000613922 CC2D2BQ6DHV5 1058 aa22.27■■□□□ 1.16
CCL3-204ENST00000613922 PLBD2Q8NHP8 589 aa22.27■■□□□ 1.16
CCL3-204ENST00000613922 NLRP3Q96P20 1036 aa22.27■■□□□ 1.16
CCL3-204ENST00000613922 SCN4AP35499 1836 aa22.27■■□□□ 1.15
CCL3-204ENST00000613922 POTEDQ86YR6 584 aa22.26■■□□□ 1.15
CCL3-204ENST00000613922 SMC1BQ8NDV3 1235 aa22.26■■□□□ 1.15
CCL3-204ENST00000613922 PSMD1Q99460 953 aa22.26■■□□□ 1.15
CCL3-204ENST00000613922 ZNF277Q9NRM2 450 aaPredicted RBP22.26■■□□□ 1.15
CCL3-204ENST00000613922 HYPKQ9NX55 129 aa22.26■■□□□ 1.15
CCL3-204ENST00000613922 DDX60Q8IY21 1712 aaKnown RBP22.26■■□□□ 1.15
CCL3-204ENST00000613922 ANKRD13DQ6ZTN6 518 aa22.25■■□□□ 1.15
CCL3-204ENST00000613922 SYNE4Q8N205 404 aa22.25■■□□□ 1.15
CCL3-204ENST00000613922 DDNO94850 711 aaPredicted RBP22.24■■□□□ 1.15
CCL3-204ENST00000613922 GRIPAP1Q4V328 841 aa22.24■■□□□ 1.15
CCL3-204ENST00000613922 IARSP41252 1262 aaKnown RBP22.23■■□□□ 1.15
CCL3-204ENST00000613922 CCDC27Q2M243 656 aa22.23■■□□□ 1.15
CCL3-204ENST00000613922 ISCA1Q9BUE6 129 aa22.23■■□□□ 1.15
CCL3-204ENST00000613922 TRMT112Q9UI30 125 aaKnown RBP22.23■■□□□ 1.15
CCL3-204ENST00000613922 SH3TC1Q8TE82 1336 aa22.23■■□□□ 1.15
CCL3-204ENST00000613922 TAF1P21675 1872 aa22.22■■□□□ 1.15
CCL3-204ENST00000613922 PPEF1O14829 653 aaPredicted RBP22.22■■□□□ 1.15
CCL3-204ENST00000613922 ANP32CO43423 234 aa22.21■■□□□ 1.15
CCL3-204ENST00000613922 HCLS1P14317 486 aaPredicted RBP22.21■■□□□ 1.15
CCL3-204ENST00000613922 DNAJC5GQ8N7S2 189 aa22.21■■□□□ 1.15
CCL3-204ENST00000613922 C8orf58Q8NAV2 365 aa22.21■■□□□ 1.15
CCL3-204ENST00000613922 L3MBTL3Q96JM7 780 aaPredicted RBP22.21■■□□□ 1.15
CCL3-204ENST00000613922 ABCC4O15439 1325 aa22.21■■□□□ 1.15
CCL3-204ENST00000613922 FZD9O00144 591 aa22.2■■□□□ 1.14
CCL3-204ENST00000613922 ELL2O00472 640 aaPredicted RBP22.2■■□□□ 1.14
CCL3-204ENST00000613922 NCBP3Q53F19 620 aaKnown RBP22.2■■□□□ 1.14
CCL3-204ENST00000613922 SLC51AQ86UW1 340 aa22.2■■□□□ 1.14
CCL3-204ENST00000613922 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
CCL3-204ENST00000613922 ZNF541Q9H0D2 1346 aa22.2■■□□□ 1.14
CCL3-204ENST00000613922 COL4A5P29400 1685 aa22.2■■□□□ 1.14
CCL3-204ENST00000613922 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
CCL3-204ENST00000613922 WWC1Q8IX03 1113 aa22.18■■□□□ 1.14
CCL3-204ENST00000613922 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
CCL3-204ENST00000613922 ATP6V0A2Q9Y487 856 aa22.18■■□□□ 1.14
CCL3-204ENST00000613922 ATP5J2-PTCD1G3V325 749 aa22.17■■□□□ 1.14
CCL3-204ENST00000613922 CHMP4AQ9BY43 222 aa22.17■■□□□ 1.14
CCL3-204ENST00000613922 IQCA1LA6NCM1 817 aa22.16■■□□□ 1.14
CCL3-204ENST00000613922 TCERG1O14776 1098 aaKnown RBP22.16■■□□□ 1.14
CCL3-204ENST00000613922 BBOX1O75936 387 aa22.16■■□□□ 1.14
CCL3-204ENST00000613922 GOLGA2Q08379 1002 aa22.16■■□□□ 1.14
CCL3-204ENST00000613922 CCDC30Q5VVM6 783 aa22.16■■□□□ 1.14
CCL3-204ENST00000613922 TSPYL6Q8N831 410 aa22.16■■□□□ 1.14
CCL3-204ENST00000613922 LRRC37AA6NMS7 1700 aa22.16■■□□□ 1.14
CCL3-204ENST00000613922 CACNA1FO60840 1977 aa22.16■■□□□ 1.14
CCL3-204ENST00000613922 IL16Q14005 1332 aa22.15■■□□□ 1.14
CCL3-204ENST00000613922 DDX46Q7L014 1031 aaKnown RBP22.15■■□□□ 1.14
CCL3-204ENST00000613922 RIC3Q7Z5B4 369 aa22.15■■□□□ 1.14
CCL3-204ENST00000613922 JDP2Q8WYK2 163 aa22.15■■□□□ 1.14
CCL3-204ENST00000613922 TSR2Q969E8 191 aaKnown RBP22.15■■□□□ 1.14
CCL3-204ENST00000613922 HTRA3P83110 453 aa22.14■■□□□ 1.13
CCL3-204ENST00000613922 GRAPQ13588 217 aa22.14■■□□□ 1.13
CCL3-204ENST00000613922 SP8Q8IXZ3 490 aa22.14■■□□□ 1.13
CCL3-204ENST00000613922 GRAPLQ8TC17 118 aaPredicted RBP22.14■■□□□ 1.13
CCL3-204ENST00000613922 ZNF428Q96B54 188 aa22.14■■□□□ 1.13
CCL3-204ENST00000613922 FAM89AQ96GI7 184 aa22.14■■□□□ 1.13
CCL3-204ENST00000613922 RTFDC1Q9BY42 306 aaPredicted RBP22.14■■□□□ 1.13
CCL3-204ENST00000613922 VPS33BQ9H267 617 aa22.14■■□□□ 1.13
CCL3-204ENST00000613922 TAF1DQ9H5J8 278 aaPredicted RBP22.14■■□□□ 1.13
CCL3-204ENST00000613922 ADAMTSL1Q8N6G6 1762 aa22.14■■□□□ 1.13
CCL3-204ENST00000613922 SF3B3Q15393 1217 aaKnown RBP22.13■■□□□ 1.13
CCL3-204ENST00000613922 CHADLQ6NUI6 762 aa22.13■■□□□ 1.13
CCL3-204ENST00000613922 GPC2Q8N158 579 aa22.13■■□□□ 1.13
CCL3-204ENST00000613922 TMX4Q9H1E5 349 aaPredicted RBP22.13■■□□□ 1.13
CCL3-204ENST00000613922 POTEIP0CG38 1075 aa22.12■■□□□ 1.13
CCL3-204ENST00000613922 POTEJP0CG39 1038 aa22.12■■□□□ 1.13
CCL3-204ENST00000613922 LARGE2Q8N3Y3 721 aa22.12■■□□□ 1.13
CCL3-204ENST00000613922 TMC4Q7Z404 712 aa22.11■■□□□ 1.13
CCL3-204ENST00000613922 SUPT20HQ8NEM7 779 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms