RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 SYCE3A1L190 88 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 NBPF26B4DH59 902 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 NBPF14Q5TI25 921 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 NBPF10Q6P3W6 841 aaKnown RBP16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 TTLL7Q6ZT98 887 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 TOM1L2Q6ZVM7 507 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 NBPF15Q8N660 670 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 RBSNQ9H1K0 784 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 TCHHQ07283 1943 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 PTMSP20962 102 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 TFCP2Q12800 502 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 SLFNL1Q499Z3 407 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 BRINP3Q76B58 766 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 ERC1Q8IUD2 1116 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 RPAP1Q9BWH6 1393 aaPredicted RBP16.99■□□□□ 0.31
PCDHGA3-202ENST00000612467 A0A087WZG4 1122 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 A1BGP04217 495 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 NASPP49321 788 aaPredicted RBP16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 CCDC83Q8IWF9 413 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 FSD1Q9BTV5 496 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 STRN4Q9NRL3 753 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 NECAB1Q8N987 351 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 EVI5LQ96CN4 794 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 GPATCH3Q96I76 525 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 RBM8AQ9Y5S9 174 aaKnown RBP16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 KCNJ4P48050 445 aa16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
PCDHGA3-202ENST00000612467 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
PCDHGA3-202ENST00000612467 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
PCDHGA3-202ENST00000612467 INTS4Q96HW7 963 aaKnown RBP16.97■□□□□ 0.31
PCDHGA3-202ENST00000612467 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
PCDHGA3-202ENST00000612467 RFX5P48382 616 aaPredicted RBP16.97■□□□□ 0.31
PCDHGA3-202ENST00000612467 ZBTB3Q9H5J0 574 aa16.97■□□□□ 0.31
PCDHGA3-202ENST00000612467 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
PCDHGA3-202ENST00000612467 ST3GAL1Q11201 340 aa16.96■□□□□ 0.31
PCDHGA3-202ENST00000612467 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
PCDHGA3-202ENST00000612467 CCDC129Q6ZRS4 1044 aa16.96■□□□□ 0.3
PCDHGA3-202ENST00000612467 DNAJC2Q99543 621 aaKnown RBP16.96■□□□□ 0.3
PCDHGA3-202ENST00000612467 DBNDD2Q9BQY9 259 aa16.96■□□□□ 0.3
PCDHGA3-202ENST00000612467 RNF214Q8ND24 703 aa16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 LIMCH1Q9UPQ0 1083 aa16.95■□□□□ 0.3
PCDHGA3-202ENST00000612467 AFDNP55196 1824 aaKnown RBP16.94■□□□□ 0.3
PCDHGA3-202ENST00000612467 ZNF445P59923 1031 aa16.94■□□□□ 0.3
PCDHGA3-202ENST00000612467 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
PCDHGA3-202ENST00000612467 RUFY2Q8WXA3 655 aa16.94■□□□□ 0.3
PCDHGA3-202ENST00000612467 ZNF594Q96JF6 807 aaPredicted RBP16.94■□□□□ 0.3
PCDHGA3-202ENST00000612467 SYT1P21579 422 aa16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 ME3Q16798 604 aa16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 CCDC85AQ96PX6 553 aaPredicted RBP16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 COL15A1P39059 1388 aa16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 TNNI3KQ59H18 835 aa16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 FPGT-TNNI3KV9GXZ4 949 aa16.93■□□□□ 0.3
PCDHGA3-202ENST00000612467 SLC27A2O14975 620 aa16.92■□□□□ 0.3
PCDHGA3-202ENST00000612467 ISY1Q9ULR0 285 aaKnown RBP16.92■□□□□ 0.3
PCDHGA3-202ENST00000612467 ZNF335Q9H4Z2 1342 aaPredicted RBP16.92■□□□□ 0.3
PCDHGA3-202ENST00000612467 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
PCDHGA3-202ENST00000612467 HDAC5Q9UQL6 1122 aa16.92■□□□□ 0.3
PCDHGA3-202ENST00000612467 GJB2P29033 226 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 CASP7P55210 303 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 SMC3Q9UQE7 1217 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 ARFGEF2Q9Y6D5 1785 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 GLI3P10071 1580 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 TRIM44Q96DX7 344 aaPredicted RBP16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 ZSWIM6Q9HCJ5 1215 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 COPRSQ9NQ92 184 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
PCDHGA3-202ENST00000612467 TIMM10P62072 90 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 STK3Q13188 491 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 PLBD2Q8NHP8 589 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 MRC1P22897 1456 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 WDR33Q9C0J8 1336 aaKnown RBP16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 FIBPO43427 364 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 STX6O43752 255 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 NEUROD6Q96NK8 337 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 XIRP1Q702N8 1843 aaKnown RBP16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 ESPNB1AK53 854 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 FOXO4P98177 505 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 FAM173BQ6P4H8 233 aa16.9■□□□□ 0.3
PCDHGA3-202ENST00000612467 EPB41L2O43491 1005 aaKnown RBP16.89■□□□□ 0.29
PCDHGA3-202ENST00000612467 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
PCDHGA3-202ENST00000612467 KAT6BQ8WYB5 2073 aa16.89■□□□□ 0.29
PCDHGA3-202ENST00000612467 PKD1L3Q7Z443 1732 aa16.89■□□□□ 0.29
PCDHGA3-202ENST00000612467 ZSCAN22P10073 491 aaPredicted RBP16.89■□□□□ 0.29
PCDHGA3-202ENST00000612467 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms