RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 DNAJC10Q8IXB1 793 aa26.48■■□□□ 1.83
POLR2J3-220ENST00000613744 C5P01031 1676 aa26.48■■□□□ 1.83
POLR2J3-220ENST00000613744 RBM27Q9P2N5 1060 aaKnown RBP26.48■■□□□ 1.83
POLR2J3-220ENST00000613744 SYCE3A1L190 88 aa26.47■■□□□ 1.83
POLR2J3-220ENST00000613744 PIP4K2AP48426 406 aaPredicted RBP26.47■■□□□ 1.83
POLR2J3-220ENST00000613744 TSPY26PQ9H489 355 aa26.46■■□□□ 1.83
POLR2J3-220ENST00000613744 GSPT1P15170 499 aaKnown RBP26.46■■□□□ 1.83
POLR2J3-220ENST00000613744 TTC22Q5TAA0 569 aa26.46■■□□□ 1.83
POLR2J3-220ENST00000613744 HDGFL1Q5TGJ6 251 aa26.46■■□□□ 1.83
POLR2J3-220ENST00000613744 FAM184AQ8NB25 1140 aa26.46■■□□□ 1.83
POLR2J3-220ENST00000613744 PIBF1Q8WXW3 757 aa26.46■■□□□ 1.83
POLR2J3-220ENST00000613744 ZDHHC9Q9Y397 364 aa26.46■■□□□ 1.83
POLR2J3-220ENST00000613744 ABCC4O15439 1325 aa26.45■■□□□ 1.83
POLR2J3-220ENST00000613744 PHF14O94880 888 aa26.45■■□□□ 1.83
POLR2J3-220ENST00000613744 PTMAP06454 111 aaKnown RBP26.45■■□□□ 1.83
POLR2J3-220ENST00000613744 ITPK1Q13572 414 aa26.45■■□□□ 1.83
POLR2J3-220ENST00000613744 CCNL1Q9UK58 526 aaPredicted RBP26.45■■□□□ 1.83
POLR2J3-220ENST00000613744 CASC1Q6TDU7 716 aa26.45■■□□□ 1.82
POLR2J3-220ENST00000613744 PLEKHM2Q8IWE5 1019 aa26.45■■□□□ 1.82
POLR2J3-220ENST00000613744 KLHL34Q8N239 644 aa26.45■■□□□ 1.82
POLR2J3-220ENST00000613744 TNS1Q9HBL0 1735 aaKnown RBP26.45■■□□□ 1.82
POLR2J3-220ENST00000613744 PKP1Q13835 747 aa26.44■■□□□ 1.82
POLR2J3-220ENST00000613744 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.44■■□□□ 1.82
POLR2J3-220ENST00000613744 LETM1O95202 739 aaPredicted RBP26.43■■□□□ 1.82
POLR2J3-220ENST00000613744 ANXA1P04083 346 aa26.43■■□□□ 1.82
POLR2J3-220ENST00000613744 SIRT2Q8IXJ6 389 aa26.43■■□□□ 1.82
POLR2J3-220ENST00000613744 EN1Q05925 392 aaPredicted RBP26.42■■□□□ 1.82
POLR2J3-220ENST00000613744 SF3B2Q13435 895 aaKnown RBP26.42■■□□□ 1.82
POLR2J3-220ENST00000613744 MRPL50Q8N5N7 158 aaKnown RBP26.42■■□□□ 1.82
POLR2J3-220ENST00000613744 LRRC4BQ9NT99 713 aa26.42■■□□□ 1.82
POLR2J3-220ENST00000613744 A1BGP04217 495 aa26.42■■□□□ 1.82
POLR2J3-220ENST00000613744 DEFB132Q7Z7B7 95 aa26.42■■□□□ 1.82
POLR2J3-220ENST00000613744 PROM2Q8N271 834 aa26.42■■□□□ 1.82
POLR2J3-220ENST00000613744 MCM2P49736 904 aa26.4■■□□□ 1.82
POLR2J3-220ENST00000613744 CHPF2Q9P2E5 772 aa26.4■■□□□ 1.82
POLR2J3-220ENST00000613744 REC8O95072 547 aa26.4■■□□□ 1.82
POLR2J3-220ENST00000613744 HOXB7P09629 217 aa26.4■■□□□ 1.82
POLR2J3-220ENST00000613744 TXNRD1Q16881 649 aa26.4■■□□□ 1.82
POLR2J3-220ENST00000613744 LY75O60449 1722 aa26.4■■□□□ 1.82
POLR2J3-220ENST00000613744 TJP1Q07157 1748 aa26.39■■□□□ 1.82
POLR2J3-220ENST00000613744 LINC00116Q8NCU8 138 aa26.39■■□□□ 1.82
POLR2J3-220ENST00000613744 DCTPP1Q9H773 170 aa26.39■■□□□ 1.82
POLR2J3-220ENST00000613744 PLSCR1O15162 318 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 SLC4A2P04920 1241 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 CYP19A1P11511 503 aaPredicted RBP26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 MYL6BP14649 208 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 EZH2Q15910 746 aaKnown RBP26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 PROSER3Q2NL68 480 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 CCDC30Q5VVM6 783 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 PRDM10Q9NQV6 1147 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 SPTLC3Q9NUV7 552 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 DNTTIP2Q5QJE6 756 aaKnown RBP26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 ZGPATQ8N5A5 531 aaKnown RBP26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 STK31Q9BXU1 1019 aa26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 ZHX1Q9UKY1 873 aaPredicted RBP26.38■■□□□ 1.81
POLR2J3-220ENST00000613744 ZNF710Q8N1W2 664 aa26.37■■□□□ 1.81
POLR2J3-220ENST00000613744 STARD3NLO95772 234 aa26.37■■□□□ 1.81
POLR2J3-220ENST00000613744 NOLC1Q14978 699 aaKnown RBP eCLIP26.37■■□□□ 1.81
POLR2J3-220ENST00000613744 TEX13AQ9BXU3 409 aaPredicted RBP26.37■■□□□ 1.81
POLR2J3-220ENST00000613744 ZNF330Q9Y3S2 320 aaPredicted RBP26.37■■□□□ 1.81
POLR2J3-220ENST00000613744 BRD1O95696 1058 aa26.36■■□□□ 1.81
POLR2J3-220ENST00000613744 KIF3AQ9Y496 699 aa26.36■■□□□ 1.81
POLR2J3-220ENST00000613744 API5Q9BZZ5 524 aaKnown RBP26.35■■□□□ 1.81
POLR2J3-220ENST00000613744 CRKLP46109 303 aaKnown RBP26.35■■□□□ 1.81
POLR2J3-220ENST00000613744 SOS1Q07889 1333 aaPredicted RBP26.35■■□□□ 1.81
POLR2J3-220ENST00000613744 NBPF26B4DH59 902 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 FKBP5Q13451 457 aaPredicted RBP26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 PDIA6Q15084 440 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 NBPF14Q5TI25 921 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 NBPF10Q6P3W6 841 aaKnown RBP26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 SMIM5Q71RC9 77 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 NBPF15Q8N660 670 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 ZBTB1Q9Y2K1 713 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 LAMB4A4D0S4 1761 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 BAG6P46379 1132 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 G2E3Q7L622 706 aa26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 UPF1Q92900 1129 aaKnown RBP eCLIP26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 PHAXQ9H814 394 aaKnown RBP26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 NSFL1CQ9UNZ2 370 aaKnown RBP26.34■■□□□ 1.81
POLR2J3-220ENST00000613744 TAF3Q5VWG9 929 aa26.33■■□□□ 1.81
POLR2J3-220ENST00000613744 CAMKK2Q96RR4 588 aa26.33■■□□□ 1.81
POLR2J3-220ENST00000613744 C1orf115Q9H7X2 142 aa26.33■■□□□ 1.81
POLR2J3-220ENST00000613744 SLC27A3Q5K4L6 730 aa26.32■■□□□ 1.8
POLR2J3-220ENST00000613744 INTS4Q96HW7 963 aaKnown RBP26.32■■□□□ 1.8
POLR2J3-220ENST00000613744 DBF4Q9UBU7 674 aaPredicted RBP26.32■■□□□ 1.8
POLR2J3-220ENST00000613744 INTS5Q6P9B9 1019 aaKnown RBP26.32■■□□□ 1.8
POLR2J3-220ENST00000613744 RNF214Q8ND24 703 aa26.32■■□□□ 1.8
POLR2J3-220ENST00000613744 AIMP1Q12904 312 aaKnown RBP26.31■■□□□ 1.8
POLR2J3-220ENST00000613744 CUL4AQ13619 759 aa26.31■■□□□ 1.8
POLR2J3-220ENST00000613744 CCDC87Q9NVE4 849 aa26.3■■□□□ 1.8
POLR2J3-220ENST00000613744 DDX21Q9NR30 783 aaKnown RBP eCLIP26.3■■□□□ 1.8
POLR2J3-220ENST00000613744 MYH14Q7Z406 1995 aaKnown RBP26.3■■□□□ 1.8
POLR2J3-220ENST00000613744 TAF1LQ8IZX4 1826 aa26.29■■□□□ 1.8
POLR2J3-220ENST00000613744 TPM3P06753 285 aa26.29■■□□□ 1.8
POLR2J3-220ENST00000613744 ARID3AQ99856 593 aa26.29■■□□□ 1.8
POLR2J3-220ENST00000613744 DIAPH3Q9NSV4 1193 aa26.29■■□□□ 1.8
POLR2J3-220ENST00000613744 COL5A3P25940 1745 aaPredicted RBP26.29■■□□□ 1.8
POLR2J3-220ENST00000613744 CCDC125Q86Z20 511 aa26.29■■□□□ 1.8
POLR2J3-220ENST00000613744 ERC2O15083 957 aa26.28■■□□□ 1.8
POLR2J3-220ENST00000613744 PPP4R3BQ5MIZ7 849 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms