RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
CSTF1-208ENST00000613138 ADCY9O60503 1353 aa16.37■□□□□ 0.21
CSTF1-208ENST00000613138 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
CSTF1-208ENST00000613138 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
CSTF1-208ENST00000613138 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
CSTF1-208ENST00000613138 PLBD2Q8NHP8 589 aa16.36■□□□□ 0.21
CSTF1-208ENST00000613138 COL4A1P02462 1669 aa16.35■□□□□ 0.21
CSTF1-208ENST00000613138 KLRG2A4D1S0 409 aaPredicted RBP16.35■□□□□ 0.21
CSTF1-208ENST00000613138 HCLS1P14317 486 aaPredicted RBP16.35■□□□□ 0.21
CSTF1-208ENST00000613138 RTL5Q5HYW3 569 aaPredicted RBP16.35■□□□□ 0.21
CSTF1-208ENST00000613138 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
CSTF1-208ENST00000613138 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
CSTF1-208ENST00000613138 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
CSTF1-208ENST00000613138 MASTLQ96GX5 879 aa16.35■□□□□ 0.21
CSTF1-208ENST00000613138 NFKBIEO00221 500 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 VAMP4O75379 141 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 STYK1Q6J9G0 422 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 ISCA1Q9BUE6 129 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
CSTF1-208ENST00000613138 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 CACNA1FO60840 1977 aa16.34■□□□□ 0.21
CSTF1-208ENST00000613138 PARP10Q53GL7 1025 aa16.33■□□□□ 0.2
CSTF1-208ENST00000613138 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
CSTF1-208ENST00000613138 MYD88Q99836 296 aa16.33■□□□□ 0.2
CSTF1-208ENST00000613138 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
CSTF1-208ENST00000613138 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
CSTF1-208ENST00000613138 NPR1P16066 1061 aa16.32■□□□□ 0.2
CSTF1-208ENST00000613138 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
CSTF1-208ENST00000613138 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
CSTF1-208ENST00000613138 TRMT112Q9UI30 125 aaKnown RBP16.32■□□□□ 0.2
CSTF1-208ENST00000613138 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
CSTF1-208ENST00000613138 SLC4A2P04920 1241 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 GOLGA2Q08379 1002 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 CRY2Q49AN0 593 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 C7orf43Q8WVR3 580 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 CNKSR1Q969H4 720 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 MAP3K2Q9Y2U5 619 aa16.31■□□□□ 0.2
CSTF1-208ENST00000613138 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
CSTF1-208ENST00000613138 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
CSTF1-208ENST00000613138 RIC1Q4ADV7 1423 aa16.29■□□□□ 0.2
CSTF1-208ENST00000613138 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
CSTF1-208ENST00000613138 MYH16Q9H6N6 1097 aa16.29■□□□□ 0.2
CSTF1-208ENST00000613138 PDZRN3Q9UPQ7 1066 aa16.29■□□□□ 0.2
CSTF1-208ENST00000613138 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
CSTF1-208ENST00000613138 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
CSTF1-208ENST00000613138 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
CSTF1-208ENST00000613138 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
CSTF1-208ENST00000613138 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
CSTF1-208ENST00000613138 SLFN5Q08AF3 891 aa16.27■□□□□ 0.2
CSTF1-208ENST00000613138 FLIIQ13045 1269 aa16.27■□□□□ 0.2
CSTF1-208ENST00000613138 CWF19L2Q2TBE0 894 aaKnown RBP16.27■□□□□ 0.2
CSTF1-208ENST00000613138 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
CSTF1-208ENST00000613138 ABCC4O15439 1325 aa16.26■□□□□ 0.19
CSTF1-208ENST00000613138 F6X3S4 739 aa16.26■□□□□ 0.19
CSTF1-208ENST00000613138 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
CSTF1-208ENST00000613138 NLRP3Q96P20 1036 aa16.26■□□□□ 0.19
CSTF1-208ENST00000613138 SNED1Q8TER0 1413 aa16.26■□□□□ 0.19
CSTF1-208ENST00000613138 SPEF2Q9C093 1822 aa16.25■□□□□ 0.19
CSTF1-208ENST00000613138 NMRK2Q9NPI5 230 aa16.25■□□□□ 0.19
CSTF1-208ENST00000613138 ZNF277Q9NRM2 450 aaPredicted RBP16.25■□□□□ 0.19
CSTF1-208ENST00000613138 MYH3P11055 1940 aa16.25■□□□□ 0.19
CSTF1-208ENST00000613138 COL4A5P29400 1685 aa16.24■□□□□ 0.19
CSTF1-208ENST00000613138 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
CSTF1-208ENST00000613138 DDX58O95786 925 aaKnown RBP16.24■□□□□ 0.19
CSTF1-208ENST00000613138 LMNB1P20700 586 aa16.24■□□□□ 0.19
CSTF1-208ENST00000613138 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
CSTF1-208ENST00000613138 FKBP5Q13451 457 aaPredicted RBP16.24■□□□□ 0.19
CSTF1-208ENST00000613138 RBM17Q96I25 401 aaKnown RBP16.24■□□□□ 0.19
CSTF1-208ENST00000613138 CCDC85AQ96PX6 553 aaPredicted RBP16.24■□□□□ 0.19
CSTF1-208ENST00000613138 TAOK3Q9H2K8 898 aa16.24■□□□□ 0.19
CSTF1-208ENST00000613138 GPBP1L1Q9HC44 474 aaPredicted RBP16.24■□□□□ 0.19
CSTF1-208ENST00000613138 E9PSI1 815 aa16.23■□□□□ 0.19
CSTF1-208ENST00000613138 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
CSTF1-208ENST00000613138 ALDH1B1P30837 517 aa16.23■□□□□ 0.19
CSTF1-208ENST00000613138 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
CSTF1-208ENST00000613138 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
CSTF1-208ENST00000613138 BCL2L13Q9BXK5 485 aa16.23■□□□□ 0.19
CSTF1-208ENST00000613138 CWC25Q9NXE8 425 aaPredicted RBP16.23■□□□□ 0.19
CSTF1-208ENST00000613138 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
CSTF1-208ENST00000613138 NEURL1BA8MQ27 555 aa16.22■□□□□ 0.19
CSTF1-208ENST00000613138 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
CSTF1-208ENST00000613138 CHMP4AQ9BY43 222 aa16.22■□□□□ 0.19
CSTF1-208ENST00000613138 PCCAP05165 728 aaPredicted RBP16.21■□□□□ 0.19
CSTF1-208ENST00000613138 TRMT2AQ8IZ69 625 aaKnown RBP16.21■□□□□ 0.19
CSTF1-208ENST00000613138 CCDC191Q8NCU4 936 aa16.21■□□□□ 0.19
CSTF1-208ENST00000613138 DNAAF4Q8WXU2 420 aa16.21■□□□□ 0.19
CSTF1-208ENST00000613138 CELF1Q92879 486 aaKnown RBP16.21■□□□□ 0.19
CSTF1-208ENST00000613138 SEC31BQ9NQW1 1179 aa16.21■□□□□ 0.19
CSTF1-208ENST00000613138 LTBP3Q9NS15 1303 aa16.2■□□□□ 0.18
CSTF1-208ENST00000613138 KIF3CO14782 793 aa16.2■□□□□ 0.18
CSTF1-208ENST00000613138 FKBP4Q02790 459 aaKnown RBP eCLIP16.2■□□□□ 0.18
CSTF1-208ENST00000613138 MRPL50Q8N5N7 158 aaKnown RBP16.2■□□□□ 0.18
CSTF1-208ENST00000613138 SSH1Q8WYL5 1049 aa16.2■□□□□ 0.18
CSTF1-208ENST00000613138 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
CSTF1-208ENST00000613138 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
CSTF1-208ENST00000613138 UBE3BQ7Z3V4 1068 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms