RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 COL4A5P29400 1685 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 GNAI1P63096 354 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 CRY2Q49AN0 593 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 TPTE2Q6XPS3 522 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 G2E3Q7L622 706 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 NLRP10Q86W26 655 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
SNCA-212ENST00000611107 ATP5J2-PTCD1G3V325 749 aa11.24□□□□□ -0.61
SNCA-212ENST00000611107 HOXB7P09629 217 aa11.24□□□□□ -0.61
SNCA-212ENST00000611107 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
SNCA-212ENST00000611107 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
SNCA-212ENST00000611107 NPHP1O15259 732 aa11.23□□□□□ -0.61
SNCA-212ENST00000611107 HCLS1P14317 486 aaPredicted RBP11.23□□□□□ -0.61
SNCA-212ENST00000611107 C1QTNF8P60827 252 aa11.23□□□□□ -0.61
SNCA-212ENST00000611107 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
SNCA-212ENST00000611107 FANCIQ9NVI1 1328 aa11.23□□□□□ -0.61
SNCA-212ENST00000611107 IBTKQ9P2D0 1353 aaPredicted RBP11.23□□□□□ -0.61
SNCA-212ENST00000611107 NPR1P16066 1061 aa11.22□□□□□ -0.61
SNCA-212ENST00000611107 IL16Q14005 1332 aa11.22□□□□□ -0.61
SNCA-212ENST00000611107 RIC1Q4ADV7 1423 aa11.22□□□□□ -0.61
SNCA-212ENST00000611107 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
SNCA-212ENST00000611107 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
SNCA-212ENST00000611107 CNKSR1Q969H4 720 aa11.22□□□□□ -0.61
SNCA-212ENST00000611107 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
SNCA-212ENST00000611107 DBF4Q9UBU7 674 aaPredicted RBP11.22□□□□□ -0.61
SNCA-212ENST00000611107 POTECB2RU33 542 aa11.21□□□□□ -0.61
SNCA-212ENST00000611107 CALD1Q05682 793 aaKnown RBP11.21□□□□□ -0.61
SNCA-212ENST00000611107 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
SNCA-212ENST00000611107 SLC10A5Q5PT55 438 aa11.21□□□□□ -0.61
SNCA-212ENST00000611107 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
SNCA-212ENST00000611107 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.61
SNCA-212ENST00000611107 MYH3P11055 1940 aa11.2□□□□□ -0.62
SNCA-212ENST00000611107 VAMP4O75379 141 aa11.2□□□□□ -0.62
SNCA-212ENST00000611107 LMNB1P20700 586 aa11.2□□□□□ -0.62
SNCA-212ENST00000611107 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
SNCA-212ENST00000611107 HOXA10P31260 410 aaPredicted RBP11.2□□□□□ -0.62
SNCA-212ENST00000611107 EXOSC9Q06265 439 aaKnown RBP11.2□□□□□ -0.62
SNCA-212ENST00000611107 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
SNCA-212ENST00000611107 PARP10Q53GL7 1025 aa11.2□□□□□ -0.62
SNCA-212ENST00000611107 NYXQ9GZU5 481 aa11.2□□□□□ -0.62
SNCA-212ENST00000611107 ZNF277Q9NRM2 450 aaPredicted RBP11.2□□□□□ -0.62
SNCA-212ENST00000611107 HYPKQ9NX55 129 aa11.2□□□□□ -0.62
SNCA-212ENST00000611107 ABCC4O15439 1325 aa11.19□□□□□ -0.62
SNCA-212ENST00000611107 IGKV5-2P06315 115 aa11.19□□□□□ -0.62
SNCA-212ENST00000611107 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
SNCA-212ENST00000611107 MYD88Q99836 296 aa11.19□□□□□ -0.62
SNCA-212ENST00000611107 RRAGCQ9HB90 399 aa11.19□□□□□ -0.62
SNCA-212ENST00000611107 TRMT112Q9UI30 125 aaKnown RBP11.19□□□□□ -0.62
SNCA-212ENST00000611107 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
SNCA-212ENST00000611107 LTBP3Q9NS15 1303 aa11.18□□□□□ -0.62
SNCA-212ENST00000611107 WDR63Q8IWG1 891 aa11.18□□□□□ -0.62
SNCA-212ENST00000611107 TAOK3Q9H2K8 898 aa11.18□□□□□ -0.62
SNCA-212ENST00000611107 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
SNCA-212ENST00000611107 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 DUOX1Q9NRD9 1551 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 CCDC30Q5VVM6 783 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 CRAMP1Q96RY5 1269 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 MAP3K2Q9Y2U5 619 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
SNCA-212ENST00000611107 SPEF2Q9C093 1822 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 SH3TC1Q8TE82 1336 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 PI4KAP2A4QPH2 592 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
SNCA-212ENST00000611107 SLC4A2P04920 1241 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 POTEIP0CG38 1075 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 POTEJP0CG39 1038 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 HNRNPUQ00839 825 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNCA-212ENST00000611107 FKBP4Q02790 459 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNCA-212ENST00000611107 TRIM28Q13263 835 aaKnown RBP11.16□□□□□ -0.62
SNCA-212ENST00000611107 CWF19L2Q2TBE0 894 aaKnown RBP11.16□□□□□ -0.62
SNCA-212ENST00000611107 CCDC93Q567U6 631 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 HSP90AB3PQ58FF7 597 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 RIC3Q7Z5B4 369 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 PI4KAP1Q8N8J0 262 aa11.16□□□□□ -0.62
SNCA-212ENST00000611107 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
SNCA-212ENST00000611107 METTL22Q9BUU2 404 aaPredicted RBP11.16□□□□□ -0.62
SNCA-212ENST00000611107 ZBED9Q6R2W3 1325 aa11.15□□□□□ -0.62
SNCA-212ENST00000611107 GLTPD2A6NH11 291 aa11.15□□□□□ -0.62
SNCA-212ENST00000611107 PPEF1O14829 653 aaPredicted RBP11.15□□□□□ -0.62
SNCA-212ENST00000611107 ALDH1B1P30837 517 aa11.15□□□□□ -0.62
SNCA-212ENST00000611107 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.62
SNCA-212ENST00000611107 RBM17Q96I25 401 aaKnown RBP11.15□□□□□ -0.62
SNCA-212ENST00000611107 NLRP3Q96P20 1036 aa11.15□□□□□ -0.62
SNCA-212ENST00000611107 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
SNCA-212ENST00000611107 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
SNCA-212ENST00000611107 F6X3S4 739 aa11.14□□□□□ -0.63
SNCA-212ENST00000611107 IRS4O14654 1257 aaPredicted RBP11.14□□□□□ -0.63
SNCA-212ENST00000611107 HTRA3P83110 453 aa11.14□□□□□ -0.63
SNCA-212ENST00000611107 GOLGA2Q08379 1002 aa11.14□□□□□ -0.63
SNCA-212ENST00000611107 KSR2Q6VAB6 950 aa11.14□□□□□ -0.63
SNCA-212ENST00000611107 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
SNCA-212ENST00000611107 IARSP41252 1262 aaKnown RBP11.13□□□□□ -0.63
SNCA-212ENST00000611107 SLFN5Q08AF3 891 aa11.13□□□□□ -0.63
SNCA-212ENST00000611107 FLIIQ13045 1269 aa11.13□□□□□ -0.63
SNCA-212ENST00000611107 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
SNCA-212ENST00000611107 ZBTB38Q8NAP3 1195 aaPredicted RBP11.13□□□□□ -0.63
SNCA-212ENST00000611107 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms